| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF020J16 | Sequence | 694 | 011310 (6) | ref|XP_010656118.1| | 3e-68 | PREDICTED: uncharacterized protein LOC100266448 isoform X1 [Vitis vinifera] | 775 | 011310 (6) | ref|XP_009630779.1| | 230 | PREDICTED: uncharacterized protein LOC104120671 [Nicotiana tomentosiformis] |
| JMSF035B19 | Sequence | 693 | 011310 (6) | ref|XP_006353560.1| | 337 | PREDICTED: uncharacterized protein LOC102597756 [Solanum tuberosum] | 722 | 011310 (6) | ref|XP_009630779.1| | 284 | PREDICTED: uncharacterized protein LOC104120671 [Nicotiana tomentosiformis] |
| JMSF041F04 | Sequence | 733 | 011310 (6) | ref|XP_006353560.1| | 339 | PREDICTED: uncharacterized protein LOC102597756 [Solanum tuberosum] | 864 | 011310 (6) | ref|XP_010656119.1| | 1e-113 | PREDICTED: uncharacterized protein LOC100266448 isoform X2 [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMSF020J16- GAAAACT
____________________________________________________________
consensus GAAAACT
. : . : . : . : . : . :
JMSF020J16- GAATTACAGTGGCGTGAGGCGGGGCAATTTGAGATTCTACTCGGAGAAGAAGAGAAAAAT
JMSF035B19- GGAGAAGAAGAGAAAAAT
JMSF041F04- ACAGTGGCGTGAGGCGGGGCAATTTGAGATTCTACTCGGAGAAGAAGAGAAAAAT
____________________________________________________________
consensus GAATTACAGTGGCGTGAGGCGGGGCAATTTGAGATTCTACTCGGAGAAGAAGAGAAAAAT
. : . : . : . : . : . :
JMSF020J16- GTCAACTGAAAGGCATAGTTCTGGGACCTTCGCATCTCCTGAAGAAAATACTCTATTCCT
JMSF035B19- GTCAACTGAAAGGCATAGTTCTGGGACCTTCGCATCTCCTGAAGAAAATACTCTATTCCT
JMSF041F04- GTCAACTGAAAGGCATAGTTCTGGGACCTTCGCATCTCCTGAAGAAAATACTCTATTCCT
____________________________________________________________
consensus GTCAACTGAAAGGCATAGTTCTGGGACCTTCGCATCTCCTGAAGAAAATACTCTATTCCT
. : . : . : . : . : . :
JMSF020J16- TGACATACTACACGAGGCACCTTTATTTGGTCATCGGAAGCCTACAAGGATTGTTGGGAG
JMSF035B19- TGACATACTACACGAGGCACCTTTATTTGGTCATCGGAAGCCTACAAGGATTGTTGGGAG
JMSF041F04- TGACATACTACACGAGGCACCTTTATTTGGTCATCGGAAGCCTACAAGGATTGTTGGGAG
____________________________________________________________
consensus TGACATACTACACGAGGCACCTTTATTTGGTCATCGGAAGCCTACAAGGATTGTTGGGAG
. : . : . : . : . : . :
JMSF020J16- CATTCTCTACTGTTTTCTATT----GGTTTTGCTAGTTTGGCTGTTGGAGCTACTTGGAT
JMSF035B19- CATTCTCTACTGTTTTCTATTGGCAGGTTTTGCTAGTTTGGCTGTTGGAGCTACTTGGAT
JMSF041F04- CATTCTCTACTGTTTTCTATTGGCAGGTTTTGCTAGTTTGGCTGTTGGAGCTACTTGGAT
____________________________________________________________
consensus CATTCTCTACTGTTTTCTATTGGCAGGTTTTGCTAGTTTGGCTGTTGGAGCTACTTGGAT
. : . : . : . : . : . :
JMSF020J16- ATTTCATCCTATAAAAGAATTAGTTTCTCCCCTGCTGTGCAGTTTTAATGTTATCCTTCT
JMSF035B19- ATTTCATCCTATAAAAGAATTAGTTTCTCCCCTGCTGTGCAGTTTTAATGTTATCCTTCT
JMSF041F04- ATTTCATCCTATAAAAGAATTAGTTTCTCCCCTGCTGTGCAGTTTTAATGTTATCCTTCT
____________________________________________________________
consensus ATTTCATCCTATAAAAGAATTAGTTTCTCCCCTGCTGTGCAGTTTTAATGTTATCCTTCT
. : . : . : . : . : . :
JMSF020J16- GTTTACCACAGGCATTTTTCAACAATACCTAGTATACCAAGTGAAAAAAATCCGACTACA
JMSF035B19- GTTTACCACAGGCATTTTTCAACAATACCTAGTATACCAAGTGAAAAAAATCCGACTACA
JMSF041F04- GTTTACCACAGGCATTTTTCAACAATACCTAGTATACCAAGTGAAAAAAATCCGACTACA
____________________________________________________________
consensus GTTTACCACAGGCATTTTTCAACAATACCTAGTATACCAAGTGAAAAAAATCCGACTACA
