Contig 011320:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014A05Sequence531003118 (3)760011320 (2)ref|XP_009784524.1|2e-87PREDICTED: IAA-alanine resistance protein 1 [Nicotiana sylvestris]
JMSF022H05Sequence118018911763011320 (2)ref|XP_006448076.1|2e-78hypothetical protein CICLE_v10018249mg, partial [Citrus clementina] gb|ESR61316.

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF014A05+ CTGACTCATGAGAAAACTGGAAGCTTACCAGAAAAGG
                      ____________________________________________________________
consensus CTGACTCATGAGAAAACTGGAAGCTTACCAGAAAAGG
 
. : . : . : . : . : . :
rJMFF014A05+ AATCTGGTGGAAGTAAAATTGATGGTCAATCTGCTGAGATGCTTAATGGGGAGAAGGGCA
rJMSF022H05+ AAATTGATGGTCAATCTGCTGAGATGCTTAAT-GGGAGAAGGGCA
                      ____________________________________________________________
consensus AATCTGGTGGAAGTAAAATTGATGGTCAATCTGCTGAGATGCTTAATGGGGAGAAGGGCA
 
. : . : . : . : . : . :
rJMFF014A05+ GCAAAAACGCTGTTCTCAGGAAGAGAAACAGTGGTGGTGATGATGGTAAACTTGAAACCA
rJMSF022H05+ GC-AAAACGCTGTTCTCAGGAAGAGAAACAGTGGTGGTGATGATGGTAAACTTGAAACCA
                      ____________________________________________________________
consensus GCAAAAACGCTGTTCTCAGGAAGAGAAACAGTGGTGGTGATGATGGTAAACTTGAAACCA
 
. : . : . : . : . : . :
rJMFF014A05+ ACGGAGAGGCTTTAAATTCATCCAAAGATAGTGCTAAATCCACCAAAGATGGGCCTGCTA
rJMSF022H05+ ACGGAGAGGCTTTAAATTCATCCAAAGATAGTGCTAAATCCACCAAAGAAGGGCCTGCTA
                      ____________________________________________________________
consensus ACGGAGAGGCTTTAAATTCATCCAAAGATAGTGCTAAATCCACCAAAGATGGGCCTGCTA
 
. : . : . : . : . : . :
rJMFF014A05+ AATCACAGTCAAGCCTGGTGTTTGGTTATCTCAATCTCTTCTCTGATGGTGTTCATAATT
rJMSF022H05+ AATCACAGTCAAGCCTGGTGTTTGGTTATCTCAATCTCTTCTCTGATGGTGTTCATAATT
                      ____________________________________________________________
consensus AATCACAGTCAAGCCTGGTGTTTGGTTATCTCAATCTCTTCTCTGATGGTGTTCATAATT
 
. : . : . : . : . : . :
rJMFF014A05+ TTACTGATGGGATGGCATTAGGTAGTGCTTTCCTGCTTTATGGATCAGTTGGTGGGTGGT
rJMSF022H05+ TTACTGATGGGATGGCATTAGGTAGTGCTTTCCTGCTTTATGGATCAGTTGGTGGGTGGT
                      ____________________________________________________________
consensus TTACTGATGGGATGGCATTAGGTAGTGCTTTCCTGCTTTATGGATCAGTTGGTGGGTGGT
 
. : . : . : . : . : . :
rJMFF014A05+ CAAGAACATTGTTTCTGCTTGCTCATGAGCTTCCTCAGGAGATAGGTGACTTTGGAATCT
rJMSF022H05+ CAAGAACATTGTTTCTGCTTGCTCATGAGCTTCCTCAGGAGATAGGTGACTTTGGAATCT
                      ____________________________________________________________
consensus CAAGAACATTGTTTCTGCTTGCTCATGAGCTTCCTCAGGAGATAGGTGACTTTGGAATCT
 
. : . : . : . : . : . :
rJMFF014A05+ TGGTGAGGTCTGGTTTCAGTGTTTCGAAAGCATTGTTTTTTAACTTCTTATCGGCACTAA
rJMSF022H05+ TGGTGAGGTCTGGTTTCAGTGTTTCGAAAGCATTGTTTTTTAACTTCTTATCGGCACTAA
                      ____________________________________________________________
consensus TGGTGAGGTCTGGTTTCAGTGTTTCGAAAGCATTGTTTTTTAACTTCTTATCGGCACTAA
 
. : . : . : . : . : . :
rJMFF014A05+ TGGCACTTGCAGGAACTGCACTGGCCTTGGTGCTAGGACAAGATCCAGGGCAGTCATCAT
rJMSF022H05+ TGGCACTTGCAGGAACTGCACTGGCCTTGGTGCTAGGACAAGATCCAGGGCAGTCATCAT
                      ____________________________________________________________
consensus TGGCACTTGCAGGAACTGCACTGGCCTTGGTGCTAGGACAAGATCCAGGGCAGTCATCAT
 
. : . : . : . : . : . :
rJMFF014A05+ TGATTGAGGGATTCACAGCAGGTGGGTTTATTTACGTTGCAGTTGCGGGAGTGCTGGCAG
rJMSF022H05+ TGATTGAGGGATTCACAGCAGGTGGGTTTATTTACGTTGCAGTTGCGGGAGTGCTGGCAG
                      ____________________________________________________________
consensus TGATTGAGGGATTCACAGCAGGTGGGTTTATTTACGTTGCAGTTGCGGGAGTGCTGGCAG
 
. : . : . : . : . : . :
rJMFF014A05+ AATCAAACAGCGGCAGCTCCTTATCCGTTAAGAGTACGGTGATTCAACTAATCTCTTTGT
rJMSF022H05+ AATCAAACAGCGGCAGCTCCTTATCCGTTAAGAGTACGGTGATTCAACTAATCTCTTTGT
                      ____________________________________________________________
consensus AATCAAACAGCGGCAGCTCCTTATCCGTTAAGAGTACGGTGATTCAACTAATCTCTTTGT
 
. : . : . : . : . : . :
rJMFF014A05+ CGTTAGGCATGGCTGTGGCTCTTTCAATATCTCTTGTAGAATAGAATGATGCTATGATAT
rJMSF022H05+ CGTTAGGCATGGCTGTGGCTCTTTCAATATCTCTTGTAGAATAGAATGATGCTATGATAT
                      ____________________________________________________________
consensus CGTTAGGCATGGCTGTGGCTCTTTCAATATCTCTTGTAGAATAGAATGATGCTATGATAT
 
. : . : . : . : . : . :
rJMFF014A05+ GCTGTGTAGCACGTACGTCACGTCACGGTTGCATTAATGGCTTCTTTCTCCTATGCTCAA
rJMSF022H05+ GCTGTGTAGCACGTACGTCACGTCACGGTTGCATTAATGGCTTCTTTCTCCTATGCTCAA
                      ____________________________________________________________
consensus GCTGTGTAGCACGTACGTCACGTCACGGTTGCATTAATGGCTTCTTTCTCCTATGCTCAA
 
. : . : . : . : . : . :
rJMFF014A05+ TTT
rJMSF022H05+ TTTTCCAATACGAATTTGGTTGTCTGTAGCAATGTGCACTTCCTGGCTTATTATCGTGCT
                      ____________________________________________________________
consensus TTTTCCAATACGAATTTGGTTGTCTGTAGCAATGTGCACTTCCTGGCTTATTATCGTGCT