| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF008M06 | Sequence | 773 | 011375 (6) | ref|XP_009365390.1| | 3e-57 | PREDICTED: tyrosine-sulfated glycopeptide receptor 1-like [Pyrus x bretschneide | |||||
| JMSF012H14 | Sequence | 425 | 000862 (3) | ref|XP_008376669.1| | 1e-13 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 | 728 | 011375 (6) | ref|XP_008226203.1| | 1e-37 | PREDICTED: receptor-like protein 12 [Prunus mume] |
| JMSF034J24 | Sequence | 670 | 000862 (3) | gb|EEE54949.1| | 1e-23 | hypothetical protein OsJ_02519 [Oryza sativa Japonica Group] | 676 | 011375 (6) | emb|CAN63562.1| | 1e-26 | hypothetical protein VITISV_037178 [Vitis vinifera] |
| JMSF035J24 | Sequence | 668 | 000862 (3) | gb|EEE54949.1| | 1e-23 | hypothetical protein OsJ_02519 [Oryza sativa Japonica Group] | 536 | 011375 (6) | ref|XP_010672172.1| | 8e-13 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 |
| JMSF036K10 | Sequence | 712 | 003666 (2) | ref|XP_010068694.1| | 6e-19 | PREDICTED: leucine-rich repeat receptor protein kinase EXS-like [Eucalyptus gra | 697 | 011375 (6) | emb|CAN63562.1| | 3e-34 | hypothetical protein VITISV_037178 [Vitis vinifera] |
| JMSF045E11 | Sequence | 770 | 017934 | ref|XP_009340370.1| | 4e-27 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 | 780 | 011375 (6) | ref|XP_009365390.1| | 3e-52 | PREDICTED: tyrosine-sulfated glycopeptide receptor 1-like [Pyrus x bretschneide |
This contig is upended
. : . : . : . : . : . :
rJMSF008M06+ GAACCTCAGATTCATGAAGCTCATTGATCTCTCAAGCAATAAATTGGTTGGAGAAA
____________________________________________________________
consensus GAACCTCAGATTCATGAAGCTCATTGATCTCTCAAGCAATAAATTGGTTGGAGAAA
. : . : . : . : . : . :
rJMSF008M06+ TCCCAGNTGAGATAACTGATTTGCATATGCTTAATTCACTAAACCTGTCAAGAANCAAAC
rJMSF045E11+ TGAGATAACTGATTTGCATATGCTTAATTCACTAAACCTGTCAAGAAACAAAC
____________________________________________________________
consensus TCCCAGNTGAGATAACTGATTTGCATATGCTTAATTCACTAAACCTGTCAAGAAACAAAC
. : . : . : . : . : . :
rJMSF008M06+ TGACCGGATCCATCCCAGATAAGATTGGTGAGATGAGGTCACTAGAGAGTCTCGACCTGT
rJMSF045E11+ TGACCGGATCCATCCCAGATAAGATTGGTGAGATGAGGTCACTAGAGAGTCTCGACCTGT
rJMSF012H14+ GGTGAGATGAGGTCGCTAGAGAATCTCGACCTCT
____________________________________________________________
consensus TGACCGGATCCATCCCAGATAAGATTGGTGAGATGAGGTCACTAGAGAGTCTCGACCTGT
. : . : . : . : . : . :
rJMSF008M06+ CAAACAATCAACTTTCTGGAGCAATACCACCGAGCCTGGCTAGTATATCATTTCTTGCTC
rJMSF045E11+ CAAACAATCAACTTTCTGGAGCAATACCACCGAGCCTGGCTAGTATATCATTTCTTGCTC
rJMSF012H14+ CAAACAATCAACNTTCTGGAGCAATACCAATGAGCTTTGCTAGTTTATCATTTCTTGCTC
rJMSF036K10+ CAATCAACTTTCTGGAGCAATACCACCGAGCCTGGCTAGTATATCATTTCTTGCTC
____________________________________________________________
consensus CAAACAATCAACTTTCTGGAGCAATACCACCGAGCCTGGCTAGTATATCATTTCTTGCTC
