| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002K08 | Sequence | 318 | 006524 (11) | ref|XP_011093662.1| | 9e-24 | PREDICTED: mitochondrial-processing peptidase subunit alpha-like [Sesamum indic | 754 | 011325 (10) | ref|XP_009597035.1| | 1e-84 | PREDICTED: mitochondrial-processing peptidase subunit alpha [Nicotiana tomentos |
| JMFF005J22 | Sequence | 565 | 006524 (11) | emb|CDP03229.1| | 6e-63 | unnamed protein product [Coffea canephora] | 735 | 011325 (10) | ref|XP_009757181.1| | 2e-102 | PREDICTED: mitochondrial-processing peptidase subunit alpha [Nicotiana sylvestr |
| JMFF011F21 | Sequence | 413 | 006524 (11) | emb|CDP03229.1| | 1e-38 | unnamed protein product [Coffea canephora] | 673 | 011325 (10) | gb|KDO55872.1| | 8e-57 | hypothetical protein CISIN_1g0104472mg, partial [Citrus sinensis] gb|KDO55873.1| |
| JMFF012D18 | Sequence | 611 | 006524 (11) | emb|CDP03229.1| | 3e-82 | unnamed protein product [Coffea canephora] | 759 | 011325 (10) | ref|XP_009757181.1| | 4e-75 | PREDICTED: mitochondrial-processing peptidase subunit alpha [Nicotiana sylvestr |
| JMFF017O07 | Sequence | 722 | 011325 (10) | ref|XP_009597035.1| | 2e-75 | PREDICTED: mitochondrial-processing peptidase subunit alpha [Nicotiana tomentos | |||||
| JMFF042B15 | Sequence | 649 | 006524 (11) | emb|CDP03229.1| | 2e-80 | unnamed protein product [Coffea canephora] | 571 | 011325 (10) | gb|KDO55872.1| | 9e-40 | hypothetical protein CISIN_1g0104472mg, partial [Citrus sinensis] gb|KDO55873.1| |
| JMFF043D10 | Sequence | 645 | 006524 (11) | emb|CDP03229.1| | 4e-81 | unnamed protein product [Coffea canephora] | 392 | 011325 (10) | |||
| JMSF007G12 | Sequence | 279 | 006524 (11) | 796 | 011325 (10) | ref|XP_009597035.1| | 3e-72 | PREDICTED: mitochondrial-processing peptidase subunit alpha [Nicotiana tomentos | |||
| JMSF023P17 | Sequence | 663 | 006524 (11) | emb|CDP03229.1| | 3e-82 | unnamed protein product [Coffea canephora] | 773 | 011325 (10) | ref|XP_009757181.1| | 1e-65 | PREDICTED: mitochondrial-processing peptidase subunit alpha [Nicotiana sylvestr |
| JMSF051D11 | Sequence | 662 | 006524 (11) | emb|CDP03229.1| | 8e-82 | unnamed protein product [Coffea canephora] | 707 | 011325 (10) | gb|KDO55872.1| | 6e-55 | hypothetical protein CISIN_1g0104472mg, partial [Citrus sinensis] gb|KDO55873.1| |
