Contig 011367:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005B20Sequence309003534 (2)gb|KCW72593.1|4e-37hypothetical protein EUGRSUZ_E01063, partial [Eucalyptus grandis]298011367 (2)gb|KEH37013.1|6e-20regulatory protein NPR1 [Medicago truncatula]
JMSF035A14Sequence703000411 (4)ref|XP_009776515.1|7e-18PREDICTED: regulatory protein NPR3-like isoform X2 [Nicotiana sylvestris]764011367 (2)emb|CBI29072.3|8e-111unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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rJMSF035A14+                          GGATGGACCAAGTGCAGTGAGAATCTGCAGGCGGTTAACTAGGC
                      ____________________________________________________________
consensus                             GGATGGACCAAGTGCAGTGAGAATCTGCAGGCGGTTAACTAGGC
 
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rJMSF035A14+          CGAAAGATTATCATGCAAAANCAGAACAAGGCCAGGAAGCGAACAAAGACAGGATATGTA
                      ____________________________________________________________
consensus             CGAAAGATTATCATGCAAAANCAGAACAAGGCCAGGAAGCGAACAAAGACAGGATATGTA
 
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rJMSF035A14+          TTGATGTCTTAGAGAGGGAGATGCTCAGGAAACCAATGGCTGCTGATGGGTTATCCTCTT
                      ____________________________________________________________
consensus             TTGATGTCTTAGAGAGGGAGATGCTCAGGAAACCAATGGCTGCTGATGGGTTATCCTCTT
 
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rJMSF035A14+          CGCCGATGATGGCTGATGATCTGCACATGAAACTCCTTTACCTGGAAAATAGAGTGGCAT
                      ____________________________________________________________
consensus             CGCCGATGATGGCTGATGATCTGCACATGAAACTCCTTTACCTGGAAAATAGAGTGGCAT
 
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rJMSF005B20+                                      TAAACTAGCCATGGAAATTGCAAATGCTGAGA
rJMSF035A14+          TTGCACGACTACTATTCCCCCTTGAAGCTAAACTAGCCATGGAAATTGCAAATGCTGAGA
                      ____________________________________________________________
consensus             TTGCACGACTACTATTCCCCCTTGAAGCTAAACTAGCCATGGAAATTGCAAATGCTGAGA
 
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rJMSF005B20+          TGACAGCTGAGTTTGCTGGTTTCTTGGCATCTAAAGGTTCAAATGGGAATTTGAGGGAGG
rJMSF035A14+          TGACAGCTGAGTTTGCTGGTTTCTTGGCATCTAAAGGTTCAAATGGGAATTTGAGGGAGG
                      ____________________________________________________________
consensus             TGACAGCTGAGTTTGCTGGTTTCTTGGCATCTAAAGGTTCAAATGGGAATTTGAGGGAGG
 
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rJMSF005B20+          TGGATTTGAACGAGACACCAATAATGCAGAATAATAGACTTCTGTCAAGGTTAGAAGCCC
rJMSF035A14+          TGGATTTGAACGAGACACCAATAATGCAGAATAATAGACTTCTGTCAAGGTTAGAAGCCC
                      ____________________________________________________________
consensus             TGGATTTGAACGAGACACCAATAATGCAGAATAATAGACTTCTGTCAAGGTTAGAAGCCC
 
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rJMSF005B20+          TCTCAAAGACAG                                                
rJMSF035A14+          TCTCAAAGACAGTGGAGCTGGGCCGACGTTATTTTCCCAATTGCTCTCTAGTTCTGGATA
                      ____________________________________________________________
consensus             TCTCAAAGACAGTGGAGCTGGGCCGACGTTATTTTCCCAATTGCTCTCTAGTTCTGGATA
 
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rJMSF035A14+          AGTTCATGGAGGATGACTTGCCTGATCTATTCTACCTAGAGAAGGGCACTTCAGAGGAGC
                      ____________________________________________________________
consensus             AGTTCATGGAGGATGACTTGCCTGATCTATTCTACCTAGAGAAGGGCACTTCAGAGGAGC
 
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rJMSF035A14+          AAAAAATTAAGAGGAAGCGATTTAAAGAGCTCAAAGATGATGTCCAAAGGGCATTCAACA
                      ____________________________________________________________
consensus             AAAAAATTAAGAGGAAGCGATTTAAAGAGCTCAAAGATGATGTCCAAAGGGCATTCAACA
 
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rJMSF035A14+          AGGACAAGGCTGAAAATCGTTGCTCTGGTTTGTCTTCATCATCGTCTTGCAATTCTCTGA
                      ____________________________________________________________
consensus             AGGACAAGGCTGAAAATCGTTGCTCTGGTTTGTCTTCATCATCGTCTTGCAATTCTCTGA
 
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rJMSF035A14+          AAGACCATATGAGTTATAAATTTAGGAAAATGTGAAAGTATATAGTGGATCCACTCTCAC
                      ____________________________________________________________
consensus             AAGACCATATGAGTTATAAATTTAGGAAAATGTGAAAGTATATAGTGGATCCACTCTCAC
 
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rJMSF035A14+          AAGTACACAGTTTTGAATGGAGAATATGTTGTCCTCAAAACTCTCATGTAAAAGGAAAAT
                      ____________________________________________________________
consensus             AAGTACACAGTTTTGAATGGAGAATATGTTGTCCTCAAAACTCTCATGTAAAAGGAAAAT