. : . : . : . : . : . :
rJMSF008M06+ ACTTGGACTTGTCGAACAACAATTTGTCTGGTTGTATTCCACTCGGCACTCAGTTGCAAG
rJMSF045E11+ ACTTGGACTTGTCGAACAACAATTTGTCTGGTTGTATTCCACTCGGCACTCAGTTGCAAG
rJMSF012H14+ ACTTGGACTNGTCGAACAACAATTTGTCTGGTTGTATTCCACTCGGCACTCAGTTGCAAG
rJMSF034J24+ GTCGAACAACAATTTGTCTGGTTGTATTCCACTCGGCACTCAGTTGCAAG
rJMSF036K10+ ACTTGGACTNGTCGAACAACAATTNGTCTGGTTGTATTCCACTCGGCACTCAGTTGCAAG
____________________________________________________________
consensus ACTTGGACTTGTCGAACAACAATTTGTCTGGTTGTATTCCACTCGGCACTCAGTTGCAAG
. : . : . : . : . : . :
rJMSF008M06+ GATTCACTGAGGCTTATGAGGGAAATTCAAAGCTACGAGGGCCTCCACTTCCAACAAAGT
rJMSF045E11+ GATTCACTGAGGCTTATGAGGGAAATTCAAAGCTACGAGGGCCTCCACTTCCAACAAAGT
rJMSF012H14+ GATTCACAGAGGCTTATCAGGGAAATTCAAAGCTACGAGGGCCTCCACTTCCAACAAACT
rJMSF034J24+ GATTCACTGAGGCTTATCAGGGAAATTCAAAGCTACGAGGGTCTCCACTTCCAACAAAGT
rJMSF036K10+ GATTCACTGAGGCTTATGAGGGAAATTCAAAGCTACGAGGGCCTCCACTTCCAACAAAGT
____________________________________________________________
consensus GATTCACTGAGGCTTATGAGGGAAATTCAAAGCTACGAGGGCCTCCACTTCCAACAAAGT
. : . : . : . : . : . :
rJMSF008M06+ GTCATAGAGATGAACCTGAAAATGCTCCACAACAAGGGGGAATTGA--------------
rJMSF045E11+ GTCATAGAGATGAACCTGAAAATGCTCCACAACAAGGGGGAATTGA--------------
rJMSF012H14+ GTCATAGAGATGAACCTGGAAATGCTCCACAACAAGGGGGAATTGATGAAATTGAAGAAG
rJMSF035J24+ G
rJMSF034J24+ GTCATAGAGATGAACCTGGAAATGCTCCACAACAAGGGGGAATTGATGAAATTGAAGAAG
rJMSF036K10+ GTCATAGAGATGAACCTGAAAATGCTCCACAACAAGGGGGAATTGA--------------
____________________________________________________________
consensus GTCATAGAGATGAACCTGAAAATGCTCCACAACAAGGGGGAATTGA-------------G
. : . : . : . : . : . :
rJMSF008M06+ -TGAAGGATGGATTATTTGGGACTTTGACTTTTTTGTGAGTTTGACACTTGGATTCATTG
rJMSF045E11+ -TGAAGGATGGATTATTTGGGACTTTGACTTTTTTGTGAGTTTGACACTTGGATTCATTG
rJMSF012H14+ ATGAAGGATGGATTATTTGGGACTTTGACTTCTTTGTGAGTTTGATACTTGGATTCATTC
rJMSF035J24+ ATGAAGGATGGATTATTTGGGACTTTGATTTCTTTGTGAGTTTGACACTTGGATTCATTC
rJMSF034J24+ ATGAAGGATGGATTATTTGGGACTTTGATTTCTTTGTGAGTTTGACACTTGGATTCATTC
rJMSF036K10+ -TGAAGGATGGATTATTTGGGACTTTGACTTTTTTGTGAGTTTGACACTTGGATTCATTG
____________________________________________________________
consensus ATGAAGGATGGATTATTTGGGACTTTGACTTTTTTGTGAGTTTGACACTTGGATTCATTG
. : . : . : . : . : . :
rJMSF008M06+ TTAGTTNTTGGGGAGTATGTGGAACATTAATACTCAAGTCTTCTNGGCGACATGCGTATT
rJMSF045E11+ TTAGTTTTTGGGGAGTATGTGGAACATTAATACTCAAGTCTTCTTGGCGACATGCGTATT
rJMSF012H14+ TTGGTTTTTGGGGAGTATGCGGAACCTTAATACTCAAGCGTTCTTGGAGACATGCATACT
rJMSF035J24+ TTGGTTTNTGGGGAGTATGCGGAACATTAATACTCAAGCATTCTTGGAGACANGCATATT
rJMSF034J24+ TTGGTTTTTGGGGAGTATGCGGAACATTAATACTCAAGCATTCTTGGAGACATGCATATT
rJMSF036K10+ TTAGTTTTTGGGGAGTACGTGGAACATTAATACTCAAGTCTTCTTGGCGACATGCGTATT
