Contig 011355:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001A02Sequence293011355 (6)ref|XP_004250633.1|68.6PREDICTED: carboxymethylenebutenolidase homolog [Solanum lycopersicum]774011355 (6)ref|XP_009790543.1|360PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]
JMSF030J11Sequence615011355 (6)ref|XP_009603635.1|238PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana tomentosiformis]782011355 (6)ref|XP_009790543.1|382PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]
JMSF032B21Sequence668011355 (6)ref|XP_009790543.1|276PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]675011355 (6)ref|XP_009790543.1|273PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF001A02- GGTG
JMSF030J11- G
JMSF032B21- G
                      ____________________________________________________________
consensus GGTG
 
. : . : . : . : . : . :
JMSF001A02- TTGTCATCAAGGTAAAGACTTTCACAACGAACTCAAAACATTGGAGAATAACAAAAATGG
JMSF030J11- TTGTCATCAAGGTAAAGACTTTCACAACGAACTCAAAACATTGGAGAATAACAAAAATGG
JMSF032B21- TTGTCATCAAGGTAAAGACTTTCACAACGAACTCAAAACATTGGAGAATAACAAAAATGG
                      ____________________________________________________________
consensus TTGTCATCAAGGTAAAGACTTTCACAACGAACTCAAAACATTGGAGAATAACAAAAATGG
 
. : . : . : . : . : . :
JMSF001A02- CTATGGCGGCCATGGGGTCGGCTCCTTTGTTCACTGCTCCTGAAACTATAAAACCGCCAT
JMSF030J11- CTATGGCGGCCATGGGGTCGGCTCCTTTGTTCACTGCTCCTGAAACTATAAAACCGCCAT
JMSF032B21- CTATGGCGGCCATGGGGTCGGCTCCTTTGTTCACTGCTCCTGAAACTATAAAACCGCCAT
                      ____________________________________________________________
consensus CTATGGCGGCCATGGGGTCGGCTCCTTTGTTCACTGCTCCTGAAACTATAAAACCGCCAT
 
. : . : . : . : . : . :
JMSF001A02- TTCTAAAACCACTTCCTACCCCGCCAGCTCTTTCGCTCTCT-----------AGAAGCAA
JMSF030J11- TTCTAAAACCACTTCCTACCCCGCCAGCTCTTTCGCTCTCTTTATTGTCCAGAGAAGCAA
JMSF032B21- TTCTAAAACCACTTCCTACCCCGCCAGCTCTTTCGCTCTCT-----------AGAAGCAA
                      ____________________________________________________________
consensus TTCTAAAACCACTTCCTACCCCGCCAGCTCTTTCGCTCTCT-----------AGAAGCAA
 
. : . : . : . : . : . :
JMSF001A02- TGTAAACTGTTGGGGCGCGTCTTTGTCTTTCACAAAGACTAAGAAACATAATGTGTGTTG
JMSF030J11- TGTAAACTGTTGGGGCGCGTCTTTGTCTTTCACAAAGACTAAGAAACATAATGTGTGTTG
JMSF032B21- TGTAAACTGTTGGGGCGCGTCTTTGTCTTTCACAAAGACTAAGAAACATAATGTGTGTTG
rJMSF030J11+ AACATAATGTGTGTTG
                      ____________________________________________________________
consensus TGTAAACTGTTGGGGCGCGTCTTTGTCTTTCACAAAGACTAAGAAACATAATGTGTGTTG
 
. : . : . : . : . : . :
JMSF001A02- TTGCCAAGTAAAAGTAGAGGACGAGGCTTGTGAACTAGTCNATGGAGTGGAGCTGTCGAT
JMSF030J11- TTGCCAAGTAAAAGTAGAGGACGAGGCTTGTGAACTAGTCAATGGAGTGGAGCTGTCGAT
JMSF032B21- TTGCCAAGTAAAAGTAGAGGACGAGGCTTGTGAACTAGTCAATGGAGTGGAGCTGTCGAT
rJMSF030J11+ TTGCCAAGTAAAAGTAGAGGACGAGGCTTGTGAACTAGTCAATGGAGTGGAGCTGTCGAT
rJMSF001A02+ TAGTCAATGGAGTGGAGCTGTCGAT
                      ____________________________________________________________
consensus TTGCCAAGTAAAAGTAGAGGACGAGGCTTGTGAACTAGTCAATGGAGTGGAGCTGTCGAT
 
. : . : . : . : . : . :
JMSF030J11- AGGGGATGAAGGTGATAGCATCGACGCTTATCTTTTGACGGCTGTCAAGAACAACAATGG
JMSF032B21- AGGGGATGAAGGTGATAGCATCGACGCTTATCTTTTGACGGCTGTCAAGAACAACAATGG
rJMSF030J11+ AGGGGATGAAGGTGATAGCATCGACGCTTATCTTTTGACGGCTGTCAAGAACAACAATGG
rJMSF001A02+ AGGGGATGAAGGTGATAGCATCGACGCTTATCTTTTGACGGCTGTCAAGAACAACAATGG
                      ____________________________________________________________
consensus AGGGGATGAAGGTGATAGCATCGACGCTTATCTTTTGACGGCTGTCAAGAACAACAATGG
 
