Contig 011361:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF024K21-                                                         CGAGAACCGAGAGG
JMSF034F07-                                TTGGGTCACCGAGAGCTGAAGTCGACGAGAACCGAGAGG
                      ____________________________________________________________
consensus                                  TTGGGTCACCGAGAGCTGAAGTCGACGAGAACCGAGAGG
 
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JMFF024K21-           CAAGAGCTGAAGTCTTTCCGCCAGTCACGCCACCGGCCAACGCTGCTCTCGGCTGGTCAC
JMSF034F07-           CAAGAGCTGAAGTCTTTCCGCCAGTCACGCCACCGGCCAACGCTGCTCTCGGCTGGTCAC
                      ____________________________________________________________
consensus             CAAGAGCTGAAGTCTTTCCGCCAGTCACGCCACCGGCCAACGCTGCTCTCGGCTGGTCAC
 
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JMFF024K21-           CCCACCGCCCACCGCTGCTCTCCGCCAGTCCGACGCTCCTACCAGCGCCACCCCCCACCC
JMSF034F07-           CCCACCGCCCACCGCTGCTCTCCGCCAGTCCGACGCTCCTACCAGCGCCACCCCCCACCC
                      ____________________________________________________________
consensus             CCCACCGCCCACCGCTGCTCTCCGCCAGTCCGACGCTCCTACCAGCGCCACCCCCCACCC
 
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JMFF024K21-           CCACGACTGACTGTCTCGCAACTGCCCAGTCGACGAATTCGTAGGTTTGGAATTTACTCT
JMSF034F07-           CCACGACTGACTGTCTCGCAACTGCCCAGTCGACGAATTCGTAGGTTTGGAATTTACTCT
                      ____________________________________________________________
consensus             CCACGACTGACTGTCTCGCAACTGCCCAGTCGACGAATTCGTAGGTTTGGAATTTACTCT
 
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JMFF024K21-           TTCAAGTTTTGGAATTCGAGTGGTAGCAATTCCAGCTTTTTCGGAAGTTCCATTACGCCG
JMSF034F07-           TTCAAGTTTTGGAATTCGAGTGGTAGCAATTCCAGCTTTTTCGGAAGTTCCATTACGCCG
                      ____________________________________________________________
consensus             TTCAAGTTTTGGAATTCGAGTGGTAGCAATTCCAGCTTTTTCGGAAGTTCCATTACGCCG
 
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JMFF024K21-           CCCACCAGAATCCGCCGGAAAAGTTCACCGCCGTCACCCACCCAGCGATGTGGACGAAAA
JMSF034F07-           CCCACCAGAATCCGCCGGAAAAGTTCACCGCCGTCACCCACCCAGCGATGTGGACGAAAA
                      ____________________________________________________________
consensus             CCCACCAGAATCCGCCGGAAAAGTTCACCGCCGTCACCCACCCAGCGATGTGGACGAAAA
 
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JMFF024K21-           AGCTTCGGACTTTTGTCCCATTTTCGAGAACCCTCTTTTATCGAGACCCACCCCTTTCTT
JMSF034F07-           AGCTTCGGACTTTTGTCCCATTTTCGAGAACCCTCTTTTATCGAGACCCACCTCTTTCTT
                      ____________________________________________________________
consensus             AGCTTCGGACTTTTGTCCCATTTTCGAGAACCCTCTTTTATCGAGACCCACCTCTTTCTT
 
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JMFF024K21-           CAACCTTACTTCCAATCCCTTTTCATTCCCTCGCACAAATTACAATCCCCTTTTCTTCTT
JMSF034F07-           CAACCTTACTTCCAATCCCTTTTCATTCCCTCGCACAAATTACAATCCCCTTTTCTTCTT
                      ____________________________________________________________
consensus             CAACCTTACTTCCAATCCCTTTTCATTCCCTCGCACAAATTACAATCCCCTTTTCTTCTT
 
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JMFF024K21-           CTTCTTTCCATATAGAAGAAGCTTCTCC                                
JMSF034F07-           CTTCTTTCCATATAGAAGAAGCTTCTCCTTCTAGTGTGTTCCAATCCCAAAGGCTTCATT
                      ____________________________________________________________
consensus             CTTCTTTCCATATAGAAGAAGCTTCTCCTTCTAGTGTGTTCCAATCCCAAAGGCTTCATT
 
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JMSF034F07-           TGATCGGAGAAAACATATGTTTCCAAAGTGGGAAATTGTTTTGCTCAGTATCTGCGGAGA
                      ____________________________________________________________
consensus             TGATCGGAGAAAACATATGTTTCCAAAGTGGGAAATTGTTTTGCTCAGTATCTGCGGAGA
 
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JMSF034F07-           AATTTAAGTGCTGGAACTGTAACTCTGTGGGAACAAGTAACCAGCCATTTCTCGTCTGTG
rJMFF024K21+             TTAAGTGCTGGAACTGTAACTCTGTGGGAACAAGTAACCAGCCATTTCTTGTCTGTG
rJMSF034F07+             TTAAGTGCTGGAACTGTNACTCTGTGGGAACAAGTAACCAGCCA-TTCTCGTCTGTG
                      ____________________________________________________________
consensus             AATTTAAGTGCTGGAACTGTAACTCTGTGGGAACAAGTAACCAGCCATTTCTCGTCTGTG
 
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JMSF034F07-           AAGCTTGTGGCAGCGTTCAACATGTAGATGAATCCATTGATTAT                
rJMFF024K21+          AAGCTTGTGGCAGCGTTCAACATGTAGATGAATCCATTGATTATTTCCAAATTTTTGGAT
rJMSF034F07+          AAGCTTGTGGCAGCGTTCAACATGTAGATGAATCCATTGATTATTTCCAAATTTTTGGAT
                      ____________________________________________________________
consensus             AAGCTTGTGGCAGCGTTCAACATGTAGATGAATCCATTGATTATTTCCAAATTTTTGGAT
 
