Contig 011355:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001A02Sequence293011355 (6)ref|XP_004250633.1|68.6PREDICTED: carboxymethylenebutenolidase homolog [Solanum lycopersicum]774011355 (6)ref|XP_009790543.1|360PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]
JMSF030J11Sequence615011355 (6)ref|XP_009603635.1|238PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana tomentosiformis]782011355 (6)ref|XP_009790543.1|382PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]
JMSF032B21Sequence668011355 (6)ref|XP_009790543.1|276PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]675011355 (6)ref|XP_009790543.1|273PREDICTED: carboxymethylenebutenolidase homolog [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF001A02-                                                                   GGTG
JMSF030J11-                                                                      G
JMSF032B21-                                                                      G
                      ____________________________________________________________
consensus                                                                     GGTG
 
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JMSF001A02-           TTGTCATCAAGGTAAAGACTTTCACAACGAACTCAAAACATTGGAGAATAACAAAAATGG
JMSF030J11-           TTGTCATCAAGGTAAAGACTTTCACAACGAACTCAAAACATTGGAGAATAACAAAAATGG
JMSF032B21-           TTGTCATCAAGGTAAAGACTTTCACAACGAACTCAAAACATTGGAGAATAACAAAAATGG
                      ____________________________________________________________
consensus             TTGTCATCAAGGTAAAGACTTTCACAACGAACTCAAAACATTGGAGAATAACAAAAATGG
 
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JMSF001A02-           CTATGGCGGCCATGGGGTCGGCTCCTTTGTTCACTGCTCCTGAAACTATAAAACCGCCAT
JMSF030J11-           CTATGGCGGCCATGGGGTCGGCTCCTTTGTTCACTGCTCCTGAAACTATAAAACCGCCAT
JMSF032B21-           CTATGGCGGCCATGGGGTCGGCTCCTTTGTTCACTGCTCCTGAAACTATAAAACCGCCAT
                      ____________________________________________________________
consensus             CTATGGCGGCCATGGGGTCGGCTCCTTTGTTCACTGCTCCTGAAACTATAAAACCGCCAT
 
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JMSF001A02-           TTCTAAAACCACTTCCTACCCCGCCAGCTCTTTCGCTCTCT-----------AGAAGCAA
JMSF030J11-           TTCTAAAACCACTTCCTACCCCGCCAGCTCTTTCGCTCTCTTTATTGTCCAGAGAAGCAA
JMSF032B21-           TTCTAAAACCACTTCCTACCCCGCCAGCTCTTTCGCTCTCT-----------AGAAGCAA
                      ____________________________________________________________
consensus             TTCTAAAACCACTTCCTACCCCGCCAGCTCTTTCGCTCTCT-----------AGAAGCAA
 
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JMSF001A02-           TGTAAACTGTTGGGGCGCGTCTTTGTCTTTCACAAAGACTAAGAAACATAATGTGTGTTG
JMSF030J11-           TGTAAACTGTTGGGGCGCGTCTTTGTCTTTCACAAAGACTAAGAAACATAATGTGTGTTG
JMSF032B21-           TGTAAACTGTTGGGGCGCGTCTTTGTCTTTCACAAAGACTAAGAAACATAATGTGTGTTG
rJMSF030J11+                                                      AACATAATGTGTGTTG
                      ____________________________________________________________
consensus             TGTAAACTGTTGGGGCGCGTCTTTGTCTTTCACAAAGACTAAGAAACATAATGTGTGTTG
 
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JMSF001A02-           TTGCCAAGTAAAAGTAGAGGACGAGGCTTGTGAACTAGTCNATGGAGTGGAGCTGTCGAT
JMSF030J11-           TTGCCAAGTAAAAGTAGAGGACGAGGCTTGTGAACTAGTCAATGGAGTGGAGCTGTCGAT
JMSF032B21-           TTGCCAAGTAAAAGTAGAGGACGAGGCTTGTGAACTAGTCAATGGAGTGGAGCTGTCGAT
rJMSF030J11+          TTGCCAAGTAAAAGTAGAGGACGAGGCTTGTGAACTAGTCAATGGAGTGGAGCTGTCGAT
rJMSF001A02+                                             TAGTCAATGGAGTGGAGCTGTCGAT
                      ____________________________________________________________
consensus             TTGCCAAGTAAAAGTAGAGGACGAGGCTTGTGAACTAGTCAATGGAGTGGAGCTGTCGAT
 
