Contig 011343:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016H03Sequence243009394 (2)ref|XP_009800158.1|2e-19PREDICTED: uncharacterized protein LOC104246111 isoform X1 [Nicotiana sylvestri767011343 (2)ref|XP_002523791.1|1e-98catalytic, putative [Ricinus communis] gb|EEF38517.1| catalytic, putative [Ricin
JMSF029G12Sequence672009394 (2)ref|XP_009800158.1|2e-47PREDICTED: uncharacterized protein LOC104246111 isoform X1 [Nicotiana sylvestri811011343 (2)ref|XP_002523791.1|6e-99catalytic, putative [Ricinus communis] gb|EEF38517.1| catalytic, putative [Ricin

Alignment

This contig is upended


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rJMSF029G12+                                       TACGTGATTGGCATGTCGATGGGAGCATATA
                      ____________________________________________________________
consensus                                          TACGTGATTGGCATGTCGATGGGAGCATATA
 
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rJMSF016H03+                    TGCCTAAAGTACATACCACACAGGTTGGCTGGAGCTTCACTTGTAGTTCC
rJMSF029G12+          TCATTACAGNTGCCTAAAGTACATACCACACAGGTTGGCTGGAGCTTCACTTGTAGTTCC
                      ____________________________________________________________
consensus             TCATTACAGNTGCCTAAAGTACATACCACACAGGTTGGCTGGAGCTTCACTTGTAGTTCC
 
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rJMSF016H03+          GTTTGTCCACTACTGGTGGCCTCATTTTCCCGCTAAAATATCAAAAGAAGCCCTGCAGAA
rJMSF029G12+          GTTTGTCCACTACTGGTGGCCTCATTTTCCCGCTAAAATATCAAAAGAAGCCCTGCAGAA
                      ____________________________________________________________
consensus             GTTTGTCCACTACTGGTGGCCTCATTTTCCCGCTAAAATATCAAAAGAAGCCCTGCAGAA
 
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rJMSF016H03+          ACAACTCATACAAGACCAATGGACATTCAAAATGGCGCATTATGCTCCATGGCTGTTCTA
rJMSF029G12+          ACAACTCATACAAGACCAATGGACATTCAAAATGGCGCATTATGCTCCATGGCTGTTCTA
                      ____________________________________________________________
consensus             ACAACTCATACAAGACCAATGGACATTCAAAATGGCGCATTATGCTCCATGGCTGTTCTA
 
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rJMSF016H03+          TTGGTGGATGACTCAAAAATGGTTTCCTTCTTTAAGTGCTCTGCAAGGGAACATGGCTAT
rJMSF029G12+          TTGGTGGATGACTCAAAAATGGTTTCCTTCTTTAAGTGCTCTGCAAGGGAACATGGCTAT
                      ____________________________________________________________
consensus             TTGGTGGATGACTCAAAAATGGTTTCCTTCTTTAAGTGCTCTGCAAGGGAACATGGCTAT
 
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rJMSF016H03+          TTTCTGCCCCCAAGATCTGGAAACCATAAAGCAGCTAATGGAAGGCCCCCCTAATGACAA
rJMSF029G12+          TTTCTGCCCCCAAGATCTGGAAACCATAAAGCAGCTAATGGAAGGCCCCCCTAATGACAA
                      ____________________________________________________________
consensus             TTTCTGCCCCCAAGATCTGGAAACCATAAAGCAGCTAATGGAAGGCCCCCCTAATGACAA
 
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rJMSF016H03+          TCAGGAAAGACTAAGGCAACAGGGTGTTTATGAATCACTATACCGAGACATAATGGTTGG
rJMSF029G12+          TCAGGAAAGACTAAGGCAACAGGGTGTTTATGAATCACTATACCGAGACATAATGGTTGG
                      ____________________________________________________________
consensus             TCAGGAAAGACTAAGGCAACAGGGTGTTTATGAATCACTATACCGAGACATAATGGTTGG
 
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rJMSF016H03+          TTATGCAAAATGGGAATTCAGTCCATTGGATTTAATCAATCCATTTCCCAACAATGAGGG
rJMSF029G12+          TTATGCAAAATGGGAATTCAGTCCATTGGATTTAATCAATCCATTTCCCAACAATGAGGG
                      ____________________________________________________________
consensus             TTATGCAAAATGGGAATTCAGTCCATTGGATTTAATCAATCCATTTCCCAACAATGAGGG
 
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rJMSF016H03+          CTCTGTCCACATTTGGCAAGGTCAGGAAGATAAAATCATCCCGGCTGTAGCGAATCGCTA
rJMSF029G12+          CTCTGTCCACATTTGGCAAGGTCAGGAAGATAAAATCATCCCGGCTGTAGCGAATCGCTA
                      ____________________________________________________________
consensus             CTCTGTCCACATTTGGCAAGGTCAGGAAGATAAAATCATCCCGGCTGTAGCGAATCGCTA
 
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rJMSF016H03+          TATATCCGAGCAACTCCCCTGGATTCAGTACCACGAGGTTCCAGACGGAGGGCATTTGAT
rJMSF029G12+          TATATCCGAGCAACTCCCCTGGATTCAGTACCACGAGGTTCCAGACGGAGGGCATTTGAT
                      ____________________________________________________________
consensus             TATATCCGAGCAACTCCCCTGGATTCAGTACCACGAGGTTCCAGACGGAGGGCATTTGAT
 
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rJMSF016H03+          TATTTTCAACGCGAGTGTATGCGAAACCATCTTCAGGAAATTAGTAGGTGCATGAGATGG
rJMSF029G12+          TATTTTCAACGCGAGTGTATGCGAAACCATCTTCAGGAAATTAGTAGGTGCATGAGATGG
                      ____________________________________________________________
consensus             TATTTTCAACGCGAGTGTATGCGAAACCATCTTCAGGAAATTAGTAGGTGCATGAGATGG
 
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rJMSF016H03+          GTGTATAGCTGACATGTGAGGAATACAAAGTTGAAAATAAAGACCCCAGTGGGGATTGAG
rJMSF029G12+          GTGTATAGCTGACATGTGAGGAATACAAAGTTGAAAATAAAGACCCCAGTGGGGATTGAG
                      ____________________________________________________________
consensus             GTGTATAGCTGACATGTGAGGAATACAAAGTTGAAAATAAAGACCCCAGTGGGGATTGAG
 
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rJMSF016H03+          GATGAAAAGATTGACCTCAGTTGTAAAAGCTATGTACTCTGTTTACAAGTATTGTTATCT
rJMSF029G12+          GATGAAAAGATTGACCTCAGTTGTAAAAGCTATGTACTCTGTTTACAAGTATTGTTATCT
                      ____________________________________________________________
consensus             GATGAAAAGATTGACCTCAGTTGTAAAAGCTATGTACTCTGTTTACAAGTATTGTTATCT
 
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rJMSF016H03+          AATGTTAATGCTGGTATTGGTGAATACATTAAAATGAACAAGTTCATGTAATG       
rJMSF029G12+          AATGTTAATGCTGGTATTGGTGAATACATTAAAATGAACAAGTTCATGTAATGGAAGGGC
                      ____________________________________________________________
consensus             AATGTTAATGCTGGTATTGGTGAATACATTAAAATGAACAAGTTCATGTAATGGAAGGGC