Contig 011314:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009P18Sequence609011314 (3)emb|CDO97706.1|1e-25unnamed protein product [Coffea canephora]
JMSF003J03Sequence282019892719011314 (3)ref|XP_009792173.1|7e-96PREDICTED: protein NRT1/ PTR FAMILY 7.2-like [Nicotiana sylvestris]
JMSF020P24Sequence673009221 (2)ref|XP_009792173.1|5e-97PREDICTED: protein NRT1/ PTR FAMILY 7.2-like [Nicotiana sylvestris]758011314 (3)ref|XP_009792173.1|8e-09PREDICTED: protein NRT1/ PTR FAMILY 7.2-like [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF003J03+           ACCAAGGTCAGTGAAACAGAACCACATATGGTAGATATCCATAAGGCAAGTGCCCATTT
                      ____________________________________________________________
consensus              ACCAAGGTCAGTGAAACAGAACCACATATGGTAGATATCCATAAGGCAAGTGCCCATTT
 
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rJMSF003J03+          CCCTAGATTTTCAATATACACCAAAACTATCTCTGCAATCAAGGATCCAAGGTTAAATGC
                      ____________________________________________________________
consensus             CCCTAGATTTTCAATATACACCAAAACTATCTCTGCAATCAAGGATCCAAGGTTAAATGC
 
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rJMSF003J03+          AACATAAAAGTAGCTATAGAATTTGGTCTTTGATTTGCTCTCTTCAGGATCTTGTTCATC
                      ____________________________________________________________
consensus             AACATAAAAGTAGCTATAGAATTTGGTCTTTGATTTGCTCTCTTCAGGATCTTGTTCATC
 
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rJMSF003J03+          AAATTGATCTGCTCCTAAGGTTGCAAGTACAGGTTCTATAGAGCCACTCCCTATAGCTAG
                      ____________________________________________________________
consensus             AAATTGATCTGCTCCTAAGGTTGCAAGTACAGGTTCTATAGAGCCACTCCCTATAGCTAG
 
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rJMSF003J03+          TAAATATATAGAGACATAGAACATTGCAACTTCAATTCTTGATTGTGGGTTGCACACTTC
                      ____________________________________________________________
consensus             TAAATATATAGAGACATAGAACATTGCAACTTCAATTCTTGATTGTGGGTTGCACACTTC
 
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rJMSF003J03+          TCCTATCCTCCCACACCCTTCAGGTTCAAGCAGAGACACATGAGTTAACAGGGACAATGC
                      ____________________________________________________________
consensus             TCCTATCCTCCCACACCCTTCAGGTTCAAGCAGAGACACATGAGTTAACAGGGACAATGC
 
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rJMSF003J03+          CACCAATCCCTGCAAAACCGATCAACTTCTGGAACTTCACTTACAAAAACCAAGCTTTCA
                      ____________________________________________________________
consensus             CACCAATCCCTGCAAAACCGATCAACTTCTGGAACTTCACTTACAAAAACCAAGCTTTCA
 
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rJMSF003J03+          GAAAGCAACTTCACTTACAATATTCATGACAGCAAGGGAGATGGTACAAGTGAGATATCT
JMFN009P18-                                                            GTGAGATATCT
                      ____________________________________________________________
consensus             GAAAGCAACTTCACTTACAATATTCATGACAGCAAGGGAGATGGTACAAGTGAGATATCT
 
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rJMSF003J03+          TCCCATGTAAGAGTCACTGAGGAATGCACCAACGAGTGGGAAAATGTTGACGGTTCCCAT
JMFN009P18-           TCCCATGTAAGAGTCACTGAGGAATGCACCAACGAGTGGGAAAATGTTGACGGTTCCCAT
                      ____________________________________________________________
consensus             TCCCATGTAAGAGTCACTGAGGAATGCACCAACGAGTGGGAAAATGTTGACGGTTCCCAT
 
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rJMSF003J03+          CCACCTGCTAAACAAGTTTGCAGCATCTGCATTTGATTTTCTCATGACAGACTTGGAGAA
JMFN009P18-           CCACCTGCTAAACAAGTTTGCAGCATCTGCATTTGATTTTCTCATGACAGACTTGGAGAA
                      ____________________________________________________________
consensus             CCACCTGCTAAACAAGTTTGCAGCATCTGCATTTGATTTTCTCATGACAGACTTGGAGAA
 
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rJMSF003J03+          AAGGACCATGTTTACTTCCACTCCAGTGAAGGCAAGTGCAGCCAATCCTTCACT      
JMFN009P18-           AAGGACCATGTTTACTTCCACTCCAGTGAAGGCAAGTGCAGCCAATCCTTCACTGGCTGT
rJMSF020P24+                                                          TTCACTGGCTGT
                      ____________________________________________________________
consensus             AAGGACCATGTTTACTTCCACTCCAGTGAAGGCAAGTGCAGCCAATCCTTCACTGGCTGT
 