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JMSF030J11-           AGGGGATGAAGGTGATAGCATCGACGCTTATCTTTTGACGGCTGTCAAGAACAACAATGG
JMSF032B21-           AGGGGATGAAGGTGATAGCATCGACGCTTATCTTTTGACGGCTGTCAAGAACAACAATGG
rJMSF030J11+          AGGGGATGAAGGTGATAGCATCGACGCTTATCTTTTGACGGCTGTCAAGAACAACAATGG
rJMSF001A02+          AGGGGATGAAGGTGATAGCATCGACGCTTATCTTTTGACGGCTGTCAAGAACAACAATGG
                      ____________________________________________________________
consensus             AGGGGATGAAGGTGATAGCATCGACGCTTATCTTTTGACGGCTGTCAAGAACAACAATGG
 
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JMSF030J11-           GACTGGCATATTGCTTTTATCTGATGTTTTTGGGTTTGAAGACTCGTTTACCAGAGATTT
JMSF032B21-           GACTGGCATATTGCTTTTATCTGATGTTTTTGGGTTTGAAGACTCGTTTACCAGAGATTT
rJMSF030J11+          GACTGGCATATTGCTTTTATCTGATGTTTTTGGGTTTGAAGACTCGTTTACCAGAGATTT
rJMSF001A02+          GACTGGCATATTGCTTTTATCTGATGTTTTTGGGTTTGAAGACTCGTTTACCAGAGATTT
rJMSF032B21+                                                     TCGTTTACCAGAGATTT
                      ____________________________________________________________
consensus             GACTGGCATATTGCTTTTATCTGATGTTTTTGGGTTTGAAGACTCGTTTACCAGAGATTT
 
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JMSF030J11-           TGCATACCGTGTTGCTTGCAATGGTTACAATGTCCTAGTGCCGGACTTGTTTCGTGGAGA
JMSF032B21-           TGCATACCGTGTTGCTTGCAATGGTTACAATGTCCTAGTGCCGGACTTGTTTCGTGGAGA
rJMSF030J11+          TGCATACCGTGTTGCTTGCAATGGTTACAATGTCCTAGTGCCGGACTTGTTTCGTGGAGA
rJMSF001A02+          TGCATACCGTGTTGCTTGCAATGGTTACAATGTCCTAGTGCCGGACTTGTTTCGTGGAGA
rJMSF032B21+          TGCATACCGTGTTGC-TGCAATGGTTACAATGTCCTAGTGCCGGACTTGTTTCGTGGAGA
                      ____________________________________________________________
consensus             TGCATACCGTGTTGCTTGCAATGGTTACAATGTCCTAGTGCCGGACTTGTTTCGTGGAGA
 
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JMSF030J11-           TCCATGGGGAAAGGACCGCCCAGCTGCATCATTTGAACAGTGGATTGGTAAACAAGACAG
JMSF032B21-           TCCATGGGGAAAGGACCGCCCAGCTGCATCATTTGAACAGTGGATTGGTAAACAAGACAG
rJMSF030J11+          TCCATGGGGAAAGGACCGCCCAGCTGCATCATTTGAACAGTGGATTGGTAAACAAGACAG
rJMSF001A02+          TCCATGGGGAAAGGACCGCCCAGCTGCGTCATTTGAACAGTGGATTGGTAAACAAGACAG
rJMSF032B21+          TCCATGGGGAAAGGACCGCCCAGCTGCATCATTTGAACAGTGGATTGGTAAACAAGACAG
                      ____________________________________________________________
consensus             TCCATGGGGAAAGGACCGCCCAGCTGCATCATTTGAACAGTGGATTGGTAAACAAGACAG
 
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JMSF030J11-           AAATCGGGTTATACAGGACACTTTTACATCAGTAGAATGGATGGTCAATGAATTTGTAGC
JMSF032B21-           AAATCGGGTTATACAGGACACTTTTACATCAGTAGAATGGATGGTCAATGAATTTGTAGC
rJMSF030J11+          AAATCGGGTTATACAGGACACTTTTACATCAGTAGAATGGATGGTCAATGAATTTGTAGC
rJMSF001A02+          AAATCGGGTTATACAGGACACTTTTACATCAGTAGAATGGATGGTCAATGAATTTGTAGC
rJMSF032B21+          AAATCGGGTTATACAGGACACTTTTACATCAGTAGAATGGATGGTCAATGAATTTGTAGC
                      ____________________________________________________________
consensus             AAATCGGGTTATACAGGACACTTTTACATCAGTAGAATGGATGGTCAATGAATTTGTAGC
 
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JMSF030J11-           TGCAGGGATTTC                                                
JMSF032B21-           TGCAGGGATTTCAAAGAAGCTTGGTGTGATTGGATTTTGCTATGGGGGCGGCCTAACATT
rJMSF030J11+          TGCAGGGATTTCAAAGAAGCTTGGTGTGATTGGATTTTGCTATGGGGGCGGCCTAACATT
rJMSF001A02+          TGCAGGGATTTCAAAGAAGCTTGGTGTGATTGGATTTTGCTATGGGGGCGGCCTAACATT
rJMSF032B21+          TGCAGGGATTTCAAAGAAGCTTGGTGTGATTGGATTTTGCTATGGGGGCGGCCTAACATT
                      ____________________________________________________________
consensus             TGCAGGGATTTCAAAGAAGCTTGGTGTGATTGGATTTTGCTATGGGGGCGGCCTAACATT
 
