Contig 011366:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035A05Sequence658011366 (2)ref|XP_009589188.1|2e-67PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast [Nicotiana
JMSF036M19Sequence680023250ref|XP_009589188.1|1e-114PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast [Nicotiana 556011366 (2)ref|XP_009589188.1|9e-42PREDICTED: probable hydroxyacylglutathione hydrolase 2, chloroplast [Nicotiana

Alignment

This contig is upended


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rJMSF036M19+                                         GGCAAGCNGTTTGAAGGAACTCCTGATCA
rJMSF035A05+           ACGGGAGACACTTTGTTTAGCTTATCATGTGGCAAGCTGTTTGAAGGAACTCCTGATCA
                      ____________________________________________________________
consensus              ACGGGAGACACTTTGTTTAGCTTATCATGTGGCAAGCTGTTTGAAGGAACTCCTGATCA
 
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rJMSF036M19+          GANGCNTGCTTNCCTGAGGAAGGATTATGTTGTTACCCAATGATACAAATATNTATTGTG
rJMSF035A05+          GATGCTTGCTTCCCTGAGGAA-GATTATGTTGTTACCCAATGATACAAATATCTATTGTG
                      ____________________________________________________________
consensus             GATGCTTGCTTCCCTGAGGAAGGATTATGTTGTTACCCAATGATACAAATATCTATTGTG
 
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rJMSF036M19+          GCCATGNGTATNCTTTGAGTAATTCGAAGTTCGCACTTTCAATAGAACNTGGAAATCAAG
rJMSF035A05+          GCCATGAGTATACTTTGAGTAATTCGAAGTTCGCACTTTCAATAGAACCTGGAAATCAAG
                      ____________________________________________________________
consensus             GCCATGAGTATACTTTGAGTAATTCGAAGTTCGCACTTTCAATAGAACCTGGAAATCAAG
 
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rJMSF036M19+          AGTTGCAATCTTATGCTGCCCAGATCNCCAATCTTNGCAAGAAGGGCTTACCCACAATNC
rJMSF035A05+          AGTTGCAATCTTATGCTGCCCAGATCACCAATCTTCGCAAGAAGGGCTTACCCACAATAC
                      ____________________________________________________________
consensus             AGTTGCAATCTTATGCTGCCCAGATCACCAATCTTCGCAAGAAGGGCTTACCCACAATAC
 
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rJMSF036M19+          CAACAACCCTTGAGAAGGAGAAGNTATGCAATCCATTCCTACGGACTTTCAGTATGGAGA
rJMSF035A05+          CAACAACCCTTGAGAAGGAGAAGCTATGCAATCCATTCGTACGGACTTTCAGTATGGAGA
                      ____________________________________________________________
consensus             CAACAACCCTTGAGAAGGAGAAGCTATGCAATCCATTCGTACGGACTTTCAGTATGGAGA
 
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rJMSF036M19+          TCAGGAAATCGTTAAACATTCCAGACTNTGNGGATGATGNTGAAGCTTTGAAGGCTNTCC
rJMSF035A05+          TCAGGAAATCGTTAAACATTCCAGACTCTGCGGATGATGCTGAAGCTNTGAAGGCTATCC
                      ____________________________________________________________
consensus             TCAGGAAATCGTTAAACATTCCAGACTCTGCGGATGATGCTGAAGCTTTGAAGGCTATCC
 
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rJMSF036M19+          GNCAAGCTAAGGATAACTTTTAGTATATGCTTNGGATTNTTCAGCAACTGTCAAAGTCTC
rJMSF035A05+          GCCAAGCTAAGGATAACTTTTNGTATATGCTTTGGATTCTTCAGCAACTGTCAAAGTNTC
                      ____________________________________________________________
consensus             GCCAAGCTAAGGATAACTTTTAGTATATGCTTTGGATTCTTCAGCAACTGTCAAAGTCTC
 
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rJMSF036M19+          AAAGCTAGCTCAACTGCCACAGAAATATGAGCACGTTTGGCGTTTCGTGTCCCTTGCAAA
rJMSF035A05+          AAAGCTAGCTCAACTGCCACAGNAATATGAGCACGTTTGGCGTTTCGTGTCCCTTGCAAA
                      ____________________________________________________________
consensus             AAAGCTAGCTCAACTGCCACAGAAATATGAGCACGTTTGGCGTTTCGTGTCCCTTGCAAA
 
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rJMSF036M19+          GCAAANGACTGTTGGATGTAANGTAGCTTTATGTGTATAGCAAATTTCTTCCAATTTCTC
rJMSF035A05+          GCAAAAGACTGTTGGATGTAATGTAGCTTTATGTGTATAGCAAATTTCTTCCAATTTCTC
                      ____________________________________________________________
consensus             GCAAAAGACTGTTGGATGTAATGTAGCTTTATGTGTATAGCAAATTTCTTCCAATTTCTC
 
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rJMSF036M19+          CTGCAATAAAAGAAANCATANTTAGTGTNTGTCTACAAATCTACAAT             
rJMSF035A05+          CTGCAATAAAAGAAAACATATTTAGTGTTTGTCTNCAAATCTACAATAGATCATCTGGTT
                      ____________________________________________________________
consensus             CTGCAATAAAAGAAAACATATTTAGTGTTTGTCTACAAATCTACAATAGATCATCTGGTT
 
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rJMSF035A05+          AAATTTCTCATGTATGTTCTTNAACTGAACAGATAGTAGAGTTTAGTNGAAAGATACTGA
                      ____________________________________________________________
consensus             AAATTTCTCATGTATGTTCTTNAACTGAACAGATAGTAGAGTTTAGTNGAAAGATACTGA