. : . : . : . : . : . :
JMSF030J11- GACTGGCATATTGCTTTTATCTGATGTTTTTGGGTTTGAAGACTCGTTTACCAGAGATTT
JMSF032B21- GACTGGCATATTGCTTTTATCTGATGTTTTTGGGTTTGAAGACTCGTTTACCAGAGATTT
rJMSF030J11+ GACTGGCATATTGCTTTTATCTGATGTTTTTGGGTTTGAAGACTCGTTTACCAGAGATTT
rJMSF001A02+ GACTGGCATATTGCTTTTATCTGATGTTTTTGGGTTTGAAGACTCGTTTACCAGAGATTT
rJMSF032B21+ TCGTTTACCAGAGATTT
                      ____________________________________________________________
consensus GACTGGCATATTGCTTTTATCTGATGTTTTTGGGTTTGAAGACTCGTTTACCAGAGATTT
 
. : . : . : . : . : . :
JMSF030J11- TGCATACCGTGTTGCTTGCAATGGTTACAATGTCCTAGTGCCGGACTTGTTTCGTGGAGA
JMSF032B21- TGCATACCGTGTTGCTTGCAATGGTTACAATGTCCTAGTGCCGGACTTGTTTCGTGGAGA
rJMSF030J11+ TGCATACCGTGTTGCTTGCAATGGTTACAATGTCCTAGTGCCGGACTTGTTTCGTGGAGA
rJMSF001A02+ TGCATACCGTGTTGCTTGCAATGGTTACAATGTCCTAGTGCCGGACTTGTTTCGTGGAGA
rJMSF032B21+ TGCATACCGTGTTGC-TGCAATGGTTACAATGTCCTAGTGCCGGACTTGTTTCGTGGAGA
                      ____________________________________________________________
consensus TGCATACCGTGTTGCTTGCAATGGTTACAATGTCCTAGTGCCGGACTTGTTTCGTGGAGA
 
. : . : . : . : . : . :
JMSF030J11- TCCATGGGGAAAGGACCGCCCAGCTGCATCATTTGAACAGTGGATTGGTAAACAAGACAG
JMSF032B21- TCCATGGGGAAAGGACCGCCCAGCTGCATCATTTGAACAGTGGATTGGTAAACAAGACAG
rJMSF030J11+ TCCATGGGGAAAGGACCGCCCAGCTGCATCATTTGAACAGTGGATTGGTAAACAAGACAG
rJMSF001A02+ TCCATGGGGAAAGGACCGCCCAGCTGCGTCATTTGAACAGTGGATTGGTAAACAAGACAG
rJMSF032B21+ TCCATGGGGAAAGGACCGCCCAGCTGCATCATTTGAACAGTGGATTGGTAAACAAGACAG
                      ____________________________________________________________
consensus TCCATGGGGAAAGGACCGCCCAGCTGCATCATTTGAACAGTGGATTGGTAAACAAGACAG
 
. : . : . : . : . : . :
JMSF030J11- AAATCGGGTTATACAGGACACTTTTACATCAGTAGAATGGATGGTCAATGAATTTGTAGC
JMSF032B21- AAATCGGGTTATACAGGACACTTTTACATCAGTAGAATGGATGGTCAATGAATTTGTAGC
rJMSF030J11+ AAATCGGGTTATACAGGACACTTTTACATCAGTAGAATGGATGGTCAATGAATTTGTAGC
rJMSF001A02+ AAATCGGGTTATACAGGACACTTTTACATCAGTAGAATGGATGGTCAATGAATTTGTAGC
rJMSF032B21+ AAATCGGGTTATACAGGACACTTTTACATCAGTAGAATGGATGGTCAATGAATTTGTAGC
                      ____________________________________________________________
consensus AAATCGGGTTATACAGGACACTTTTACATCAGTAGAATGGATGGTCAATGAATTTGTAGC
 
. : . : . : . : . : . :
JMSF030J11- TGCAGGGATTTC
JMSF032B21- TGCAGGGATTTCAAAGAAGCTTGGTGTGATTGGATTTTGCTATGGGGGCGGCCTAACATT
rJMSF030J11+ TGCAGGGATTTCAAAGAAGCTTGGTGTGATTGGATTTTGCTATGGGGGCGGCCTAACATT
rJMSF001A02+ TGCAGGGATTTCAAAGAAGCTTGGTGTGATTGGATTTTGCTATGGGGGCGGCCTAACATT
rJMSF032B21+ TGCAGGGATTTCAAAGAAGCTTGGTGTGATTGGATTTTGCTATGGGGGCGGCCTAACATT
                      ____________________________________________________________
consensus TGCAGGGATTTCAAAGAAGCTTGGTGTGATTGGATTTTGCTATGGGGGCGGCCTAACATT
 