____________________________________________________________
consensus TTGGTTTTTGGGGAGTATGTGGAACATTAATACTCAAGTCTTCTTGGCGACATGCGTATT
. : . : . : . : . : . :
rJMSF008M06+ TCCAATTTTTAGAAGACAAAAAAGAGAAGATTTGCACTGCCATTGTGGTCCTTGGAGCCA
rJMSF045E11+ TCCAATTTTTAGAAGACAAAAAAGAGAAGATTTGCACTGCCATTGTGGTCCTTGGAGCCA
rJMSF012H14+ TCCAATTTTTAGAAGACAAAAAAGAGAAGTTTTGCACNGCCATTGTAATCTATGGAGCCA
rJMSF035J24+ TCCAATTTTTAGAAGACAAAAAGGAGAAGCTTTGCACTACCATAGTAGTCTACGGAGCCA
rJMSF034J24+ TCCAATTTTTAGAAGACAAAAAGGAGAAGCTTTGCACTACCATAGTAGTCTACGGAGCCA
rJMSF036K10+ TCCAATTTTTAGAAGACAAAAAAGAGAAGATTTGCACTGCCATTGTGGTCCTTGGAGCCA
____________________________________________________________
consensus TCCAATTTTTAGAAGACAAAAAAGAGAAGATTTGCACTGCCATTGTGGTCTTTGGAGCCA
. : . : . : . : . : . :
rJMSF008M06+ AATTGAAGAGAGGCATG
rJMSF045E11+ AATTGAAGAGAGGCATG
rJMSF012H14+ AATTGAAGAGAGGCATGGGAG----TTAGCTAGATTGAAGTAAAAGG
rJMSF035J24+ AATNGAAGAGAGGCATGGGAG----TTAGCTAGATTGGAATAAAAGGTAAGATGATTGAG
rJMSF034J24+ AATTGAAGAGAGGCATGGGAG----TTAGCTAGATTGGAATAAAAGGTAAGATGATTGAG
rJMSF036K10+ AATTGAAGAGAGGCATGAGAGCTAACTAGCTCGATTGAAGTAAAAGGTAATATAATTAAG
____________________________________________________________
consensus AATTGAAGAGAGGCATGGGAG----TTAGCTAGATTGGAGTAAAAGGTAAGATGATTGAG
. : . : . : . : . : . :
rJMSF035J24+ ATTCTAAATTTTTNTCATTTGAAATTATAATATATTTTTATTTAGCAATAAAGANTAATA
rJMSF034J24+ ATTCTAAATTTTTTTCATTTGAAATTATAATATATTTTTATTTAGCAATAAAGATTAATA
rJMSF036K10+ ATTCTAAAA--TTTTCATTTGAAATTACAATATTTTTTCGTTTAGCAATAAAGATTAATA
____________________________________________________________
consensus ATTCTAAATTTTTTTCATTTGAAATTATAATATATTTTTATTTAGCAATAAAGATTAATA
. : . : . : . : . : . :
rJMSF035J24+ AATAAGTGGCAATGCATTNAAACAGGATCAACNCATGNTNNTGAGNTACAGGAAGTACGA
rJMSF034J24+ AATAAGTGGCAATGCATTAAAACAGGATCAACTCATGTTTTTGAGCTACAGGAAGTACGA
rJMSF036K10+ AATAAATGGCAATGCATTAAAACATGATCAAATCATCTTCNTGAGCTGCAGGAAGTACGA
____________________________________________________________
consensus AATAAGTGGCAATGCATTAAAACAGGATCAACTCATGTTTTTGAGCTACAGGAAGTACGA
. : . : . : . : . : . :
rJMSF035J24+ AG---GCCACTGGAGCACCTCCG----ATCCATGTAATTCTAAATAAATTTCAATCACTG
rJMSF034J24+ AG---GCCATTGGAGTACCTCCG----ATCCATGTAATTCTAAATAAATTTCAATCA-TG
rJMSF036K10+ AGGCAGCCATTGGAGTACCTCCGGTCCATCCATGTCATTCTAAATAAAGTTGAATCA-TG
____________________________________________________________
consensus AG---GCCATTGGAGTACCTCCG----ATCCATGTAATTCTAAATAAATTTCAATCA-TG
. : . : . : . : . : . :
rJMSF035J24+ TGTACTTTGTGTGTTNCTATTCTTATTTCAAGTCATGTAATTCTATT
rJMSF034J24+ TGTA-TTTGTGTGTTTCTATTCTTATTTCAAGTCATGTAATTCTATT
rJMSF036K10+ TGTA-TTTGTGTGTTTGTATTCATATTTCAAGTCATGTAATTCTATTTTGTTCNGTATTG
____________________________________________________________
consensus TGTA-TTTGTGTGTTTCTATTCTTATTTCAAGTCATGTAATTCTATTTTGTTCNGTATTG