clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF006M16 | Sequence | 563 | 011862 (18) | ref|XP_009787672.1| | 1e-17 | PREDICTED: BEL1-like homeodomain protein 1 [Nicotiana sylvestris] ref|XP_0097876 | 785 | 011328 (8) | emb|CDP10596.1| | 2e-47 | unnamed protein product [Coffea canephora] |
JMFF023B23 | Sequence | 522 | 011862 (18) | ref|XP_009787672.1| | 5e-24 | PREDICTED: BEL1-like homeodomain protein 1 [Nicotiana sylvestris] ref|XP_0097876 | 577 | 011328 (8) | emb|CDP10596.1| | 7e-31 | unnamed protein product [Coffea canephora] |
JMFF029N01 | Sequence | 485 | 011862 (18) | ref|XP_009787672.1| | 1e-17 | PREDICTED: BEL1-like homeodomain protein 1 [Nicotiana sylvestris] ref|XP_0097876 | 731 | 011328 (8) | emb|CDP10596.1| | 3e-46 | unnamed protein product [Coffea canephora] |
JMFF046H19 | Sequence | 573 | 011862 (18) | ref|XP_009787672.1| | 5e-24 | PREDICTED: BEL1-like homeodomain protein 1 [Nicotiana sylvestris] ref|XP_0097876 | 334 | 011328 (8) | |||
JMFN006K10 | Sequence | 627 | 011328 (8) | ref|XP_009787672.1| | 5e-50 | PREDICTED: BEL1-like homeodomain protein 1 [Nicotiana sylvestris] ref|XP_0097876 | |||||
JMFS037E01 | Sequence | 596 | 011328 (8) | ref|XP_009787672.1| | 1e-21 | PREDICTED: BEL1-like homeodomain protein 1 [Nicotiana sylvestris] ref|XP_0097876 | |||||
JMSF024I18 | Sequence | 648 | 011862 (18) | ref|XP_009787672.1| | 1e-26 | PREDICTED: BEL1-like homeodomain protein 1 [Nicotiana sylvestris] ref|XP_0097876 | 785 | 011328 (8) | ref|XP_009787672.1| | 2e-44 | PREDICTED: BEL1-like homeodomain protein 1 [Nicotiana sylvestris] ref|XP_0097876 |
JMSF045I20 | Sequence | 646 | 011862 (18) | ref|XP_009787672.1| | 8e-26 | PREDICTED: BEL1-like homeodomain protein 1 [Nicotiana sylvestris] ref|XP_0097876 | 758 | 011328 (8) | ref|XP_009787672.1| | 2e-45 | PREDICTED: BEL1-like homeodomain protein 1 [Nicotiana sylvestris] ref|XP_0097876 |
This contig is upended
. : . : . : . : . : . :
JMFN006K10- CAGGTTTCAACCTCATTGGACCCTCATAAATGGAAAGCATTACTCAGGGAAGTCCAAA
rJMFF029N01+ TCAGAAATGGAAAGCATTANTCAGGGAAGTCCAAA
rJMSF045I20+ CCAAA
rJMFF006M16+ CCAAA
rJMSF024I18+ TCCAAN
____________________________________________________________
consensus CAGGTTTCAACCTCATTGGACCCTCATAAATGGAAAGCATTACTCAGGGAAGTCCAAA
. : . : . : . : . : . :
JMFN006K10- GAAGCCGCGGGGGGGCTCAGACATGCCCGCTCTCATGAAATTTGGCAACGACAGGCAAAA
rJMFF029N01+ GAAGCCGCGGGGGGGNTCAGACATGCCCGNTNTCATGAAATTTGGCAACGACAGGCAAAA
rJMSF045I20+ GAAGCCGCGGGGGGGCTCAGACATGCCCGCTCTCATGAAATTTGGCAACGACAGGCAAAA
rJMFF006M16+ GAAGCCGCGGGGGGGCTCAGACATGCCCGCTTTCATGAAATTTGGCAACGACAGGCAAAA
rJMSF024I18+ GAAGCCGCGGGGGGGNTCAGACATGCCCGCTCTCATGAAATTTGGCAACGACAGGCCAAA
