Contig 011372:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF021I10Sequence646006501 (2)ref|XP_009592676.1|1e-73PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 2-like isoform X1 708011372 (3)ref|XP_011070236.1|8e-78PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 2 isoform X3 [Sesa
JMSF027L16Sequence641006501 (2)ref|XP_009592676.1|1e-73PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 2-like isoform X1 755011372 (3)ref|XP_011070236.1|2e-87PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 2 isoform X3 [Sesa
JMSF036C01Sequence219011372 (3)

Alignment

This contig is upended


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rJMSF021I10+                                                   GGAGATCTGAATTACAGAA
rJMSF027L16+             CCCTAACGATCCCATCTCACGATCAGATATTCTGGTTTGGAGATCTGAATTACAGAA
                      ____________________________________________________________
consensus                CCCTAACGATCCCATCTCACGATCAGATATTCTGGTTTGGAGATCTGAATTACAGAA
 
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rJMSF021I10+          TCAGCCTGGCAGATAGTGAAGTGAGAAAGCTCGTTTCACGAAAGCAGTGGGACGAGCTCC
rJMSF027L16+          TCAGCCTGGCAGATAGTGAAGTGAGAAAGCTCGTTTCACGAAAGCAGTGGGACGAGCTCC
                      ____________________________________________________________
consensus             TCAGCCTGGCAGATAGTGAAGTGAGAAAGCTCGTTTCACGAAAGCAGTGGGACGAGCTCC
 
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rJMSF021I10+          TCGATCATGATCAGCTGAGCAAGGAGCTAAGAACTGGGCATGTTTTCGATGGCTGGAAAG
rJMSF027L16+          TCGATCATGATCAGCTGAGCAAGGAGCTAAGAACTGGGCATGTTTTCGATGGCTGGAAAG
                      ____________________________________________________________
consensus             TCGATCATGATCAGCTGAGCAAGGAGCTAAGAACTGGGCATGTTTTCGATGGCTGGAAAG
 
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rJMSF021I10+          AAGGAGCCATCAACTTTGCACCAACTTACAAATACGAGTTCAACTCAGACAGATACATCG
rJMSF027L16+          AAGGAGCCATCAACTTTGCACCAACTTACAAATACGAGTTCAACTCAGACAGATACATCG
                      ____________________________________________________________
consensus             AAGGAGCCATCAACTTTGCACCAACTTACAAATACGAGTTCAACTCAGACAGATACATCG
 
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rJMSF021I10+          GGGAAACCCCGCGAGAAGGGGAGAAGAGGAGATCCCCAGCATGGTGTGATCGAATACTAT
rJMSF027L16+          GGGAAACCCCGCGAGAAGGGGAGAAGAGGAGATCCCCAGCATGGTGTGATCGAATACTAT
                      ____________________________________________________________
consensus             GGGAAACCCCGCGAGAAGGGGAGAAGAGGAGATCCCCAGCATGGTGTGATCGAATACTAT
 
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rJMSF021I10+          GGTTGGGGAAAGGCATAAAACAGCTGTTTTACAAAAGGGCAGACATAAGATTATCAGACC
rJMSF027L16+          GGTTGGGGAAAGGCATAAAACAGCTGTTTTACAAAAGGGCAGACATAAGATTATCAGACC
                      ____________________________________________________________
consensus             GGTTGGGGAAAGGCATAAAACAGCTGTTTTACAAAAGGGCAGACATAAGATTATCAGACC
 
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rJMSF021I10+          ATAGACCAGTGAGTTCTATGTTCACAGTCGAAGTAGAAATCTTTAACCAACGAAAGCTCC
rJMSF027L16+          ATAGACCAGTGAGTTCTATGTTCACAGTCGAAGTAGAAATCTTTAACCAACGAAAGCTCC
                      ____________________________________________________________
consensus             ATAGACCAGTGAGTTCTATGTTCACAGTCGAAGTAGAAATCTTTAACCAACGAAAGCTCC
 
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rJMSF021I10+          AACGAGCCCTCAACGTCAAAGCTGCAGCTATACATCCTGATATTTTGCTTCTTGATGAGA
rJMSF027L16+          AACGAGCCCTCAACGTCAAAGCTGCAGCTATACATCCTGATATTTTGCTTCTTGATGAGA
                      ____________________________________________________________
consensus             AACGAGCCCTCAACGTCAAAGCTGCAGCTATACATCCTGATATTTTGCTTCTTGATGAGA
 
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rJMSF021I10+          TTTAAAATATATATATATATATATAGATGATTACCAGGTTTGCTGAGTTATCTTTTTGCA
rJMSF027L16+          TTTAAAATATATATATATATATATAGATGATTACCAGGTTTGCTGAGTTATCTTTTTGCA
                      ____________________________________________________________
consensus             TTTAAAATATATATATATATATATAGATGATTACCAGGTTTGCTGAGTTATCTTTTTGCA
 
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rJMSF021I10+          GATCTGAACTAGATTGGATTAAGGTTGTTTGAATTGACTGGGATAATATAATGCTCCAAC
rJMSF027L16+          GATCTGAACTAGATTGGATTAAGGTTGTTTGAATTGACTGGGATAATATAATGCTCCAAC
rJMSF036C01+                                        GAATTGACTGGGATAATATANTGCTCCAAC
                      ____________________________________________________________
consensus             GATCTGAACTAGATTGGATTAAGGTTGTTTGAATTGACTGGGATAATATAATGCTCCAAC
 
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rJMSF021I10+          TTTTGGTTTAAATCAAACCTAGTCCAATAGTTTGCAATATTTTTTTATTTTTGAATCTAT
rJMSF027L16+          TTTTGGTTTAAATCAAACCTAGTCCAATAGTTTGCAATATTTTTTTATTTTTGAATCTAT
rJMSF036C01+          TNTTGGNNTNAATCAAACCTAGTCCAATAGTTTGCAATANTTTNTTATTTTTGAATCNAT
                      ____________________________________________________________
consensus             TTTTGGTTTAAATCAAACCTAGTCCAATAGTTTGCAATATTTTTTTATTTTTGAATCTAT
 
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rJMSF021I10+          ATATAAAACT-TTGTGAGGCAAAAGAGGGACCATAAATTCA-TTAAATTTTGTCATGCTC
rJMSF027L16+          ATATAAAACT-TTGTGAGGCAAAAGAGGGACCATAAATTCA-TTAAATTTTGTCATGCTC
rJMSF036C01+          ATATAAAACTCTCGTGAGGCAAAAGAGGGACCATAAATTCACTTAAATTTTGTCACGCTC
                      ____________________________________________________________
consensus             ATATAAAACT-TTGTGAGGCAAAAGAGGGACCATAAATTCA-TTAAATTTTGTCATGCTC
 
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rJMSF021I10+          CTCCTTTTGGAGTGTATCAGAGAGAAGATGG                             
rJMSF027L16+          CTCCTTTTGGAGTGTATCAGAGAAAAGATGGGANAAAA                      
rJMSF036C01+          CTCCNTTTGGAGTGTATCCGAGAAAAGATGGGATAAAAAGATGTCTGTANCAACTGTAAA
                      ____________________________________________________________
consensus             CTCCTTTTGGAGTGTATCAGAGAAAAGATGGGATAAAAAGATGTCTGTANCAACTGTAAA