| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN044N24 | Sequence | 619 | 011370 (3) | gb|ADN33867.1| | 2e-85 | serine palmitoyltransferase [Cucumis melo subsp. melo] | |||||
| JMSF035O22 | Sequence | 657 | 003780 (2) | ref|XP_009611514.1| | 1e-91 | PREDICTED: long chain base biosynthesis protein 2a [Nicotiana tomentosiformis] | 701 | 011370 (3) | ref|XP_009761445.1| | 2e-100 | PREDICTED: long chain base biosynthesis protein 2a [Nicotiana sylvestris] |
| JMSF051K24 | Sequence | 309 | 003780 (2) | ref|XP_004516386.1| | 5e-26 | PREDICTED: long chain base biosynthesis protein 2a-like [Cicer arietinum] | 762 | 011370 (3) | ref|XP_009761445.1| | 9e-116 | PREDICTED: long chain base biosynthesis protein 2a [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF051K24+ GAGTTGACACTGCAGATGTGGATATCATGATGGGAACTTTCAC
____________________________________________________________
consensus GAGTTGACACTGCAGATGTGGATATCATGATGGGAACTTTCAC
. : . : . : . : . : . :
rJMSF051K24+ AAAATCGNTTGGATCATGTGGCGGTTATATTGCAGGATCCAAGGAATTGATTCAATATCT
rJMSF035O22+ GGCGGTTATATTGCAGGATCCAAGGAATTGATTCAATATCT
____________________________________________________________
consensus AAAATCGNTTGGATCATGTGGCGGTTATATTGCAGGATCCAAGGAATTGATTCAATATCT
. : . : . : . : . : . :
rJMSF051K24+ GAAGTACACATGCCCTGCTCATCTATATGCAACATCAATATCACCTCCTGCTGCCCAACA
JMFN044N24- AAGTACACATGCCCTGCTCATCTCTATGGAACATCAATATCGCCTCCTGCTGCCCAACA
rJMSF035O22+ GAAGTACACATGCCCTGCTCATCTATATGCAACATCAATATCACCTCCTGCTGCCCAACA
____________________________________________________________
consensus GAAGTACACATGCCCTGCTCATCTATATGCAACATCAATATCACCTCCTGCTGCCCAACA
. : . : . : . : . : . :
rJMSF051K24+ AATTATTTCTGCCATAAAAGTTATTCTTGGAGAAGATGGCTCTAGTAGGGGGGCTGAAAA
JMFN044N24- AATAATTTCTGCCATGAAAGTTATCAGTGGAGAAGATGGGTCTACCAGAGGAGCTGAAAA
rJMSF035O22+ AATTATTTCTGCCATAAAAGTTATTCTTGGAGAAGATGGCTCTAGTAGGGGGGCTGAAAA
____________________________________________________________
consensus AATTATTTCTGCCATAAAAGTTATTCTTGGAGAAGATGGCTCTAGTAGGGGGGCTGAAAA
. : . : . : . : . : . :
rJMSF051K24+ ACTAGCACGAATACGTGAGAACAGCAACTTTTTCCGCTCAGAACTGCAGAAAATGGGCTT
JMFN044N24- GCTAGCACGTATACGTGACAACAGCAACTTTTTCCGCTTAGAACTGCAGAAGATGGGGTT
rJMSF035O22+ ACTAGCACGAATACGTGAGAACAGCAACTTTTTCCGCTCAGAACTGCAGAAAATGGGCTT
____________________________________________________________
consensus ACTAGCACGAATACGTGAGAACAGCAACTTTTTCCGCTCAGAACTGCAGAAAATGGGCTT
. : . : . : . : . : . :
rJMSF051K24+ CGAGGTCCTGGGAGATAACGACTCCCCTGTGATGCCCATCATGCTCTATAATCCTTCCAA
JMFN044N24- CGACGTCCTAGGAGACCAGGACTCCCCTGTCATACCCATCATGCTCTACAATCCGGGCAA
