Contig 011362:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF034I02Sequence687011362 (2)ref|XP_009619630.1|8e-22PREDICTED: B3 domain-containing protein Os01g0723500-like isoform X2 [Nicotiana657011362 (2)ref|XP_006356280.1|8e-27PREDICTED: B3 domain-containing protein REM9-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF034I02-              GGAGTCCCTTTTAAACTACTATGTTGAAGAACATGTTTTAAAACCTCATAGCCACGG
                      ____________________________________________________________
consensus                GGAGTCCCTTTTAAACTACTATGTTGAAGAACATGTTTTAAAACCTCATAGCCACGG
 
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JMSF034I02-           AGCTTTGAGAGATTACTTCAACGGTGTCCAATTTCCGCAGCCTTTATAGATTACTTGATC
                      ____________________________________________________________
consensus             AGCTTTGAGAGATTACTTCAACGGTGTCCAATTTCCGCAGCCTTTATAGATTACTTGATC
 
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JMSF034I02-           GTGTTTTCCGGCTATCCTCAATTGGAACGTCCCAGTTGAAGAAACCCCATCTGCAAGTCT
                      ____________________________________________________________
consensus             GTGTTTTCCGGCTATCCTCAATTGGAACGTCCCAGTTGAAGAAACCCCATCTGCAAGTCT
 
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JMSF034I02-           TGAAATGGGTGATGATCCTAAGCAAGATCTAGGTCAAGAAGTTAATGAGCAAACCCCTTC
                      ____________________________________________________________
consensus             TGAAATGGGTGATGATCCTAAGCAAGATCTAGGTCAAGAAGTTAATGAGCAAACCCCTTC
 
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JMSF034I02-           TGACGGTGCTGGAACCTCAAGAAAGCGACCTGTTACTTCCAAGTTTCTCTCTTCCAATCT
                      ____________________________________________________________
consensus             TGACGGTGCTGGAACCTCAAGAAAGCGACCTGTTACTTCCAAGTTTCTCTCTTCCAATCT
 
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JMSF034I02-           TCCAATTGGTTGGCGCTTCTTCAAGGTTATGAGGCCAGGGTTCCATACCAGACTCAACCT
                      ____________________________________________________________
consensus             TCCAATTGGTTGGCGCTTCTTCAAGGTTATGAGGCCAGGGTTCCATACCAGACTCAACCT
 
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JMSF034I02-           GCCGCCCATTTTGTGTAAGAAGCTTGGTGAAAAAAAGCCGGAAGAAGTGGTGTTAACAGG
                      ____________________________________________________________
consensus             GCCGCCCATTTTGTGTAAGAAGCTTGGTGAAAAAAAGCCGGAAGAAGTGGTGTTAACAGG
 
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JMSF034I02-           CCAAAATGGGAGCTTCAAAGTTAAAATCCAAGAAGGCAAAGATCAAAGGCTCTGTTTCAC
                      ____________________________________________________________
consensus             CCAAAATGGGAGCTTCAAAGTTAAAATCCAAGAAGGCAAAGATCAAAGGCTCTGTTTCAC
 
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JMSF034I02-           AGAGGGGTGGGATGATTTTGTGGGTCAAAATGGCATATCTCTTGGAGA-TTTCGCCGTGT
rJMSF034I02+             GGGGTGGGATGATTTTGTGGGTCAAAATGGCATATCTCTTGGAGANTTTCGCCGTGT
                      ____________________________________________________________
consensus             AGAGGGGTGGGATGATTTTGTGGGTCAAAATGGCATATCTCTTGGAGANTTTCGCCGTGT
 
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JMSF034I02-           TTGAACACATGGACAGTTTTCATTTCAGTGTCGTTCTGTTTGACCAAACTTGTTGCCAGA
rJMSF034I02+          TTGAACACATGGACAGTTTTCATTTCAGTGTCGTTCTGTTTGACCAAACTTGTTGCCAGA
                      ____________________________________________________________
consensus             TTGAACACATGGACAGTTTTCATTTCAGTGTCGTTCTGTTTGACCAAACTTGTTGCCAGA
 
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JMSF034I02-           AAAATGTCCATGTCAACCCAGAAACCAGCAGCAATGACAGTGAAGGAGGAAAGAGTTTGT
rJMSF034I02+          AAAATGTCCATGTCAACCCAGAAACCAGCAGCAATGACAGTGAAGGAGGAAAGAGTTTGT
                      ____________________________________________________________
consensus             AAAATGTCCATGTCAACCCAGAAACCAGCAGCAATGACAGTGAAGGAGGAAAGAGTTTGT
 
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JMSF034I02-           GTACCGGGCAAGAAAATTCTAGTTGCTTTAC                             
rJMSF034I02+          GTACCGGGCAAGAAAATTCTAGTTGCTTTACAACCACCATAAAAGCATACAATGTACGCA
                      ____________________________________________________________
consensus             GTACCGGGCAAGAAAATTCTAGTTGCTTTACAACCACCATAAAAGCATACAATGTACGCA
 
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rJMSF034I02+          GTAGGGCTCCTTACATGCACATTCCACGGAAGTTTTGTACATCAAACAATCTTTTGATGA
                      ____________________________________________________________
consensus             GTAGGGCTCCTTACATGCACATTCCACGGAAGTTTTGTACATCAAACAATCTTTTGATGA
 
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rJMSF034I02+          GCACAAGCATCACTCTTAGAGGACCCTGTGGTAAACTCTGGCCAGCCAAACTTAGAACAT
                      ____________________________________________________________
consensus             GCACAAGCATCACTCTTAGAGGACCCTGTGGTAAACTCTGGCCAGCCAAACTTAGAACAT
 
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rJMSF034I02+          ATGTATATGGTAAGACATCGGGAGACTATGCATGCATTTATGATGGCTGGAAAGAATTTG
                      ____________________________________________________________
consensus             ATGTATATGGTAAGACATCGGGAGACTATGCATGCATTTATGATGGCTGGAAAGAATTTG
 
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rJMSF034I02+          CCACGCACTATGATCTTAAGGAAAGAGATGTCTGCAGCTTTCGCTTCGTTCCTCGCCCAA
                      ____________________________________________________________
consensus             CCACGCACTATGATCTTAAGGAAAGAGATGTCTGCAGCTTTCGCTTCGTTCCTCGCCCAA
 
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rJMSF034I02+          CTTCTTACTGTTTGATGGTGGATGTGAAGATCATTCCGGCCTGTTAATTAACTTCATTTT
                      ____________________________________________________________
consensus             CTTCTTACTGTTTGATGGTGGATGTGAAGATCATTCCGGCCTGTTAATTAACTTCATTTT
 
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rJMSF034I02+          AGCACTAATCTAAGATGACCTCTTTTTTTTGTCCTTTTTGAATCATCTTGGCAAATGCAG
                      ____________________________________________________________
consensus             AGCACTAATCTAAGATGACCTCTTTTTTTTGTCCTTTTTGAATCATCTTGGCAAATGCAG
 
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rJMSF034I02+          CATGTAGTTTTTGGATCATTTCGGCAAACATGGTAGGAAGCTGCCCAGCTTCCTTTCTAC
                      ____________________________________________________________
consensus             CATGTAGTTTTTGGATCATTTCGGCAAACATGGTAGGAAGCTGCCCAGCTTCCTTTCTAC