Contig 011312:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF020O17+                                                        CACAAGCAGATGAC
                      ____________________________________________________________
consensus                                                           CACAAGCAGATGAC
 
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rJMSF020O17+          ACCAGAGGCCGCATATGACTATGTGAGGTCCATTAGGCCAAGAGTTTCACTCGCCTCATC
                      ____________________________________________________________
consensus             ACCAGAGGCCGCATATGACTATGTGAGGTCCATTAGGCCAAGAGTTTCACTCGCCTCATC
 
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rJMSF020O17+          CCAGTGGCAGGCTGTTCAAGAGTACTATTACAGAGTAAGGAAAACTGAAAGTAGTGCCGA
                      ____________________________________________________________
consensus             CCAGTGGCAGGCTGTTCAAGAGTACTATTACAGAGTAAGGAAAACTGAAAGTAGTGCCGA
 
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rJMSF020O17+          TACTTTATTAGAGAAGGCCTTAATCCGCCCTTCTAATGGGGACCTGGCTGCTTTTGATGA
                      ____________________________________________________________
consensus             TACTTTATTAGAGAAGGCCTTAATCCGCCCTTCTAATGGGGACCTGGCTGCTTTTGATGA
 
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rJMSF020O17+          CGACTCCCTTGTCCTAGTCACCGAGTCTGACCTTGATGGATACGATGAAAATCTCGAGTG
                      ____________________________________________________________
consensus             CGACTCCCTTGTCCTAGTCACCGAGTCTGACCTTGATGGATACGATGAAAATCTCGAGTG
 
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rJMSF020O17+          TGATTTAGGGGGCAACAACGTGTTGGCTGAGTTGAACCTAGCTTGCAGAGTCCAGTTTGC
                      ____________________________________________________________
consensus             TGATTTAGGGGGCAACAACGTGTTGGCTGAGTTGAACCTAGCTTGCAGAGTCCAGTTTGC
 
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rJMSF020O17+          CGGCCAGGCAGCCATTGCAAGGCTTTCGTGCCTATGGCTTAGATGTAATCCGGGGCAGAA
                      ____________________________________________________________
consensus             CGGCCAGGCAGCCATTGCAAGGCTTTCGTGCCTATGGCTTAGATGTAATCCGGGGCAGAA
 
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rJMSF020O17+          AACGTCGGGGAAGAAGCTCGAAGGGTCGGTGACACAGAACCAGTTAGAGATCCATGTTTA
                      ____________________________________________________________
consensus             AACGTCGGGGAAGAAGCTCGAAGGGTCGGTGACACAGAACCAGTTAGAGATCCATGTTTA
 
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rJMFF049D10+                                          GGAATGTCCTTGGCTTTTATTTGCGGGA
rJMSF020O17+          TTGAGATGCACTCTACTGGCTAGGGAACTTAGGGAATGTCCTTGGCTTCTATTTGCGGGA
                      ____________________________________________________________
consensus             TTGAGATGCACTCTACTGGCTAGGGAACTTAGGGAATGTCCTTGGCTTTTATTTGCGGGA
 
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rJMFF049D10+          AGCCTTAGGAGAGGGGAGTTGCAATAATGGGTTTTCTTTTTTCGCGTTTTTGTATGAGTA
rJMSF020O17+          AGCCTTAGGAGAGGTGAGTTGCAATAATGGGTTTTCTTTTTTCGCGTTTTTGTATGAGTA
                      ____________________________________________________________
consensus             AGCCTTAGGAGAGGTGAGTTGCAATAATGGGTTTTCTTTTTTCGCGTTTTTGTATGAGTA
 
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rJMFF049D10+          GCAGATGTGTGAAAGCATTTCGATTTTGGAACGCTTTTTCCAAGTGCAAAAACTGTGCTT
rJMSF020O17+          GCAGATGTGTGAAAGCATTTCGATTCTGGAACGCTTTCTCCAAGTGCAAAAACTGTGCTT
                      ____________________________________________________________
consensus             GCAGATGTGTGAAAGCATTTCGATTTTGGAACGCTTTTTCCAAGTGCAAAAACTGTGCTT
 
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rJMFF049D10+          TGAGTCTTGTCTTTGAAAGAGAAAAAAGTGGTAGGGGCTTTTAATTTGTGTT        
rJMSF020O17+          TGAGTCTTGTCTTTGAAAGAGAAAAAAGTGGTAGGGGCTTTTAATTTGTGTTAAGATGAG
                      ____________________________________________________________
consensus             TGAGTCTTGTCTTTGAAAGAGAAAAAAGTGGTAGGGGCTTTTAATTTGTGTTAAGATGAG
 
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rJMSF020O17+          TTGTGCTATAAAATGAAATCATATTTTTTTTCTCCCCATCCCCCTTACTCCATGTGTGAT
                      ____________________________________________________________
consensus             TTGTGCTATAAAATGAAATCATATTTTTTTTCTCCCCATCCCCCTTACTCCATGTGTGAT