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JMFN009P18-           ATCAAGCAAACAAAAGATAGTCAATCACTAACGTTTTAAAGATATTCTACATATTTGGAC
rJMSF020P24+          ATCAAGCAAACAAAAGATAGTCAATCACTAACGTTTTAAAGATATTCTACATATTTGGAC
                      ____________________________________________________________
consensus             ATCAAGCAAACAAAAGATAGTCAATCACTAACGTTTTAAAGATATTCTACATATTTGGAC
 
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JMFN009P18-           CATCCAATGGCTGCCAATACACCTTTAAGACTCATTCTTGATCTGTTACCGGCTGCCATG
rJMSF020P24+          CATCCAATGGCAGCCAATACACCTTTAAGACTCATTCTTGATCTGTTACCGGCTGCCATG
                      ____________________________________________________________
consensus             CATCCAATGGCTGCCAATACACCTTTAAGACTCATTCTTGATCTGTTACCGGCTGCCATG
 
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JMFN009P18-           TAATTAAACTTACCTAACAGCAGTTTTCCTGATTTCCATCCACCAGTTTTTCTCTTGAGT
rJMSF020P24+          TAATTAAACTTACCTAACAGCATTTTTCCTGATTTCCATCCACCAGTTTTCTTCTTGAGT
                      ____________________________________________________________
consensus             TAATTAAACTTACCTAACAGCATTTTTCCTGATTTCCATCCACCAGTTTTTTTCTTGAGT
 
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JMFN009P18-           GCAGGTTTTCCATGGCTATCTGTTGATCCATCTCTGGTGCAAGAATCCAGGAGTCTCATT
rJMSF020P24+          GCAGGTTTTCCATGGCTATCTGTTGATCCATCTCTGGTGCAAGAATCCAGGAGTCTCGTT
                      ____________________________________________________________
consensus             GCAGGTTTTCCATGGCTATCTGTTGATCCATCTCTGGTGCAAGAATCCAGGAGTCTCGTT
 
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JMFN009P18-           TTCTCTTCCTGTTATGGATACATTGAGCTTAAACCCATCAAG                  
rJMSF020P24+          TTCTCTTCCTGTTATGGATACATTGAGCTTAAACCCATCAAGGAACAGAACCAAGTTGTG
                      ____________________________________________________________
consensus             TTCTCTTCCTGTTATGGATACATTGAGCTTAAACCCATCAAGGAACAGAACCAAGTTGTG
 
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rJMSF020P24+          GATTGGCTTGCGAGAAATCACGAATTGGATCTTGATTTGCAGGAATAGAACCAAGTTGTG
                      ____________________________________________________________
consensus             GATTGGCTTGCGAGAAATCACGAATTGGATCTTGATTTGCAGGAATAGAACCAAGTTGTG
 
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rJMSF020P24+          GATTGGCTTGGGAGAAATCACGAATTGGGTCCTGATTTGCAGGAATAGAACCAAGTTGCG
                      ____________________________________________________________
consensus             GATTGGCTTGGGAGAAATCACGAATTGGGTCCTGATTTGCAGGAATAGAACCAAGTTGCG
 
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rJMSF020P24+          GATTGGCTTGCGAGAAATCACGAATTGGGTCCTGATTTGCAGGAACAGAACCAAGTTGCG
                      ____________________________________________________________
consensus             GATTGGCTTGCGAGAAATCACGAATTGGGTCCTGATTTGCAGGAACAGAACCAAGTTGCG
 
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rJMSF020P24+          GATTGGCTTGCGAGAAATCGCGAATTGGGTCCTGATTTGGCCTTGTTGTCTTCCTGTCCG
                      ____________________________________________________________
consensus             GATTGGCTTGCGAGAAATCGCGAATTGGGTCCTGATTTGGCCTTGTTGTCTTCCTGTCCG
 
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rJMSF020P24+          AATGCTGACCTTGCGGCACGCGTCCAGAAAGACATGATCCGGGTACCTTACCTAGCACCC
                      ____________________________________________________________
consensus             AATGCTGACCTTGCGGCACGCGTCCAGAAAGACATGATCCGGGTACCTTACCTAGCACCC
 
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rJMSF020P24+          GAGGAGATTGATTTTGTTGTCTTTTTTTTCTTTGTCGGGGCTTCGTTCTTCCCTTTCCCT
                      ____________________________________________________________
consensus             GAGGAGATTGATTTTGTTGTCTTTTTTTTCTTTGTCGGGGCTTCGTTCTTCCCTTTCCCT
 
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rJMSF020P24+          CAAAGAAAAAAAAATAAATATCTTTCTAATCTTTCTGTGAATTATATTTAAAGACTTTGG
                      ____________________________________________________________
consensus             CAAAGAAAAAAAAATAAATATCTTTCTAATCTTTCTGTGAATTATATTTAAAGACTTTGG