Contig 011326:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024D11Sequence613011326 (2)733011326 (2)emb|CDP21605.1|2e-12unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF024D11-                           GAGAAAGTTAATATCCCATCTGGGTTTTCTTCATCTTCTTCTCC
                      ____________________________________________________________
consensus                             GAGAAAGTTAATATCCCATCTGGGTTTTCTTCATCTTCTTCTCC
 
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JMSF024D11-           TTCTCCCTCCTCTTCTTCTCTCCATTTACAGAAAGATAATTGTTTTATTCTTGTAAATCT
                      ____________________________________________________________
consensus             TTCTCCCTCCTCTTCTTCTCTCCATTTACAGAAAGATAATTGTTTTATTCTTGTAAATCT
 
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JMSF024D11-           ATCTCTTTATCCTTGTTTATATTTCTGAAAATAGATTTTTTTTATATATATAAATTTACA
                      ____________________________________________________________
consensus             ATCTCTTTATCCTTGTTTATATTTCTGAAAATAGATTTTTTTTATATATATAAATTTACA
 
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JMSF024D11-           GCTTAGCTTGTTGATTGAGATCACTGCCTTTGTTAGATTATGGAAGCTGTTATGTACCGT
                      ____________________________________________________________
consensus             GCTTAGCTTGTTGATTGAGATCACTGCCTTTGTTAGATTATGGAAGCTGTTATGTACCGT
 
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JMSF024D11-           TCATCTTCAGATCAACAAATCTCACCTAACAAAAACTACTTTAGAAGCTCGATGAAGATG
                      ____________________________________________________________
consensus             TCATCTTCAGATCAACAAATCTCACCTAACAAAAACTACTTTAGAAGCTCGATGAAGATG
 
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JMSF024D11-           ATGAATCGAGCATCTTTGATTCCTAGGTTTTCTGAGGATTTTGTTCCTGCGGCATATTTG
                      ____________________________________________________________
consensus             ATGAATCGAGCATCTTTGATTCCTAGGTTTTCTGAGGATTTTGTTCCTGCGGCATATTTG
 
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JMSF024D11-           CAGGCGGGGCTTTTACAGGCTCCTGTTCATCCTCCTCCTCCTCCATTTCTGTCTCAATCT
rJMSF024D11+                                                         TCTGTCTCAATCN
                      ____________________________________________________________
consensus             CAGGCGGGGCTTTTACAGGCTCCTGTTCATCCTCCTCCTCCTCCATTTCTGTCTCAATCT
 
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JMSF024D11-           TTTCCTGTTTTTTCAGTTCACCAGCAACAGCCGCCTCTTCTTCCTCTCCCCATCTCCAAT
rJMSF024D11+          TTTCCTGTTTTTTCAGTTCACCAGCAACAGCCGCCTCTTCTTCCTCTCCCCATCTCCAAT
                      ____________________________________________________________
consensus             TTTCCTGTTTTTTCAGTTCACCAGCAACAGCCGCCTCTTCTTCCTCTCCCCATCTCCAAT
 
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JMSF024D11-           GGCGGATATAGCATGAATTTCAGTCAAAGTAGGACACTTTCTTGCCCTCCCAACTATGGG
rJMSF024D11+          GGCGGATATAGCATGAATTTCAGTCAAAGTAGGACACTTTCTTGCCCTCCCAACTATGGG
                      ____________________________________________________________
consensus             GGCGGATATAGCATGAATTTCAGTCAAAGTAGGACACTTTCTTGCCCTCCCAACTATGGG
 
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JMSF024D11-           AGACCCAATAATAACAGCAAGAACAGAAGCAGAGATCCCTCTCTGACGCCCAAGAAATCC
rJMSF024D11+          AGACCCAATAATAACAGCAAGAACAGAAGCAGAGATCCCTCTCTGACGCCCAAGAAATCC
                      ____________________________________________________________
consensus             AGACCCAATAATAACAGCAAGAACAGAAGCAGAGATCCCTCTCTGACGCCCAAGAAATCC
 
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JMSF024D11-           AAGCAGAAGATCTCCAAGTCTCCCAAGAA                               
rJMSF024D11+          AAGCAGAAGATCTCCAAGTCTCCCAAGAAAGAAGACTTTGAGAAGAAGATGAAATCTGCA
                      ____________________________________________________________
consensus             AAGCAGAAGATCTCCAAGTCTCCCAAGAAAGAAGACTTTGAGAAGAAGATGAAATCTGCA
 
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rJMSF024D11+          AAAGAAGTTGTTGCCCCTTTGGGTCCAGACCCAGAACATCTTCCTAAACATGTTGTTGTC
                      ____________________________________________________________
consensus             AAAGAAGTTGTTGCCCCTTTGGGTCCAGACCCAGAACATCTTCCTAAACATGTTGTTGTC
 
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rJMSF024D11+          CCCAAGGTCTTATCTTTTTCATCGACAGAGAAAGATGATGATGAGGGGGACAAGTTTTCA
                      ____________________________________________________________
consensus             CCCAAGGTCTTATCTTTTTCATCGACAGAGAAAGATGATGATGAGGGGGACAAGTTTTCA
 
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rJMSF024D11+          GGATCTGTAGTGTTCACACTTTCACCTCCGCCTAGCAGCCTGCCTTTGCCCACTTTTTCA
                      ____________________________________________________________
consensus             GGATCTGTAGTGTTCACACTTTCACCTCCGCCTAGCAGCCTGCCTTTGCCCACTTTTTCA
 
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rJMSF024D11+          TTGAGGCCGAAGCTGAGCTGCAAAGCAGAGGCCGCCGGAATAGACACCGGAGCGACTGAC
                      ____________________________________________________________
consensus             TTGAGGCCGAAGCTGAGCTGCAAAGCAGAGGCCGCCGGAATAGACACCGGAGCGACTGAC
 
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rJMSF024D11+          AATCTCTGCAGACTTCTTCGTCTCCGGTAATTAATAAGCACAAATAGATGAATGATAGAT
                      ____________________________________________________________
consensus             AATCTCTGCAGACTTCTTCGTCTCCGGTAATTAATAAGCACAAATAGATGAATGATAGAT
 
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rJMSF024D11+          GTGAAGAAGAAGCTAAGGAAGGAATTAATAAGTATTGGTGTTATTATGTTAAGGGTGATA
                      ____________________________________________________________
consensus             GTGAAGAAGAAGCTAAGGAAGGAATTAATAAGTATTGGTGTTATTATGTTAAGGGTGATA
 
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rJMSF024D11+          TTATTATAACTTTTTAATTTCGTGTTGGATAATTTTAGTTTAGTAAAAGTCACCACCAGT
                      ____________________________________________________________
consensus             TTATTATAACTTTTTAATTTCGTGTTGGATAATTTTAGTTTAGTAAAAGTCACCACCAGT
 
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rJMSF024D11+          GCTTGTTTTTCTAACTGGGGGGTGGACAGACAGACAGACATGTTTAAGGTTTACTCTCTT
                      ____________________________________________________________
consensus             GCTTGTTTTTCTAACTGGGGGGTGGACAGACAGACAGACATGTTTAAGGTTTACTCTCTT