This contig is upended
. : . : . : . : . : . :
rJMFF005J22+ GGTAAC
____________________________________________________________
consensus GGTAAC
. : . : . : . : . : . :
rJMFF005J22+ TCATTTTGCCCTTGCTTTTGAACTTCCTGGTGGCTGGCATAAGGAAAAGGATGCAATGAC
____________________________________________________________
consensus TCATTTTGCCCTTGCTTTTGAACTTCCTGGTGGCTGGCATAAGGAAAAGGATGCAATGAC
. : . : . : . : . : . :
rJMFF005J22+ TTTGACTGTGCTTCAGATGCTTATGGGAGGGGGTGGTTCTTTCTCTGCTGGTGGTCCTGG
____________________________________________________________
consensus TTTGACTGTGCTTCAGATGCTTATGGGAGGGGGTGGTTCTTTCTCTGCTGGTGGTCCTGG
. : . : . : . : . : . :
rJMFF005J22+ AAAGGGAATGTATTCAAGGCTATATCTTCGTGTATTGAATGAGTATCCGCAAGTCCATGC
rJMFF017O07+ TGAATGAGTATCCGCAAGTCCATGC
rJMFF002K08+ AGGGAATGTATTCAAGGCTATATCTTCGTGTATTGAATGAGTATCCGCAAGTCCATGC
rJMFF012D18+ TGAATGAGTATCCGCAAGTCCATGC
rJMSF007G12+ TATCCGCAAGTCCATGC
____________________________________________________________
consensus AAAGGGAATGTATTCAAGGCTATATCTTCGTGTATTGAATGAGTATCCGCAAGTCCATGC
. : . : . : . : . : . :
rJMFF005J22+ GTTCTCTGCATTCAGCAGCATTTTCAATAGCACTGGGTTATTTGGAATTCAAGCAACTAC
rJMFF017O07+ GTTCTCTGCATTCAGCAGCATTTTCAATAGCACTGGGTTATTTGGAATTCAAGCAACTAC
rJMFF002K08+ GTTCTCTGCATTCAGCAGCATTTTCAATAGCACTGGGTTATTTGGAATTCAAGCAACTAC
rJMFF012D18+ GTTCTNTGCATTCAGCAGCATTTTCAATAGCACTGGGTTATTTGGAATTCAAGCAACTAC
rJMSF007G12+ GNTCTNTGCATTCAGCAGCATTTTCAATAGCACTGGGTTATTTGGAATTCAAGCAACTAC
rJMSF023P17+ TTTCAATAGCACTGGGTTATTTGGAATTCAAGCAACTAC
____________________________________________________________
consensus GTTCTCTGCATTCAGCAGCATTTTCAATAGCACTGGGTTATTTGGAATTCAAGCAACTAC
. : . : . : . : . : . :
rJMFF005J22+ TTCTTCTGATTTTTCATCAAAAGCTGTTGATATCGCTGTTAAAGAGCTCACTGCCATTGC
rJMFF017O07+ TTCTTCTGATTTTTCATCAAAAGCTGTTGATATCGCTGTTAAAGAGCTCACTGCCATTGC
rJMFF002K08+ TTCTTCTGATTTTTCATCAAAAGCTGTTGATATCGCTGTTAAAGAGCTCACTGCCATTGC
rJMFF012D18+ TTCTTCTGATTTTTCATCAAAAGCTGTTGATATCGCTGTTAAAGAGCTCACTGCCATTGC
rJMFF011F21+ TGATTTTTCATCAAAAGCTGTTGATATCGCTGTTAAAGAGCTCACTGCCATTGC
rJMSF007G12+ TTCTTCTGATTTTTCATCAAAAGCTGTTGATATCGCTGTTAAAGAGCTCACTGCCATTGC
rJMSF051D11+ TCATCAAAAGCTGTTGATATCGCTGTTAAAGAGCTCACTGCCATTGC
rJMSF023P17+ TTCTTCTGATTTTTCATCAAAAGCTGTTGATATCGCTGTTAAAGAGCTCACTGCCATTGC
