Contig 011354:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF019L15+                                      GTACTGCAAATNGGATACCCGCTGTGAACACG
rJMSF032B09+                                                             GTGAACACG
                      ____________________________________________________________
consensus                                         GTACTGCAAATNGGATACCCGCTGTGAACACG
 
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rJMSF019L15+          CACTTTATCTCGGAGAAACTTGCTCTTCTGTTCCCCAACCTCATCTATGGTATTCTTAAG
rJMSF032B09+          CACTTTATCTCGGAGAAACTTGCTCTTCTGNTCCCCAACCTCATCTATGGTATTCTTAAG
                      ____________________________________________________________
consensus             CACTTTATCTCGGAGAAACTTGCTCTTCTGTTCCCCAACCTCATCTATGGTATTCTTAAG
 
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rJMSF019L15+          AAGCAAGGATTCAAGCCCTATAAGGATGAACTTGGTGCTGAAAATACTAGTGTATATGGT
rJMSF032B09+          AAGCAAGGATTCAAGCCCTATAAGGATGAACTTGGTGCTGAAAATACTAGTGTATATGGT
                      ____________________________________________________________
consensus             AAGCAAGGATTCAAGCCCTATAAGGATGAACTTGGTGCTGAAAATACTAGTGTATATGGT
 
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rJMSF019L15+          TTTGATGATCGATTGGTCCAATGACAGCATTATGATGATCGTGCCACACTTGCTGATCCT
rJMSF032B09+          TTTGATGATCGATTGGTCCAATGACAGCATTATGATGATCGTGCCACACTTGCTGATCCT
                      ____________________________________________________________
consensus             TTTGATGATCGATTGGTCCAATGACAGCATTATGATGATCGTGCCACACTTGCTGATCCT
 
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rJMSF019L15+          CCTGCCTCTACTGCTCCAATGCCTTCTACATCTGCTCCAGCGTTTTATAATGAGACAGAG
rJMSF032B09+          CCTGCCTCTACTGCTCCAATGCCTTCTACATCTGCTCCAGCGTTTTATAATGAGACAGAG
                      ____________________________________________________________
consensus             CCTGCCTCTACTGCTCCAATGCCTTCTACATCTGCTCCAGCGTTTTATAATGAGACAGAG
 
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rJMSF019L15+          TCATCTCAAGCTCCTGCCTCTTCTTCTATGCCTAATGAGCCTCCAGCGTTGATTACTCAC
rJMSF032B09+          TCATCTCAAGCTCCTGCCTCTTCTTCTATGCCTAATGAGCCTCCAGCGTTGATTACTCAC
                      ____________________________________________________________
consensus             TCATCTCAAGCTCCTGCCTCTTCTTCTATGCCTAATGAGCCTCCAGCGTTGATTACTCAC
 
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rJMSF019L15+          CGTCAGCTGGCATATACAATTAAGACTTTGATTGCTCAACTTCGCAGGTCTTTCACTTCT
rJMSF032B09+          CGTCAGCTGGCATATACAATTAAGACTTTGATTGCTCAACTTCGCAGGTCTTTCACTTCT
                      ____________________________________________________________
consensus             CGTCAGCTGGCATATACAATTAAGACTTTGATTGCTCAACTTCGCAGGTCTTTCACTTCT
 
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rJMSF019L15+          CAACAAACTATGGTTGCAGGGTTAGAGAAGATTCTGGAAGTGCATCTGCGCGAGATTTCA
rJMSF032B09+          CAACAAACTATGGTTGCAGGGTTAGAGAAGATTCTGGAAGTGCATCTGCGCGAGATTTCA
                      ____________________________________________________________
consensus             CAACAAACTATGGTTGCAGGGTTAGAGAAGATTCTGGAAGTGCATCTGCGCGAGATTTCA
 
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rJMSF019L15+          AGGCTGGAAAAGTTGCATGCTGAAATTCTAGCCAACAGGGGTGCTACTTCTGGCTCTGAT
rJMSF032B09+          AGGCTGGAAAAGTTGCATGCTGAAATTCTAGCCAACAGGGGTGCTACTTCTGGCTCTGAT
                      ____________________________________________________________
consensus             AGGCTGGAAAAGTTGCATGCTGAAATTCTAGCCAACAGGGGTGCTACTTCTGGCTCTGAT
 
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rJMSF019L15+          GCAGCAGACGATTCTAATGATGCTGTTTCTGGTTATGTAGGCTCTTCTGATTCTAGTTAC
rJMSF032B09+          GCAGCAGACGATTCTAATGATGCTGTTTCTGGTTATGTAGGCTCTTCTGATTCTAGTTAC
                      ____________________________________________________________
consensus             GCAGCAGACGATTCTAATGATGCTGTTTCTGGTTATGTAGGCTCTTCTGATTCTAGTTAC
 
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rJMSF019L15+          ACTCCATCAGCCCGATGATGCTCACCACTGATGTTCACCACTTTATCAATTTATTGGCAA
rJMSF032B09+          ACTCCATCAGCCCGATGATGCTCACCACTGATGTTCACCACTTTATCAATTTATTGGCAA
                      ____________________________________________________________
consensus             ACTCCATCAGCCCGATGATGCTCACCACTGATGTTCACCACTTTATCAATTTATTGGCAA
 
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rJMSF019L15+          AAAGGGGAGTGTGATAAGGGGGAGCATGGTTTGTTATGGTTTGTTTTGGTATGATAAACT
rJMSF032B09+          AAAGGGGAGTGTGATAAGGGGGAGCATGGTTTGTTATGGTTTGTTTTGGTATGATAAACT
                      ____________________________________________________________
consensus             AAAGGGGAGTGTGATAAGGGGGAGCATGGTTTGTTATGGTTTGTTTTGGTATGATAAACT
 
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rJMSF019L15+          AGTACTTTTGTTGCTTTCTGACAGTATTGTGCATACTTTCGTTGG               
rJMSF032B09+          AGTACTTTTGTTGCTTTCTGACAGTATTGTGCATACTTTCGTTGGTTGGATGTTTAGCTT
                      ____________________________________________________________
consensus             AGTACTTTTGTTGCTTTCTGACAGTATTGTGCATACTTTCGTTGGTTGGATGTTTAGCTT