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rJMFF024K21+          TGGAGAAAAAATATGATATCGAGGGGGAGAATCTCGAGCGTAAGTACAAAGACTGGCAGA
rJMSF034F07+          TGGAGAAAAAATATGATATCGAGGGGGAGAATCTCGAGCGTAAGTACAAAGACTGGCAGA
                      ____________________________________________________________
consensus             TGGAGAAAAAATATGATATCGAGGGGGAGAATCTCGAGCGTAAGTACAAAGACTGGCAGA
 
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rJMFF024K21+          GGAAGCTGCATCCTGACTTAGTTCATACAAAATCCGAGAAAGAAAAGGAGTTTGCTGCTG
rJMSF034F07+          GGAAGCTGCATCCTGACTTAGTTCATACAAAATCCGAGAAAGAAAAGGAGTTTGCTGCTG
                      ____________________________________________________________
consensus             GGAAGCTGCATCCTGACTTAGTTCATACAAAATCCGAGAAAGAAAAGGAGTTTGCTGCTG
 
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rJMFF024K21+          AACAGTCTGCTCGTGTAATTGATGCATATCGAACACTCACAGACTCGTTGTCAAGAGCAA
rJMSF034F07+          AACAGTCTGCTCGTGTAATTGATGCATATCGAACACTCACAGACTCGTTGTCAAGAGCAA
                      ____________________________________________________________
consensus             AACAGTCTGCTCGTGTAATTGATGCATATCGAACACTCACAGACTCGTTGTCAAGAGCAA
 
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rJMFF024K21+          TATATATTGCGAAGTTAGAAGGTTGGGATATAGATGAAGAAGAAAGGATTTTGGACCCGG
rJMSF034F07+          TATATATTGCGAAGTTAGAAGGTTGGGATATAGATGAAGAAGAAAGGATTTTGGACCCGG
                      ____________________________________________________________
consensus             TATATATTGCGAAGTTAGAAGGTTGGGATATAGATGAAGAAGAAAGGATTTTGGACCCGG
 
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rJMFF024K21+          AGTTACTAGCAGAGATTATGGAAATCAGGGAAGCTATTGAAGAAGCGGGAGACTCGGAGG
rJMSF034F07+          AGTTACTAGCAGAGATTATGGAAATCAGGGAAGCTATTGAAGAAGCGGGAGACTCGGAGG
                      ____________________________________________________________
consensus             AGTTACTAGCAGAGATTATGGAAATCAGGGAAGCTATTGAAGAAGCGGGAGACTCGGAGG
 
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rJMFF024K21+          CGCTGAAACATATTCAGGCACAGATACAGGAAGAGTTTGAAGAGTGGTCGAAATCTTTTG
rJMSF034F07+          CGCTGAAACATATTCAGGCACAGATACAGGAAGAGTTTGAAGAGTGGTCGAAATCTTTTG
                      ____________________________________________________________
consensus             CGCTGAAACATATTCAGGCACAGATACAGGAAGAGTTTGAAGAGTGGTCGAAATCTTTTG
 
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rJMFF024K21+          CAATCGCGCTCGAAAATAGAGATGGTGAAGAAGGTGTGTCATGTATCAGAAGAATGACAT
rJMSF034F07+          CAATCGCGCTCGAAAATAGAGATGGTGAAGAAGGTGTGTCATGTATCAGAAGAATGACAT
                      ____________________________________________________________
consensus             CAATCGCGCTCGAAAATAGAGATGGTGAAGAAGGTGTGTCATGTATCAGAAGAATGACAT
 
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rJMFF024K21+          ACTACAAGAGGGCAAATGAAGAAATCATCAAGAAACTGTGAGACTGGAAACACCATTCCA
rJMSF034F07+          ACTACAAGAGGGCAAATGAAGAAATCATCAAGAAACTGTGAGACTGGAAACACCATTCCA
                      ____________________________________________________________
consensus             ACTACAAGAGGGCAAATGAAGAAATCATCAAGAAACTGTGAGACTGGAAACACCATTCCA
 
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rJMFF024K21+          ACATTGCTCATTTGCTGGGTGGGATGGGATTTATATTGAAAAGTAGTTTCTTACTAACCA
rJMSF034F07+          ACATTGCTCATTTGCTGGGTGGGATGGGATTTATATTGAAAAGTAGTTTCTTACTAACCA
                      ____________________________________________________________
consensus             ACATTGCTCATTTGCTGGGTGGGATGGGATTTATATTGAAAAGTAGTTTCTTACTAACCA
 
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rJMFF024K21+          AACATTTATTTATTAGTTAAAATGTCTTTATGGAAGATTAACTTAACATGCTAATAAGGA
rJMSF034F07+          AACATTTATTTATTAGTTAAAATGTCTTTATGGAAGATTAACTTAACATGCTAATAAGGA
                      ____________________________________________________________
consensus             AACATTTATTTATTAGTTAAAATGTCTTTATGGAAGATTAACTTAACATGCTAATAAGGA
 
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rJMFF024K21+          CAGACAGGATTGTTTTAGACATCTCAGAA                               
rJMSF034F07+          CAGACAGGATTGTTTTAGACATCTCAGAATAAAAATTTTGCTCGTTCTCCAGGTGAATGT
                      ____________________________________________________________
consensus             CAGACAGGATTGTTTTAGACATCTCAGAATAAAAATTTTGCTCGTTCTCCAGGTGAATGT