____________________________________________________________
consensus TTCTTCTGATTTTTCATCAAAAGCTGTTGATATCGCTGTTAAAGAGCTCACTGCCATTGC
. : . : . : . : . : . :
rJMFF005J22+ AAGTCCGGGTGAAGTTGACCAACAGCAGCTTGATCGTGCTAAACAAGCAACAAAATCTGC
rJMFF017O07+ AAGTCCGGGTGAAGTTGACCAACAGCAGCTTGATCGTGCTAAACAAGCAACAAAATCTGC
rJMFF002K08+ AAGTCCGGGTGAAGTTGACCAACAGCAGCTTGATCGTGCTAAACAAGCAACAAAATCTGC
rJMFF042B15+ AAACAAGCAACAAAATCTGC
rJMFF012D18+ AAGTCCGGGTGAAGTTGACCAACAGCAGCTTGATCGTGCTAAACAAGCAACAAAATCTGC
rJMFF011F21+ AAGTCCGGGTGAAGTTGACCAACAGCAGCTTGATCGTGCTAAACAAGCAACAAAATCTGC
rJMSF007G12+ AAGTCCGGGTGAAGTTGACCAACAGCAGCTTGATCGTGCTAAACAAGCAACAAAATCTGC
rJMSF051D11+ AAGTCCGGGTGAAGTTGACCAACAGCAGCTTGATCGTGCTAAACAAGCAACAAAATCTGC
rJMSF023P17+ AAGTCCGGGTGAAGTTGACCAACAGCAGCTTGATCGTGCTAAACAAGCAACAAAATCTGC
____________________________________________________________
consensus AAGTCCGGGTGAAGTTGACCAACAGCAGCTTGATCGTGCTAAACAAGCAACAAAATCTGC
. : . : . : . : . : . :
rJMFF005J22+ CATTTTAATGAACTTAGAGTCCAGGATGGTTGCATCAGAAGACATAGGCAGACAAATTTT
rJMFF017O07+ CATTTTAATGAACTTAGAGTCCAGGATGGTTGCATCAGAAGACATAGGCAGACAAATTTT
rJMFF002K08+ CATTTTAATGAACTTAGAGTCCAGGATGGTTGCATCAGAAGACATAGGCAGACAAATTTT
rJMFF042B15+ CATTTTAATGAACTTAGAGTCCAGGATGGTTGCATCAGAAGACATAGGCAGACAAATTTT
rJMFF012D18+ CATTTTAATGAACTTAGAGTCCAGGATGGTTGCATCAGAAGACATAGGCAGACAAATTTT
rJMFF011F21+ CATTTTAATGAACTTAGAGTCCAGGATGGTTGCATCAGAAGACATAGGCAGACAAATTTT
rJMSF007G12+ CATTTTAATGAACTTAGAGTCCAGGATGGTTGCATCAGAAGACATAGGCAGACAAATTTT
rJMSF051D11+ CATTTTAATGAACTTAGAGTCCAGGATGGTTGCATCAGAAGACATAGGCAGACAAATTTT
rJMSF023P17+ CATTTTAATGAACTTAGAGTCCAGGATGGTTGCATCAGAAGACATAGGCAGACAAATTTT
____________________________________________________________
consensus CATTTTAATGAACTTAGAGTCCAGGATGGTTGCATCAGAAGACATAGGCAGACAAATTTT
. : . : . : . : . : . :
rJMFF005J22+ GACATACGGAGAGAGGAAACCTGTGGAGCATTTCTTGAAAGCCATAGAAGAAGTTTCAGC
rJMFF017O07+ GACATNCGGAGAGAGGAAACCTGTGGAGCATTTCTTGAAAGCCATAGAAGAAGTTTCAGC
rJMFF002K08+ GACATACGGAGAGAGGAAACCTGTGGAGCATTTCTTGAAAGCCATAGAAGAAGTTTCAGC
rJMFF042B15+ GACATACGGAGAGAGGAAACCTGTGGAGCATTTCTTGAAAGCCATAGAAGAAGTTTCAGC
rJMFF012D18+ GACATACGGAGAGAGGAAACCTGTGGAGCATTTCTTGAAAGCCATAGAAGAAGTTTCAGC
rJMFF011F21+ GACATACGGAGAGAGGAAACCTGTGGAGCATTTCTTGAAAGCCATAGAAGAAGTTTCAGC
rJMSF007G12+ GACATACGGAGAGAGGAAACCTGTGGAGCATTTCTTGAAAGCCATAGAAGAAGTTTCAGC