____________________________________________________________
consensus GAAGCCGCGGGGGGGCTCAGACATGCCCGCTCTCATGAAATTTGGCAACGACAGGCAAAA
. : . : . : . : . : . :
JMFN006K10- CCGAGAAGGATTCCCCTTGGTGGAGGGATCAACAAACTTCATGGCCGCCTTCGGCTCCTA
rJMFF023B23+ TCCTA
rJMFF029N01+ CCGAGAAGGATTCCCCTTGGTGGAGGGATCAACAAACTTCATGGCCGCCTTCGGCTCCTA
rJMSF045I20+ CCGAGAAGGATTCCCCTTGGTGGAGGGATCAACAAACTTCATGGCCGCCTTCGGCTCCTA
rJMFF006M16+ CCGAGAAGGATTCCCCTTGGTGGAGGGATCAACAAACTTCATGGCCGCCTTCGGCTCCTA
rJMSF024I18+ CCGAGAAGGATTCCCCTTGGTGGAGGGATCAACAAACTTCATGGCCGCCTTCGGCTCCTA
____________________________________________________________
consensus CCGAGAAGGATTCCCCTTGGTGGAGGGATCAACAAACTTCATGGCCGCCTTCGGCTCCTA
. : . : . : . : . : . :
JMFN006K10- CCCAATGGAGCAAATGGGGCGGTTCACCACCGAGCAATTCCCCCCGCCTTATTCCACCAA
rJMFF023B23+ CCCAATGGAGCAAATGGGGCGGTTCACCACCGAGCAATTCCCCCCGCCTTATTCCACCAA
rJMFF029N01+ CCCAATGGAGCAAATGGGGCGGTTCACCACCGAGCAATTCCCCCCGCCTTATTCCACCAA
rJMSF045I20+ CCCAATGGAGCAAATGGGGCGGTTCACCACCGAGCAATTCCCCCCGCCTTATTCCACCAA
JMFS037E01+ CGGTTCACCACCGAGCAATTCCCGCCGCCTT-TTCCACCAA
rJMFF006M16+ CCCAATGGAGCAAATGGGGCGGTTCACCACCGAGCAATTCCCCCCGCCTTATTCCACCAA
rJMSF024I18+ CCCAATGGAGCAAATGGGGCGGTTCACCACCGAGCAATTCCCCCCGCCTTATTCCACCAA
____________________________________________________________
consensus CCCAATGGAGCAAATGGGGCGGTTCACCACCGAGCAATTCCCCCCGCCTTATTCCACCAA
. : . : . : . : . : . :
JMFN006K10- CGCTGTCTCCCTAACCCTCGGCCTGCAGCACAGCGAAAACCTCTCCGCCGCCATGTCTGC
rJMFF023B23+ CGCTGTNTCCCTAACCCTCGGCCTGCAGCACAGCGAAAACCTNTCCGCCGCCATGTTTGC
rJMFF029N01+ CGCTGTCTCCCTAACCCTCGGCCTGCAGCACAGNGAAAACCTNTCCGCCGCCATGTTTGC
rJMSF045I20+ CGCTGTCTCCCTAACCCTCGGCCTGCAGCACAGCGAAAACCTCTCCGCCGCCATGTCTGC
JMFS037E01+ CGCTGTCTCCCTAACCCTCGGCCTGCAGCACAGCGAAAACCTCTCCGCCGCCATGTATGC
rJMFF006M16+ CGCTGTCTCCCTAACCCTCGGCCTGCAGCACAGCGAAAACCTCTCCGCCGCCATGTCTGC
rJMSF024I18+ CGCTGTCTCCCTAACCCTCGGCCTGCAGCACAGCGAAAACCTCTCCGCCGCCATGTCTGC
____________________________________________________________
consensus CGCTGTCTCCCTAACCCTCGGCCTGCAGCACAGCGAAAACCTCTCCGCCGCCATGTCTGC
. : . : . : . : . : . :
JMFN006K10- CACACACCACAATTTCCTCCCCAATCAAATGGGAAGGGGAGTCGTGATTGGTGAAGCCGA
rJMFF023B23+ CACACACCACAATTTCCTCCCCAATCAAATGGGAAGGGGAGTNGTGATTGGTGAAGCCGA
rJMFF029N01+ CACACACCACAATTTCCTCCCCAATCAAATGGGAAGGGGAGTCGTGATTGGTGAAGCCGA
rJMSF045I20+ CACACACCACAATTTCCTCCCCAATCAAATGGGAAGGGGAGTCGTGATTGGTGAAGCCGA
JMFS037E01+ CACACACCACAATTTCCTCCCCAATCAAATGGGAAGGGGAGTCGTGATTGGTGAAGCCGA
rJMFF006M16+ CACACACCACAATTTCCTCCCCAATCAAATGGGAAGGGGAGTCGTGATTGGTGAAGCCGA
rJMSF024I18+ CACACACCACAATTTCCTCCCCAATCAAATGGGAAGGGGAGTCGTGATTGGTGAAGCCGA