rJMSF035O22+ CGAGGTCCTGGGAGATAACGACTCCCCTGTGATGCCCATCATGCTCTATAATCCTTCCAA
____________________________________________________________
consensus CGAGGTCCTGGGAGATAACGACTCCCCTGTGATGCCCATCATGCTCTATAATCCTTCCAA
. : . : . : . : . : . :
rJMSF051K24+ AATACCCGCGTTTTCACGAGAGTGTCTCAGACAGAATGTGGCTGTGGTAACGGTTGCTTT
JMFN044N24- AATACCTGCGGTCTCACGAGAGTGTCTCAAACAGAATATAGCTGTGGTGATGGTTGCTTT
rJMSF035O22+ AATACCCGCGTTTTCACGAGAGTGTCTCAGACAGAATGTGGCTGTGGTAACGGTTGCTTT
____________________________________________________________
consensus AATACCCGCGTTTTCACGAGAGTGTCTCAGACAGAATGTGGCTGTGGTAACGGTTGCTTT
. : . : . : . : . : . :
rJMSF051K24+ TCCAGCAACTCCTCTACTATTAGCCAGAGCTCGCATATGCATTTCAGCTGCTCACACAAG
JMFN044N24- TCCTGGTGTTCCACTGCTGTTGGCCAGAGTTCGCATATGCATTTCAGCTGCTCACACAAG
rJMSF035O22+ TCCAGCAACTCCTCTACTATTAGCCAGAGCTCGCATATGCATTTCAGCTGCTCACACAAG
____________________________________________________________
consensus TCCAGCAACTCCTCTACTATTAGCCAGAGCTCGCATATGCATTTCAGCTGCTCACACAAG
. : . : . : . : . : . :
rJMSF051K24+ GGAAGATCTTATCAAAGCATTAGAGGTTATCAGTAGAGTTGGCGATCTGGTGGGCATAAA
JMFN044N24- GGAAGATCTTCTCAAAGCATTAGAGGTTATCAGCAGAATTGGTGATCTGGTAGGCATCAA
rJMSF035O22+ GGAAGATCTTATCAAAGCATTAGAGGTTATCAGTAGAGTTGGCGATCTGGTGGGCATAAA
____________________________________________________________
consensus GGAAGATCTTATCAAAGCATTAGAGGTTATCAGTAGAGTTGGCGATCTGGTGGGCATAAA
. : . : . : . : . : . :
rJMSF051K24+ ATACTTCCCTGCCGAGCCCAAGAAACAACAGCTAGAAGAAAACAGACTAAAGCTGGAGTG
JMFN044N24- ATACTACCCTGC
rJMSF035O22+ ATACTTCCCTGCCGAGCCCAAGAAACAACAGCTAGAAGAAAACAGACTAAAGCTGGAGTG
____________________________________________________________
consensus ATACTTCCCTGCCGAGCCCAAGAAACAACAGCTAGAAGAAAACAGACTAAAGCTGGAGTG
. : . : . : . : . : . :
rJMSF051K24+ AACACACACACACATGCACACACCAGTCTTTGTGTAGTGAGACTTATCGGTTGAGCAGAA
rJMSF035O22+ AACACACACACACATGCACACACCAGTCTTTGTGTAGTGAGACTTATCGGTTGAGCAGAA
____________________________________________________________
consensus AACACACACACACATGCACACACCAGTCTTTGTGTAGTGAGACTTATCGGTTGAGCAGAA
. : . : . : . : . : . :
rJMSF051K24+ TGATGTTAGAGTTGTGGTGTTGGTGTTGCTGTGTTAATGTCACTGCCTTACACGGAGCCA
rJMSF035O22+ TGATGTTAGAGTTGTGGTGTTGGTGTTGCTGTGTTAATGTCACTGCCTTACACGGAGCCA
____________________________________________________________
consensus TGATGTTAGAGTTGTGGTGTTGGTGTTGCTGTGTTAATGTCACTGCCTTACACGGAGCCA
. : . : . : . : . : . :
rJMSF051K24+ TATTTATTGTTAGGTAATTGTGATGTTAAGATTTGTCAAATTTTGTGTACCAGGAAAGT
rJMSF035O22+ TATTTATTGTTAGGTAATTGTGATGTTAAGATTTGTCAAATTTTGTGTACCAGGAAAGTG
____________________________________________________________
consensus TATTTATTGTTAGGTAATTGTGATGTTAAGATTTGTCAAATTTTGTGTACCAGGAAAGTG