rJMSF051D11+ GACATACGGAGAGAGGAAACCTGTGGAGCATTTCTTGAAAGCCATAGAAGAAGTTTCAGC
rJMSF023P17+ GACATACGGAGAGAGGAAACCTGTGGAGCATTTCTTGAAAGCCATAGAAGAAGTTTCAGC
____________________________________________________________
consensus GACATACGGAGAGAGGAAACCTGTGGAGCATTTCTTGAAAGCCATAGAAGAAGTTTCAGC
. : . : . : . : . : . :
rJMFF005J22+ AAAGGATATTGCTTCAATTGCACAAAAACTTATATCATCTCCTCTTACCATGGCGTCCTA
rJMFF017O07+ AAAGGATATTGCTTCAATTGCACAAAAACTTATATCATCTCCTCTTACCATGGCGTCCTA
rJMFF002K08+ AAAGGATATTGCTTCAATTGCACAAAAACTTATATCATCTCCTCTTACCATGGCGTCCTA
rJMFF042B15+ AAAGGATATTGCTTCAATTGCACAAAAACTTATATCATCTCCTCTTACCATGGCGTCCTA
rJMFF043D10+ TTATATCATCTCCTCTTACCATGGCGTCCTA
rJMFF012D18+ AAAGGATATTGCTTCAATTGCACAAAAACTTATATCATCTCCTCTTACCATGGCGTCCTA
rJMFF011F21+ AAAGGATATTGCTTCAATTGCACAAAAACTTATATCATCTCCTCTTACCATGGCGTCCTA
rJMSF007G12+ AAAGGATATTGCTTCAATTGCACAAAAACTTATATCATCTCCTCTTACCATGGCGTCCTA
rJMSF051D11+ AAAGGATATTGCTTCAATTGCACAAAAACTTATATCATCTCCTCTTACCATGGCGTCCTA
rJMSF023P17+ AAAGGATATTGCTTCAATTGCACAAAAACTTATATCATCTCCTCTTACCATGGCGTCCTA
____________________________________________________________
consensus AAAGGATATTGCTTCAATTGCACAAAAACTTATATCATCTCCTCTTACCATGGCGTCCTA
. : . : . : . : . : . :
rJMFF005J22+ TGGAGACGTTCTTTATCTTCCAAGTTATGACACCGTAAGCAGCTGGTTCCAGTCCAAATA
rJMFF017O07+ TGGAGACGTTCTTTATCTTCCAAGTTATGACACCGTAAGCAGCTGGTTCCAGTCCAAATA
rJMFF002K08+ TGGAGACGTTCTTTATCTTCCAAGTTATGACACCGTAAGCAGCTGGTTCCAGTCCAAATA
rJMFF042B15+ TGGAGACGTTCTTTATCTTCCAAGTTATGACACCGTAAGCAGCTGGTTCCAGTCCAAATA
rJMFF043D10+ TGGAGACGTTCTTTTTTTTCCAAGTTATGCCCCCGTAAGCAGCTGGTTCCAGTCCAAATA
rJMFF012D18+ TGGAGACGTTCTTTATCTTCCAAGTTATGACACCGTAAGCAGCTGGTTCCAGTCCAAATA
rJMFF011F21+ TGGAGACGTTCTTTATCTTCCAAGTTATGACACCGTAAGCAGCTGGTTCCAGTCCAAATA
rJMSF007G12+ TGGAGACGTTCTTTATCTTCCAAGTTATGACACCGTAAGCAGCTGGTTCCAGTCCAAATA
rJMSF051D11+ TGGAGACGTTCTTTATCTTCCAAGTTATGACACCGTAAGCAGCTGGTTCCAGTCCAAATA
rJMSF023P17+ TGGAGACGTTCTTTATCTTCCAAGTTATGACACCGTAAGCAGCTGGTTCCAGTCCAAATA
____________________________________________________________
consensus TGGAGACGTTCTTTATCTTCCAAGTTATGACACCGTAAGCAGCTGGTTCCAGTCCAAATA
. : . : . : . : . : . :
rJMFF005J22+ ATTTTCTTTTTCAGCTGCAGCCAGTTCCAGTCCGAATAATTTTTTCAGTGGGAAAGTCAC
rJMFF017O07+ ATTTTCTTTTTCAGCTGCAGCCAGTTCCAGTCCGAATAATTTTTTCAGTGGGAAAGTCAC