____________________________________________________________
consensus CACACACCACAATTTCCTCCCCAATCAAATGGGAAGGGGAGTCGTGATTGGTGAAGCCGA
. : . : . : . : . : . :
JMFN006K10- AGCAAATGATTTCGTCGCTGGAATGACCACTCCGACATCTGCTCACCCCACCAGCGTGTT
rJMFF023B23+ AGCAAATGATTTNGTCGCTGGAATGACCACTCCGACATNTGCTCACCCCACCAGCGTGTT
rJMFF029N01+ AGCAAATGATTTCGTCGCTGGAATGACCACTCCGACATNTGCTCACCCCACCAGCGTGTT
rJMSF045I20+ AGCAAATGATTTCGTCGCTGGAATGACCACTCCGACATCTGCTCACCCCACCAGCGTGTT
JMFS037E01+ AGCAAATGATTTCGTCGCTGGAATGACCACTCCGACATGTGCTCACCCCACCAGCGTGTT
rJMFF006M16+ AGCAAATGATTTCGTCGCTGGAATGACCACTCCGACATCTGCTCACCCCACCAGCGTGTT
rJMSF024I18+ AGCAAATGATTTCGTCGCTGGAATGACCACTCCGACATCTGCTCACCCCACCAGCGTGTT
____________________________________________________________
consensus AGCAAATGATTTCGTCGCTGGAATGACCACTCCGACATCTGCTCACCCCACCAGCGTGTT
. : . : . : . : . : . :
JMFN006K10- CGACAACTTCAACATCCAAAACCGCAAGAGGTTCCCTGCACAATTGTTGCCAGACTTTGT
rJMFF023B23+ NGACAACTTCAACATCCAAAACCGCAAGAGGTTCCCTGCACAATTGTTGCCAGACTTTGT
rJMFF029N01+ CGACAACTTCAACATCCAAAACCGCAAGAGGTTCCCTGCACAATTGTTGCCAGACTTTGT
rJMSF045I20+ CGACAACTTCAACATCCAAAACCGCAAGAGGTTCCCTGCACAATTGTTGCCAGACTTTGT
JMFS037E01+ CGACAACTTCAACATCCAAAACCGCAAGAGGTTCCCTGCACAATTGTTGCCAGACTTTGT
rJMFF006M16+ CGACAACTTCAACATCCAAAACCGCAAGAGGTTCCCTGCACAATTGTTGCCAGACTTTGT
rJMFF046H19+ AACATCCAAAACCGCAAGAGGTTCCCTGCACAATTGTTGCCAGACTTTGT
rJMSF024I18+ CGACAACTTCAACATCCAAAACCGCAAGAGGTTCCCTGCACAATTGTTGCCAGACTTTGT
____________________________________________________________
consensus CGACAACTTCAACATCCAAAACCGCAAGAGGTTCCCTGCACAATTGTTGCCAGACTTTGT
. : . : . : . : . : . :
JMFN006K10- CACCTGATCGAGTTTAAGGTTGTCTGCAGGGTCCTCCTCTTTGTCTGATCTTCATCACTA
rJMFF023B23+ CACCTGATNGAGTTTAAGGTTGTNTGCAGGGTCCTCCTNTTTGTNTGATNTTCATCACTA
rJMFF029N01+ CACCTGATCGAGTTTAAGGTTGTNTGCAGGGTCCTCCTCTTTGTNTGATCTTCATCACTA
rJMSF045I20+ CACCTGATCGAGTTTAAGGTTGTCTGCAGGGTCCTCCTCTTTGTCTGATCTTCATCACTA
JMFS037E01+ CACCTGATCGAGTTTAAGGTTGTCTGCAGGGTCCTCCTCTTTGTCTGATCTTCATCACTA
rJMFF006M16+ CACCTGATCGAGTTTAAGGTTGTCTGCAGGGTCCTCCTCTTTGTCTGATCTTCATCACTA
rJMFF046H19+ CCCCTGATTGAGTTTAAGGTTGTTTGCAGGGTCCTCCTCTTTGTTTGATTTTCATCACTA
rJMSF024I18+ CACCTGATCGAGTTTAAGGTTGTCTGCAGGGTCCTCCTCTTTGTCTGATCTTCATCACTA
____________________________________________________________
consensus CACCTGATCGAGTTTAAGGTTGTCTGCAGGGTCCTCCTCTTTGTCTGATCTTCATCACTA
. : . : . : . : . : . :
JMFN006K10- TTTTCTTCCATTTCCCAAAACTATTAGGAAGAACGACATTTCATTATGGTTAGTGCAAAC
rJMFF023B23+ TTTTNTTCCATTTCCCAAAACTATTAGGAAGAACGACATTTCATTATGGTTAGTGCAAAC
rJMFF029N01+ TTTTNTTCCATTTCCCAAAACTATTAGGAAGAACGACATTTCATTATGGTTAGTGCAAAC
rJMSF045I20+ TTTTCTTCCATTTCCCAAAACTATTAGGAAGAACGACATTTCATTATGGTTAGTGCAAAC
JMFS037E01+ TTTTCTTCCATTTCCCAAAACTATTAGGAAGAACGACATTTCATTATGGTTAGTGCAAAC
