Contig 011346:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN011E07Sequence643011346 (2)ref|XP_004253126.1|248PREDICTED: uncharacterized protein LOC101250784 [Solanum lycopersicum]
JMSF030C18Sequence676018949ref|XP_009785660.1|194PREDICTED: uncharacterized protein LOC104233897 [Nicotiana sylvestris]729011346 (2)ref|XP_004253126.1|310PREDICTED: uncharacterized protein LOC101250784 [Solanum lycopersicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011E07+                                       TATAATAATATACTATATTCAATAATTCTGAT
rJMSF030C18-                                                             AATTCTGAT
                      ____________________________________________________________
consensus                                         TATAATAATATACTATATTCAATAATTCTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011E07+           CTATACTAGCTAGAGTCTGCCCCTCCGGCCTATATATACAAGACAGACGGCACCGACATT
rJMSF030C18-          CTATACTAGCTAGAGTCTGCCCCTCCGGCCTATATATACAAGACAGACGGCACCGACATT
                      ____________________________________________________________
consensus             CTATACTAGCTAGAGTCTGCCCCTCCGGCCTATATATACAAGACAGACGGCACCGACATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011E07+           CATTAAATAATTAAAAATATAATAGTGTGGCCGGGTTTAGCCAGTCACAGTCCCAGATTT
rJMSF030C18-          CATTAAATAATTAAAAATATAATAGTGTGGCCGGGTTTAGCCAGTCACAGTCCCAGATTT
                      ____________________________________________________________
consensus             CATTAAATAATTAAAAATATAATAGTGTGGCCGGGTTTAGCCAGTCACAGTCCCAGATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011E07+           TAAGCCGCCAAGCAAGCCTAGCTCGCATATCTCCACTGCAGAAGGAGCCTTCCATGATGC
rJMSF030C18-          TAAGCCGCCAAGCAAGCCTAGCTCGCATATCTCCACTGCAGAAGGAGCCTTCCATGATGC
                      ____________________________________________________________
consensus             TAAGCCGCCAAGCAAGCCTAGCTCGCATATCTCCACTGCAGAAGGAGCCTTCCATGATGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011E07+           CGACTTCAATTTCATCGCCTTGAAGTCCCTTATACATCCTTGAACACTCAGCTTCTTCAC
rJMSF030C18-          CGACTTCAATTTCATCGCCTTGAAGTCCCTTATACATCCTTGAACACTCAGCTTCTTCAC
                      ____________________________________________________________
consensus             CGACTTCAATTTCATCGCCTTGAAGTCCCTTATACATCCTTGAACACTCAGCTTCTTCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011E07+           TCGCTTCCGGGCTGCACCCAGCTTCTTACCGGCAACTTCATCGAATAATTTCTCCCATCC
rJMSF030C18-          TCGCTTCCGGGCTGCACCCAGCTTCTTACCGGCAACTTCATCGAATAATTTCTCCCATCC
                      ____________________________________________________________
consensus             TCGCTTCCGGGCTGCACCCAGCTTCTTACCGGCAACTTCATCGAATAATTTCTCCCATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011E07+           TTCCTCCCACTCCCCGTGAGCGTCGCACAGCTCTATGGTGTTGTTCGCCCAATCCGTCCA
rJMSF030C18-          TTCCTCCCACTCCCCGTGAGCGTCGCACAGCTCTATGGTGTTGTTCGCCCAATCCGTCCA
                      ____________________________________________________________
consensus             TTCCTCCCACTCCCCGTGAGCGTCGCACAGCTCTATGGTGTTGTTCGCCCAATCCGTCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011E07+           GCTCCACAATTTGTTGAGGCGGCTCATTACCGGGGGAACGCAAGCCCGACTACACGCAGG
rJMSF030C18-          GCTCCACAATTTGTTGAGGCGGCTCATTACCGGGGGAACGCAAGCCCGACTACACGCAGG
                      ____________________________________________________________
consensus             GCTCCACAATTTGTTGAGGCGGCTCATTACCGGGGGAACGCAAGCCCGACTACACGCAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011E07+           CTTGCAGGGCCTGCATTTTGCCCCGCTTAATGGCCCCGGGCTGGACAGTGCCGCCACGGG
rJMSF030C18-          CTTGCAGGGCCTGCATTTTGCCCCGCTTAATGGCCCCGGGCTGGACAGTGCCGCCACGGG
                      ____________________________________________________________
consensus             CTTGCAGGGCCTGCATTTTGCCCCGCTTAATGGCCCCGGGCTGGACAGTGCCGCCACGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011E07+           GACCCCATTCGCCCCCGGAGGGAAGGGGTATTGCCGATCCGTTACGACGCAGAACGGGAG
rJMSF030C18-          GACCCCATTCGCCCCCGGAGGGAAGGGGTATTGCCGATCCGTTACGACGCAGAACGGGAG
                      ____________________________________________________________
consensus             GACCCCATTCGCCCCCGGAGGGAAGGGGTATTGCCGATCCGTTACGACGCAGAACGGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011E07+           GCGAATAGTCTTGTAAGGTACCTTTTGGGTTGTGAGCTGGGCCTTGAATGCGCTCTCGGA
rJMSF030C18-          GCGAATAGTCTTGTAAGGTACCTTTTGGGTTGTGAGCTGGGCCTTGAATGCGCTCTCGGA
                      ____________________________________________________________
consensus             GCGAATAGTCTTGTAAGGTACCTTTTGGGTTGTGAGCTGGGCCTTGAATGCGCTCTCGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN011E07+           GTTGAGCTGCG                                                 
rJMSF030C18-          GTTGAGCTGCGCATGCCCCCCTGCATCCAACTGGGGAATCATGGAAAGCCGTGACAGAGC
                      ____________________________________________________________
consensus             GTTGAGCTGCGCATGCCCCCCTGCATCCAACTGGGGAATCATGGAAAGCCGTGACAGAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF030C18-          CACCACAGAGGTGTTGAAGTCACCGATGCCGATTCGGTCGTTCAGGCCGCCGTACGATGA
                      ____________________________________________________________
consensus             CACCACAGAGGTGTTGAAGTCACCGATGCCGATTCGGTCGTTCAGGCCGCCGTACGATGA