rJMFF002K08+ ATTTTCTTTTTCAGCTGCAGCCAGTTCCAGTCCGAATAATTTTTTCAGTGGGAAAGTCAC
rJMFF042B15+ ATTTTCTTTTTCAGCTGCAGCCAGTTCCAGTCCGAATAATTTTTTCAGTGGGAAAGTCAC
rJMFF043D10+ ATTTTTTTTTTCAGCTGCAGCCAGTTCCAGTCCGAATAATTTTTTCAGTGGGAAAGTCCC
rJMFF012D18+ ATTTTCTTTTTCAGCTGCAGCCAGTTCCAGTCCGAATAATTTTTTCAGTGGGAAAGTCAC
rJMFF011F21+ ATTTTCTTTTTCAGCTGCAGCCAGTTCCAGTCCGAATAATTTTTTCAGTGGGAAAGTCAC
rJMSF007G12+ ATTTTCTTTTTCAGCTGCAGCCAGTTCCAGTCCGAATAATTTTTTCAGTGGGAAAGTCAC
rJMSF051D11+ ATTTTCTTTTTCAGCTGCAGCCAGTTCCAGTCCGAATAATTTTTTCAGTGGGAAAGTCAC
rJMSF023P17+ ATTTTCTTTTTCAGCTGCAGCCAGTTCCAGTCCGAATAATTTTTTCAGTGGGAAAGTCAC
____________________________________________________________
consensus ATTTTCTTTTTCAGCTGCAGCCAGTTCCAGTCCGAATAATTTTTTCAGTGGGAAAGTCAC
. : . : . : . : . : . :
rJMFF005J22+ AAGTTGACAACCTTTTTTTTGGACATTTGAAAGTTTTTGAGCTACCTTTTGGCCATATTT
rJMFF017O07+ AAGTTGACAACCTTTTTTTTGGACATTTGAAAGTTTTTGAGCTACCTTTTGGCCATATTT
rJMFF002K08+ AAGTTGACAACCTTTTTTTTGGACATTTGAAAGTTTTTGAGCTACCTTTTGGCCATATTT
rJMFF042B15+ AAGTTGACAACCTTTTTTTTGGACATTTGAAAGTTTTTGAGCTACCTTTTGGCCATATTT
rJMFF043D10+ AAGTTGCCACCCTTTTTTTTGGACATTTGAAAGTTTTTGAGCTCCCTTTTGGCCATATTT
rJMFF012D18+ AAGTTGACAACCTTTTTTTTGGACATTTGAAAGTTTTTGAGCTACCTTTTGGCCATATTT
rJMFF011F21+ AAGTTGACAACCTTTTTTTTGGACATTTGAAAGTTTTTGAGCTACCTTTTGGCCATATTT
rJMSF007G12+ AAGTTGACAACCTTTTTTTTGGACATTTGAAAGTTTTTGAGCTACCTTTTGGCCATATTT
rJMSF051D11+ AAGTTGACAACCTTTTTTTTGGACATTTGAAAGTTTTTGAGCTACCTTTTGGCCATATTT
rJMSF023P17+ AAGTTGACAACCTTTTTTTTGGACATTTGAAAGTTTTTGAGCTACCTTTTGGCCATATTT
____________________________________________________________
consensus AAGTTGACAACCTTTTTTTTGGACATTTGAAAGTTTTTGAGCTACCTTTTGGCCATATTT
. : . : . : . : . : . :
rJMFF005J22+ A
rJMFF017O07+ ATGGAAAAAATAAGTACACTCTTAAACTATAGGTGAATCTTAGATTGCGAGATACAGTCG
rJMFF002K08+ ATGGAAAAAATAAGTACACTCTTAAACTATAGGTGAATCTTAGATTGCGAGATACAGTCG
rJMFF042B15+ ATGGAAAAAATAAGTACACTCTTAAACTATAGGTGAATCTTAGATTGCGAGATACAGTCG
rJMFF043D10+ ATGGAAAAAATAAGTCCACTCTTAAACTATAGGGGAATCTTAGATTGCGAGATACAGTGG
rJMFF012D18+ ATGGAAAAAATAAGTACACTCTTAAACTATAGGTGAATCTTAGATTGCGAGATACAGTCG
rJMFF011F21+ ATGGAAAAAATAAGTACACTCTTAAACTATAGGTGAATCTTAGATTGCGAGATACAGTCG
rJMSF007G12+ ATGGAAAAAATAAGTACACTCTTAAACTATAGGTGAATCTTAGATTGCGAGATACAGTCG
rJMSF051D11+ ATGGAAAAAATAAGTACACTCTTAAACTATAGGTGAATCTTAGATTGCGAGATACAGTCG
