Contig 011340:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014G06Sequence209011340 (3)
JMSF028H01Sequence658006562 (7)gb|EYU37791.1|1e-99hypothetical protein MIMGU_mgv1a008244mg [Erythranthe guttata]210011340 (3)
JMSF039J23Sequence681006562 (7)emb|CDO97059.1|6e-122unnamed protein product [Coffea canephora]178011340 (3)

Alignment

This contig is upended


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rJMSF014G06+                                       GNAAGGGGNNNNTTTTTTNTTNCNAAAANNN
                      ____________________________________________________________
consensus                                          GNAAGGGGNNNNTTTTTTNTTNCNAAAANNN
 
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rJMSF014G06+          GGGGGGNAAAAAAAAAAAAACCACTTTGCCCTTGGACATTTGATTTTCATAATAGGAAAA
rJMSF039J23+                  AAAAAAAAAAAACCACTTTGCCCTTGGACATTTGATTTTCATAATAGGAAAA
rJMSF028H01+                  AAAAAAAAAAAACCACTTTGCCCTTGGACATTTGATTTTCATAATAGGAAAA
                      ____________________________________________________________
consensus             GGGGGGNAAAAAAAAAAAAACCACTTTGCCCTTGGACATTTGATTTTCATAATAGGAAAA
 
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rJMSF014G06+          ACTATTATGGTTTTTTGTAAGGTTTGTGCTAGATTTGTTCTGCAATAATAGGTTATAGTG
rJMSF039J23+          ACTATTATGGTTTTTTGTAAGGTTTGTGCTAGATTTGTTCTGCAATAATAGGTTATAGTG
rJMSF028H01+          ACTATTATGGTTTTTTGTAAGGTTTGTGCTAGATTTGTTCTGCAATAATAGGTTATAGTG
                      ____________________________________________________________
consensus             ACTATTATGGTTTTTTGTAAGGTTTGTGCTAGATTTGTTCTGCAATAATAGGTTATAGTG
 
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rJMSF014G06+          TTGTGCCCAAATTTGGAGTATTGAAGAAAGCCTTTCCCATGTAAAACGTT          
rJMSF039J23+          TTGTGCCCAAATTTGGAGTATTGAAGAAAGCCTTTCCCATGTAAAACGTT          
rJMSF028H01+          TTGTGCCCAAATTTGGAGTATTGAAGAAAGCCTTTCCCATGTAAAACGTTTATTGAAGTT
                      ____________________________________________________________
consensus             TTGTGCCCAAATTTGGAGTATTGAAGAAAGCCTTTCCCATGTAAAACGTTTATTGAAGTT