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JMSF032B21-           AGACATTCTTGCAAAAG                                           
rJMSF030J11+          AGACATTCTTGCAAAAGACCAGGGCTCCTCTTTCGGTGCTGGGATCTCATTCTACGGCAC
rJMSF001A02+          AGACATTCTTGCAAAAGACCAGGGCTCCTCTTTCGGTGCTGGGATCTCATTCTACGGCAC
rJMSF032B21+          AGACATTCTTGCAAAAGACCAGGGCTCCTCTTTCGGTGCTGGGATCTCATTCTACGGCAC
                      ____________________________________________________________
consensus             AGACATTCTTGCAAAAGACCAGGGCTCCTCTTTCGGTGCTGGGATCTCATTCTACGGCAC
 
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rJMSF030J11+          AAGGATAAACACCTCTCTCTCTACTAAAATAAAATCACCGCTGCTGCTAATCTCCGGCAA
rJMSF001A02+          AAGGATAAACACCTCTCTCTCTACTAAAATAAAATCACCGCTGCTGCTAATCTCCGGCAA
rJMSF032B21+          AAGGATAAACACCTCTCTCTCTACTAAAATAAAATCACCGCTGCTGCTAATCTCCGGCAA
                      ____________________________________________________________
consensus             AAGGATAAACACCTCTCTCTCTACTAAAATAAAATCACCGCTGCTGCTAATCTCCGGCAA
 
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rJMSF030J11+          TGATGATCCACTTTGCCCGGTTAGTGTACTGAACAATGTAGCTAAAGATGTTGAGAAGAG
rJMSF001A02+          TGATGATCCACTTTGCCCGGTTAGTGTACTGAACAATGTAGCTAAAGATGTTGAGAAGAG
rJMSF032B21+          TGATGATCCACTTTGCCCGGTTAGTGTACTGAACAATGTAGCTAAAGATGTTGAGAAGAG
                      ____________________________________________________________
consensus             TGATGATCCACTTTGCCCGGTTAGTGTACTGAACAATGTAGCTAAAGATGTTGAGAAGAG
 
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rJMSF030J11+          TAAGGTGGTGGTTTTTAAGGGAAGGGGTCATGGTTTTGTCCACAGGCCTCAGTCTCCTGA
rJMSF001A02+          TAAGGTGGTGGTTTTTAAGGGAAGGGGTCATGGTTTTGTCCACAGGCCTCAGTCTCCTGA
rJMSF032B21+          TAAGGTGGTGGTTTTTAAGGGAAGGGGTCATGGTTTTGTCCACAGGCCTCAGTCTCCTGA
                      ____________________________________________________________
consensus             TAAGGTGGTGGTTTTTAAGGGAAGGGGTCATGGTTTTGTCCACAGGCCTCAGTCTCCTGA
 
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rJMSF030J11+          AGAAGACAGAGATGCAGAAGAGGCTTTTGTGATCATGAGAAGTTGGCTCAATGATTTCTT
rJMSF001A02+          AGAAGACAGAGATGCAGAAGAGGCTTTTGTGATCATGAGAAGTTGGCTCAATGATTTCTT
rJMSF032B21+          AGAAGACAGAGATGCAGAAGAGGCTTTTGTGATCATGAGAAGTTGGCTCAATGATTTCTT
                      ____________________________________________________________
consensus             AGAAGACAGAGATGCAGAAGAGGCTTTTGTGATCATGAGAAGTTGGCTCAATGATTTCTT
 
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rJMSF030J11+          GCCTGAACAAAATTGACAATGGCAGTTATTTGTTACCTAAGGAATA              
rJMSF001A02+          GCCTGAACAAAATTGACAATGGCAGTTATTTGTTACCTAAGGAATAATATATTCCTTTTC
rJMSF032B21+          GCCTGAACAAAATTGACAATGGCAGTTATTTGTTACCTAAGGAATAATATATTCC-TTTC
                      ____________________________________________________________
consensus             GCCTGAACAAAATTGACAATGGCAGTTATTTGTTACCTAAGGAATAATATATTCCTTTTC
 
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rJMSF001A02+          CTTTGTGAATTCTTGGTTTATTATATCTT                               
rJMSF032B21+          CTTTGTGAATTCTTGGTTTATTATATCTTTTGGTACCCAAAAAGAAATGCATGAAGAAGA
                      ____________________________________________________________
consensus             CTTTGTGAATTCTTGGTTTATTATATCTTTTGGTACCCAAAAAGAAATGCATGAAGAAGA