rJMSF023P17+ ATGGAAAAAATAAGTACACTCTTAAACTATAGGTGAATCTTAGATTGCGAGATACAGTCG
____________________________________________________________
consensus ATGGAAAAAATAAGTACACTCTTAAACTATAGGTGAATCTTAGATTGCGAGATACAGTCG
. : . : . : . : . : . :
rJMFF017O07+ AGGCAATTTGGTATGCACAGATTCTTCACTGTATCATGTATGATTCTTGTAATTGTTTCC
rJMFF002K08+ AGGCAATTTGGTATGCACAGATTCTTCACTGTATCATGTATGATTCTTGTAATTGTTTCC
rJMFF042B15+ AGGCAATTTGGTATGCACAGATTCTTCACTGTATCATGTATGATTCTTGTAATTGTTTCC
rJMFF043D10+ AGGCAATTTGGTATGCACAGATTTTTCACTGTATCAGGTAGGATTCTTGTAATTGTTTCC
rJMFF012D18+ AGGCAATTTGGTATGCACAGATTCTTCACTGTATCATGTATGATTCTTGTAATTGTTTCC
rJMFF011F21+ AGGCAATTTGGTATGCACAGATTCTTCACTGTATCATGTATGATTCTTGTAATTGTTTCC
rJMSF007G12+ AGGCAATTTGGTATGCACAGATTCTTCACTGTATCATGTATGATTCTTGTAATTGTTTCC
rJMSF051D11+ AGGCAATTTGGTATGCACAGATTCTTCACTGTATCATGTATGATTCTTGTAATTGTTTCC
rJMSF023P17+ AGGCAATTTGGTATGCACAGATTCTTCACTGTATCATGTATGATTCTTGTAATTGTTTCC
____________________________________________________________
consensus AGGCAATTTGGTATGCACAGATTCTTCACTGTATCATGTATGATTCTTGTAATTGTTTCC
. : . : . : . : . : . :
rJMFF017O07+ TCAACTGTTCATTCTTGTTTCGTTGTGAAACTTA
rJMFF002K08+ TCAACTGTTCATTCTTGTTTCGTTGTGAAACTTAAT
rJMFF042B15+ TCAACTGTTCATTCTTGTTTCGTTGTGAAACTTAATTGGAATATTTTGGGATTCAGGCCC
rJMFF043D10+ TCAACTGTTCATTCTTGTTTCGTTGGGAAACTTAATTGGAATATTTTGGGATTCAGGCCC
rJMFF012D18+ TCAACTGTTCATTCTTGTTTCGTTGTGAAACTTAATTGGAATATTTTGGGATTCAGGCCC
rJMFF011F21+ TCAACTGTTCATTCTTGTTTCGTTGTGAAACTTAATTGGAATATTTTGGGATTCAGGCCC
rJMSF007G12+ TCAACTGTTCATTCTTGTTTCGTTGTGAAACTTAATTGGAATATTTTGGGATTCAGGCCC
rJMSF051D11+ TCAACTGTTCATTCTTGTTTCGTTGTGAAACTTAATTGGAATATTTTGGGATTCAGGCCC
rJMSF023P17+ TCAACTGTTCATTCTTGTTTCGTTGTGAAACTTAATTGGAATATTTTGGGATTCAGGCCC
____________________________________________________________
consensus TCAACTGTTCATTCTTGTTTCGTTGTGAAACTTAATTGGAATATTTTGGGATTCAGGCCC
. : . : . : . : . : . :
rJMFF042B15+ C
rJMFF043D10+ C
rJMFF012D18+ CTAAGGAAAGACCC
rJMFF011F21+ CTAAGGAAAGACCCAGAGC
rJMSF007G12+ CTAAGGAAAGACCCAGAGCTGTTGACAAAGCTCATATGATTCTCAGGTTTTGGACAATA
rJMSF051D11+ CTAAGGAAAGACCCAGAGCTGTTGACAAAGCTCATATGATTCTCAGGTTTTGGACAATA
rJMSF023P17+ CTAAGGAAAGACCCAGAGCTGTTGACAAAGCTCATATGATTCTCAGGTTTTGGACAATAC
____________________________________________________________
consensus CTAAGGAAAGACCCAGAGCTGTTGACAAAGCTCATATGATTCTCAGGTTTTGGACAATAC