. : . : . : . : . : . :
JMSF032B21- AGACATTCTTGCAAAAG
rJMSF030J11+ AGACATTCTTGCAAAAGACCAGGGCTCCTCTTTCGGTGCTGGGATCTCATTCTACGGCAC
rJMSF001A02+ AGACATTCTTGCAAAAGACCAGGGCTCCTCTTTCGGTGCTGGGATCTCATTCTACGGCAC
rJMSF032B21+ AGACATTCTTGCAAAAGACCAGGGCTCCTCTTTCGGTGCTGGGATCTCATTCTACGGCAC
                      ____________________________________________________________
consensus AGACATTCTTGCAAAAGACCAGGGCTCCTCTTTCGGTGCTGGGATCTCATTCTACGGCAC
 
. : . : . : . : . : . :
rJMSF030J11+ AAGGATAAACACCTCTCTCTCTACTAAAATAAAATCACCGCTGCTGCTAATCTCCGGCAA
rJMSF001A02+ AAGGATAAACACCTCTCTCTCTACTAAAATAAAATCACCGCTGCTGCTAATCTCCGGCAA
rJMSF032B21+ AAGGATAAACACCTCTCTCTCTACTAAAATAAAATCACCGCTGCTGCTAATCTCCGGCAA
                      ____________________________________________________________
consensus AAGGATAAACACCTCTCTCTCTACTAAAATAAAATCACCGCTGCTGCTAATCTCCGGCAA
 
. : . : . : . : . : . :
rJMSF030J11+ TGATGATCCACTTTGCCCGGTTAGTGTACTGAACAATGTAGCTAAAGATGTTGAGAAGAG
rJMSF001A02+ TGATGATCCACTTTGCCCGGTTAGTGTACTGAACAATGTAGCTAAAGATGTTGAGAAGAG
rJMSF032B21+ TGATGATCCACTTTGCCCGGTTAGTGTACTGAACAATGTAGCTAAAGATGTTGAGAAGAG
                      ____________________________________________________________
consensus TGATGATCCACTTTGCCCGGTTAGTGTACTGAACAATGTAGCTAAAGATGTTGAGAAGAG
 
. : . : . : . : . : . :
rJMSF030J11+ TAAGGTGGTGGTTTTTAAGGGAAGGGGTCATGGTTTTGTCCACAGGCCTCAGTCTCCTGA
rJMSF001A02+ TAAGGTGGTGGTTTTTAAGGGAAGGGGTCATGGTTTTGTCCACAGGCCTCAGTCTCCTGA
rJMSF032B21+ TAAGGTGGTGGTTTTTAAGGGAAGGGGTCATGGTTTTGTCCACAGGCCTCAGTCTCCTGA
                      ____________________________________________________________
consensus TAAGGTGGTGGTTTTTAAGGGAAGGGGTCATGGTTTTGTCCACAGGCCTCAGTCTCCTGA
 
. : . : . : . : . : . :
rJMSF030J11+ AGAAGACAGAGATGCAGAAGAGGCTTTTGTGATCATGAGAAGTTGGCTCAATGATTTCTT
rJMSF001A02+ AGAAGACAGAGATGCAGAAGAGGCTTTTGTGATCATGAGAAGTTGGCTCAATGATTTCTT
rJMSF032B21+ AGAAGACAGAGATGCAGAAGAGGCTTTTGTGATCATGAGAAGTTGGCTCAATGATTTCTT
                      ____________________________________________________________
consensus AGAAGACAGAGATGCAGAAGAGGCTTTTGTGATCATGAGAAGTTGGCTCAATGATTTCTT
 
. : . : . : . : . : . :
rJMSF030J11+ GCCTGAACAAAATTGACAATGGCAGTTATTTGTTACCTAAGGAATA
rJMSF001A02+ GCCTGAACAAAATTGACAATGGCAGTTATTTGTTACCTAAGGAATAATATATTCCTTTTC
rJMSF032B21+ GCCTGAACAAAATTGACAATGGCAGTTATTTGTTACCTAAGGAATAATATATTCC-TTTC
                      ____________________________________________________________
consensus GCCTGAACAAAATTGACAATGGCAGTTATTTGTTACCTAAGGAATAATATATTCCTTTTC
 
. : . : . : . : . : . :
rJMSF001A02+ CTTTGTGAATTCTTGGTTTATTATATCTT
rJMSF032B21+ CTTTGTGAATTCTTGGTTTATTATATCTTTTGGTACCCAAAAAGAAATGCATGAAGAAGA
                      ____________________________________________________________
consensus CTTTGTGAATTCTTGGTTTATTATATCTTTTGGTACCCAAAAAGAAATGCATGAAGAAGA