| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF007F05 | Sequence | 406 | 002280 (3) | ref|XP_009588653.1| | 5e-29 | PREDICTED: probable inactive purple acid phosphatase 27 isoform X1 [Nicotiana t | 744 | 011339 (3) | ref|XP_009588654.1| | 3e-112 | PREDICTED: nucleotide pyrophosphatase/phosphodiesterase-like isoform X2 [Nicoti |
| JMSF027J13 | Sequence | 670 | 002280 (3) | ref|XP_009588653.1| | 2e-71 | PREDICTED: probable inactive purple acid phosphatase 27 isoform X1 [Nicotiana t | 782 | 011339 (3) | ref|XP_009588654.1| | 2e-119 | PREDICTED: nucleotide pyrophosphatase/phosphodiesterase-like isoform X2 [Nicoti |
| JMSF031D23 | Sequence | 635 | 002280 (3) | ref|XP_009777408.1| | 6e-64 | PREDICTED: probable inactive purple acid phosphatase 27 isoform X1 [Nicotiana s | 584 | 011339 (3) | ref|XP_004242806.1| | 2e-70 | PREDICTED: probable inactive purple acid phosphatase 27 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF027J13+ TA
____________________________________________________________
consensus TA
. : . : . : . : . : . :
rJMSF007F05+ AGCGGACACGGAACACGACTGGAGAAT
rJMSF027J13+ TCAAACGGAGTATGGGCTGTTCCACTTCTGCATAGCGGACACGGAACACGACTGGAGAAT
____________________________________________________________
consensus TCAAACGGAGTATGGGCTGTTCCACTTCTGCATAGCGGACACGGAACACGACTGGAGAAT
. : . : . : . : . : . :
rJMSF007F05+ TGGGTCAGAGCAGTACAAATTCATTGAGAAGTGCCTGGCNTCGGCCAACCGCCACAAGAC
rJMSF027J13+ TGGGTCAGAGCAGTACAAATTCATTGAGAAGTGCCTGGCCTCGGCCAACCGCCACAAGAC
____________________________________________________________
consensus TGGGTCAGAGCAGTACAAATTCATTGAGAAGTGCCTGGCCTCGGCCAACCGCCACAAGAC
. : . : . : . : . : . :
rJMSF007F05+ TCCATGGCTCATCTTCGCTGCCCACCGCGTGCTTGGCTACTCCTCTAACGACTGGTACGC
rJMSF027J13+ TCCATGGCTCATCTTCGCTGCCCACCGCGTGCTTGGCTACTCCTCTAACGACTGGTACGC
____________________________________________________________
consensus TCCATGGCTCATCTTCGCTGCCCACCGCGTGCTTGGCTACTCCTCTAACGACTGGTACGC
. : . : . : . : . : . :
rJMSF007F05+ CAAAGAAGGGTCGTTCGAGGAGCCCATGGGGAGGGAGCATTTGCAGGGGTTGTGGCAAAA
rJMSF031D23+ CGAGGAGCCCATGGGGAGGGAGCATTNGCAGGGGTTGTGGCAAAA
rJMSF027J13+ CAAAGAAGGGTCGTTCGAGGAGCCCATGGGGAGGGAGCATTTGCAGGGGTTGTGGCAAAA
____________________________________________________________
consensus CAAAGAAGGGTCGTTCGAGGAGCCCATGGGGAGGGAGCATTTGCAGGGGTTGTGGCAAAA
. : . : . : . : . : . :
rJMSF007F05+ GTACAAAGTTGACATGGCTTTCTACGGCCACGTCCACAACTATGAGCGCACCTGCCCCAT
rJMSF031D23+ GTACAAAGTTGACATGGCTTTCTACGGCCACGTCCACANCTATGAGCGCACCTGCCCCAT
rJMSF027J13+ GTACAAAGTTGACATGGCTTTCTACGGCCACGTCCACAACTATGAGCGCACCTGCCCCAT
____________________________________________________________
consensus GTACAAAGTTGACATGGCTTTCTACGGCCACGTCCACAACTATGAGCGCACCTGCCCCAT
