Contig 011369:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF012F21Sequence250011369 (2)emb|CDP01141.1|4e-08unnamed protein product [Coffea canephora]648001306 (3)
JMSF035N16Sequence606001306 (3)649011369 (2)

Alignment

This contig is upended


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JMSF012F21+                                                                     GA
                      ____________________________________________________________
consensus                                                                       GA
 
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JMSF012F21+           CCGAGACTTTTTTTAGATCAGAGACTTCAACACGGCGGTGNCAGTCGATGGCAGCTGTGA
                      ____________________________________________________________
consensus             CCGAGACTTTTTTTAGATCAGAGACTTCAACACGGCGGTGNCAGTCGATGGCAGCTGTGA
 
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JMSF012F21+           CGGTTGCAGCTGTGAACAAACATGTCTTCCGGCAGTAGCTTCCAATACGATGCCTTCATT
                      ____________________________________________________________
consensus             CGGTTGCAGCTGTGAACAAACATGTCTTCCGGCAGTAGCTTCCAATACGATGCCTTCATT
 
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JMSF012F21+           TTCCGGCGCATCCCCTTAGTCTGCACCAATGACTGGAACGCCTTCATCCGCGGCCTCACC
rJMSF035N16+                     CCCCTTAGTCTGCACCAATGACTGGAACGCCTTCATCCGCGGCCTCACC
                      ____________________________________________________________
consensus             TTCCGGCGCATCCCCTTAGTCTGCACCAATGACTGGAACGCCTTCATCCGCGGCCTCACC
 
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JMSF012F21+           CAGAGCGACCAGCCAATTGAAGTCGTTGCGTGATACGTCCGAATGTTACTGACGCCTTCA
rJMSF035N16+          CAGAGCGACCAGCCAATTGAAGTCGTTGCGTGATACGTCCGAATGTTACTGACGCCTTCA
                      ____________________________________________________________
consensus             CAGAGCGACCAGCCAATTGAAGTCGTTGCGTGATACGTCCGAATGTTACTGACGCCTTCA
 
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JMSF012F21+           CGCTCGC                                                     
rJMSF035N16+          CGCTCGCAAGGTGTTTGTAGAAATGGAGATGAGAGATGTAGCTAGCTGACTCTCCTCGGT
                      ____________________________________________________________
consensus             CGCTCGCAAGGTGTTTGTAGAAATGGAGATGAGAGATGTAGCTAGCTGACTCTCCTCGGT
 
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rJMSF035N16+          CAACAGATAAAGACAGTTGACTATCAGAAGAAGAAGACATAAAAAGACAGAAATACCCTT
                      ____________________________________________________________
consensus             CAACAGATAAAGACAGTTGACTATCAGAAGAAGAAGACATAAAAAGACAGAAATACCCTT
 
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rJMSF035N16+          CATTTTCACGGTCAACAAACGGCACAAGTGACGGAGGACCAAAAGTGTCTATCGACCAAT
                      ____________________________________________________________
consensus             CATTTTCACGGTCAACAAACGGCACAAGTGACGGAGGACCAAAAGTGTCTATCGACCAAT
 
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rJMSF035N16+          AAACGTGGCCACAAATTGGCAAATTTTATTATGGAGGATGAAAACTGTCCACGCTCCAAT
                      ____________________________________________________________
consensus             AAACGTGGCCACAAATTGGCAAATTTTATTATGGAGGATGAAAACTGTCCACGCTCCAAT
 
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rJMSF035N16+          AAGTCTAGGACCAAAAGGTTGAATCCCCAACCCTAAGGGCCCTTCACACTCCGCCCAAAC
                      ____________________________________________________________
consensus             AAGTCTAGGACCAAAAGGTTGAATCCCCAACCCTAAGGGCCCTTCACACTCCGCCCAAAC
 
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rJMSF035N16+          CATAAAGGCTAGACCTTTGTTTACTGCCCACAAAGAGCCCACTCACTTTGAGTGGTTACT
                      ____________________________________________________________
consensus             CATAAAGGCTAGACCTTTGTTTACTGCCCACAAAGAGCCCACTCACTTTGAGTGGTTACT
 
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rJMSF035N16+          CCTACACTGCCGCTGGTGAGATACCTGGTCATTCTTCCCAAACTTCACCCGTATGACCAG
                      ____________________________________________________________
consensus             CCTACACTGCCGCTGGTGAGATACCTGGTCATTCTTCCCAAACTTCACCCGTATGACCAG
 
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rJMSF035N16+          TTGAGCTGCCCATGCGGGCAAATAGACACATATTCTTATGATTATAGAAAATTGTAGTTG
                      ____________________________________________________________
consensus             TTGAGCTGCCCATGCGGGCAAATAGACACATATTCTTATGATTATAGAAAATTGTAGTTG
 
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rJMSF035N16+          TTGATTATTGGCAATACCCTCACGGTTGAGCATATATAAGAATACAACAGAACAAATACC
                      ____________________________________________________________
consensus             TTGATTATTGGCAATACCCTCACGGTTGAGCATATATAAGAATACAACAGAACAAATACC