rJMFF006M16+ TTTTCTTCCATTTCCCAAAACTATTAGGAAGAACGACATTTCATTATGGTTAGTGCAAAC
rJMFF046H19+ TTTTTTTCCATTTCCCAAAACTTTTTGGAAGAACGGCATTTCATTATGGTTAGTGCAAAC
rJMSF024I18+ TTTTCTTCCATTTCCCAAAACTATTAGGAAGAACGACATTTCATTATGGTTAGTGCAAAC
____________________________________________________________
consensus TTTTCTTCCATTTCCCAAAACTATTAGGAAGAACGACATTTCATTATGGTTAGTGCAAAC
. : . : . : . : . : . :
JMFN006K10- AACCTTGAAAAACAAAAAAAAATTAAAAG
rJMFF023B23+ AACCTTGAAAAACAAAAAAAAAATTAAAAGCTTTTACATAGTACAGGTCTACACTTTGCA
rJMFF029N01+ AACCTTGAAAAACAAAAAAAAAATTAAAAGCTTTTACATAGTACAGGTCTACACTTTGCA
rJMSF045I20+ AACCTTGAAAAAC-AAAAAAAAATTAAAAGCTTTTACATAGTACAGGTCTACACTTTGCA
JMFS037E01+ AACCTTGAAAAAC-AAAAAAAAATTAAAAGCTTTTACATAGTACAGGTCTACACTTTGCA
rJMFF006M16+ AACCTTGAAAAAC-AAAAAAAAATTAAAAGCTTTTACATAGTACAGGTCTACACTTTGCA
rJMFF046H19+ AACCTTGAAAAACAAAAAAAAAATTAAAAGCTTTTTCATAGTTCAGGTTTTCCCTTTGCA
rJMSF024I18+ AACCTTGAAAAAC-AAAAAAAAATTAAAAGCTTTTACATAGTACAGGTCTACACTTTGCA
____________________________________________________________
consensus AACCTTGAAAAACAAAAAAAAAATTAAAAGCTTTTACATAGTACAGGTCTACACTTTGCA
. : . : . : . : . : . :
rJMFF023B23+ GAAGAACCACTAGAGTTCTTATGGATAGTTTAGGCTTTTAGAAGATGTGGTTGAGGATTG
rJMFF029N01+ GAAGAACCACTAGAGTTCTTATGGATAGTTTAGGCTTTTAGAAGATGTGGTTGAGGATTG
rJMSF045I20+ GAAGAACCACTAGAGTTCTTATGGATAGTTTAGGCTTTTAGAAGATGTGGTTGAGGATTG
JMFS037E01+ GAAGAACCACTAGAGTTCTTATGGATAGTTTAGGCTTTTAGAAGATGTGGTTGAGGATTG
rJMFF006M16+ GAAGAACCACTAGAGTTCTTATGGATAGTTTAGGCTTTTAGAAGATGTGGTTGAGGATTG
rJMFF046H19+ GAAGAACCCCTAGAGTTTTTATGGATAGTTTAGGCTTTTAGAAGAAGTGGTTGAGGATTG
rJMSF024I18+ GAAGAACCACTAGAGTTCTTATGGATAGTTTAGGCTTTTAGAAGATGTGGTTGAGGATTG
____________________________________________________________
consensus GAAGAACCACTAGAGTTCTTATGGATAGTTTAGGCTTTTAGAAGATGTGGTTGAGGATTG
. : . : . : . : . : . :
rJMFF023B23+ TATATTAATTTTGTTGTTGCAGATAAGATAAT
rJMFF029N01+ TATATTAATTTTGTTGTTGCAGATAAGATAATT
rJMSF045I20+ TATATTAATTTTGTTGTTGCAGATAAGATAATTGGATTGTTATATTGGA
JMFS037E01+ TATATTAATTTTGTTGTTGCAGATAAGATAATTGGATTGTTATATTGGA
rJMFF006M16+ TATATTAATTTTGTTGTTGCAGATAAGATAATTGGATTGTTATATTGGATGTGGAAAAAC
rJMFF046H19+ TATATTAATTTTGTTGTTGCAGATAAGATAATTGGATTGTTATA
rJMSF024I18+ TATATTAATTTTGTTGTTGCAGATAAGATAATTGGATTGTTATATTGGATGTGGAAAAAC
____________________________________________________________
consensus TATATTAATTTTGTTGTTGCAGATAAGATAATTGGATTGTTATATTGGATGTGGAAAAAC
. : . : . : . : . : . :
rJMFF006M16+ ACATAATTTGGGATGGTATAGAAGAAGATAA
rJMSF024I18+ ACATAATTTGGGATGGTATAGAAGAAGATAATGTTAAGTTTCATTGCTATCAGAACAATT
____________________________________________________________
consensus ACATAATTTGGGATGGTATAGAAGAAGATAATGTTAAGTTTCATTGCTATCAGAACAATT