. : . : . : . : . : . :
rJMSF007F05+ CTACCAGAACCAGTGCGTCAACGACGAAACCTCCAACTACTCCGGCACCGTCAACGGGAC
rJMSF031D23+ CTACCAGAACCAGTGCGTCAACGACGAAACCTCCAACTACTCCGGCACCGTCAACGGGAC
rJMSF027J13+ CTACCAGAACCAGTGCGTCAACGACGAAACCTCCAACTACTCCGGCACCGTCAACGGGAC
____________________________________________________________
consensus CTACCAGAACCAGTGCGTCAACGACGAAACCTCCAACTACTCCGGCACCGTCAACGGGAC
. : . : . : . : . : . :
rJMSF007F05+ CATCCACGTCGTGGTCGGGGGCGGAGGGAGCCATCTCTCACAATTCACCTCCATCAACAC
rJMSF031D23+ CATCCACGTCGTGGTCGGGGGCGGAGGGAGCCATCTCTCACAATTCACCTCCATCAACAC
rJMSF027J13+ CATCCACGTCGTGGTCGGGGGCGGAGGGAGCCATCTCTCACAATTCACCTCCATCAACAC
____________________________________________________________
consensus CATCCACGTCGTGGTCGGGGGCGGAGGGAGCCATCTCTCACAATTCACCTCCATCAACAC
. : . : . : . : . : . :
rJMSF007F05+ CACTTGGAGCCTGTACAAGGATTATGATTGGGGATTCGTCAAGCTCACCGCGTTTAATCA
rJMSF031D23+ CACTTGGAGCCTGTACAAGGATTATGATTGGGGATTCGTCAAGCTCACCGCGTTTAATCA
rJMSF027J13+ CACTTGGAGCCTGTACAAGGATTATGATTGGGGATTCGTCAAGCTCACCGCGTTTAATCA
____________________________________________________________
consensus CACTTGGAGCCTGTACAAGGATTATGATTGGGGATTCGTCAAGCTCACCGCGTTTAATCA
. : . : . : . : . : . :
rJMSF007F05+ ATCGTCTCTGCTCTTCGAATACAAGAAGAGTAGAGATGGCAAAGTGTATGATTCTTTCAC
rJMSF031D23+ ATCGTCTCTGCTCTTCGAATACAAGAAGAGTAGAGATGGCAAAGTGTATGATTCTTTCAC
rJMSF027J13+ ATCGTCTCTGCTCTTCGAATACAAGAAGAGTAGAGATGGCAAAGTGTATGATTCTTTCAC
____________________________________________________________
consensus ATCGTCTCTGCTCTTCGAATACAAGAAGAGTAGAGATGGCAAAGTGTATGATTCTTTCAC
. : . : . : . : . : . :
rJMSF007F05+ CATCTCAAGGGATTATAGAGATGTATTGGCCTGCGTCCATGATGGGTGTGAGCCAACCAC
rJMSF031D23+ CATCTCAAGGGATTATAGAGATGTATTGGCCTGCGTCCATGATGGGTGTGAGCCAACCAC
rJMSF027J13+ CATCTCAAGGGATTATAGAGATGTATTGGCCTGCGTCCATGATGGGTGTGAGCCAACCAC
____________________________________________________________
consensus CATCTCAAGGGATTATAGAGATGTATTGGCCTGCGTCCATGATGGGTGTGAGCCAACCAC
. : . : . : . : . : . :
rJMSF007F05+ TCT
rJMSF031D23+ TCT
rJMSF027J13+ TCTCGCAAACTAGATCGATACAAGATATGAACAAAATTGGCTGGTGATCAGGTGCAAACA
____________________________________________________________
consensus TCTCGCAAACTAGATCGATACAAGATATGAACAAAATTGGCTGGTGATCAGGTGCAAACA
. : . : . : . : . : . :
rJMSF027J13+ TTGTTGCCTCTTGCTTAGGGTTAAAATAATGTTTAAGGTGAAAATAACAAATTGGGTTTT
____________________________________________________________
consensus TTGTTGCCTCTTGCTTAGGGTTAAAATAATGTTTAAGGTGAAAATAACAAATTGGGTTTT
. : . : . : . : . : . :
rJMSF027J13+ GACAAAATAGGCTTGTTACGAGAATCAAGCTCCCAGTGCTCTAAATTAGATCGGGTCATG
____________________________________________________________
consensus GACAAAATAGGCTTGTTACGAGAATCAAGCTCCCAGTGCTCTAAATTAGATCGGGTCATG