. : . : . : . : . : . :
JMSF020J16- GGGCTACTACATTTTCAGCCAGAAGTTGAAGCATATAATCCGTTTACCATTTGCCACGAT
JMSF035B19- GGGCTACTACATTTTCAGCCAGAAGTTGAAGCATATAATCCGTTTACCATTTGCCACGAT
JMSF041F04- GGGCTACTACATTTTCAGCCAGAAGTTGAAGCATATAATCCGTTTACCATTTGCCACGAT
rJMSF041F04+ TTTTCAGCCAGAAGTTGAAGCATATAATCCGTTTACCATTTGCCACGAT
____________________________________________________________
consensus GGGCTACTACATTTTCAGCCAGAAGTTGAAGCATATAATCCGTTTACCATTTGCCACGAT
. : . : . : . : . : . :
JMSF020J16- TGCTTATGGAACTGCTGCAATGCTGCTTGTCATGGTTTGGAAACCACACATTAGCTTTCT
JMSF035B19- TGCTTATGGAACTGCTGCAATGCTGCTTGTCATGGTTTGGAAACCACACATTAGCTTTCT
JMSF041F04- TGCTTATGGAACTGCTGCAATGCTGCTTGTCATGGTTTGGAAACCACACATTAGCTTTCT
rJMSF041F04+ TGCTTATGGAACTGCTGCAATGCTGCTTGTCATGGTTTGGAAACCACACATTAGCTTTCT
____________________________________________________________
consensus TGCTTATGGAACTGCTGCAATGCTGCTTGTCATGGTTTGGAAACCACACATTAGCTTTCT
. : . : . : . : . : . :
JMSF020J16- ATCCACGTCTACAATACTCAGGATCATTTTATTGGTCGAAGTTGTATGTGCTAGTTCCTT
JMSF035B19- ATCCACGTCTACAATACTCAGGATCATTTTATTGGTCGAAGTTGTATGTGCTAGTTCCTT
JMSF041F04- ATCCACGTCTACAATACTCAGGATCATTTTATTGGTCGAAGTTGTATGTGCTAGTTCCTT
rJMSF035B19+ TCAGGATCATTTTATTGTCGNAAGTTGTATGTGCTAGTTCCTT
rJMSF041F04+ ATCCACGTCTACAATACTCAGGATCATTTTATTGGTCGAAGTTGTATGTGCTAGTTCCTT
____________________________________________________________
consensus ATCCACGTCTACAATACTCAGGATCATTTTATTGGTCGAAGTTGTATGTGCTAGTTCCTT
. : . : . : . : . : . :
JMSF020J16- CATCAGTGCTTATATTGGTTATGTCTATCAGTACAATTCACTTGATTCTCAACCTGATGT
JMSF035B19- CATCAGTGCTTATATTGGTTATGTCTATCAGTACAATTCACTTGATTCTCAACCTGATGT
JMSF041F04- CATCAGTGCTTATATTGGTTATGTCTATCAGTACAATTCACTTGATTCTCAACCTGATGT
rJMSF035B19+ CATCAGTGCTTATATNGGTTATGTCTATCAGTACAATTCACTTGATTCTCAACCTGATGT
rJMSF041F04+ CATCAGTGCTTATATTGGTTATGTCTATCAGTACAATTCACTTGATTCTCAACCTGATGT
____________________________________________________________
consensus CATCAGTGCTTATATTGGTTATGTCTATCAGTACAATTCACTTGATTCTCAACCTGATGT
. : . : . : . : . : . :
JMSF020J16- TCTAAAATCACTTTATTCTCCTCTTCAACCGTCTAGTTCTTTGGAAGGNTTGAGGTA
JMSF035B19- TCTAAAATCACTTTATTCTCCTCTTCAACCGTCTAGTTCTTTGGAAGGTTTGAGGTATCA
JMSF041F04- TCTAAAATCACTTTATTCTCCTCTTCAACCGTCTAGTTCTTTGGAAGGTTTGAGGTATCA
rJMSF035B19+ TCTAAAATCACTTTATTCTCCTCTTCAACCGTCTAGTTCTTTGGAAGGTTTGAGGTATCA
rJMSF041F04+ TCTAAAATCACTTTATTCTCCTCTTCAACCGTCTAGTTCTTTGGAAGGTTTGAGGTATCA
rJMSF020J16+ AGGTATCA
____________________________________________________________
consensus TCTAAAATCACTTTATTCTCCTCTTCAACCGTCTAGTTCTTTGGAAGGTTTGAGGTATCA
. : . : . : . : . : . :
JMSF035B19- TGATGGGGGTCGACTTTCTGATCAGCAAATGGCTCTATTGCAATATCAACAAGAAAATAT
JMSF041F04- TGATGGGGGTCGACTTTCTGATCAGCAAATGGCTCTATTGCAATATCAACAAGAAAATAT
rJMSF035B19+ TGATGGGGGTCGACTTTCTGATCAGCAAATGGCTCTATTGCAATATCAACAAGAAAATAT
rJMSF041F04+ TGATGGGGGTCGACTTTCTGATCAGCAAATGGCTCTATTGCAATATCAACAAGAAAATAT
rJMSF020J16+ TGATGGGGGTCGACTTTCTGATCAGCAAATGGCTCTATTGCAATATCAACAAGAAAATAT
____________________________________________________________
consensus TGATGGGGGTCGACTTTCTGATCAGCAAATGGCTCTATTGCAATATCAACAAGAAAATAT
. : . : . : . : . : . :
JMSF035B19- TCACTTTCTGAATG
JMSF041F04- TCACTTTCTGAATGAGG
rJMSF035B19+ TCACTTTCTGAATGAGGAGATTCTTAGATTGCAAGAATGCTTAAGCAAATATGAAGGATC
rJMSF041F04+ TCACTTTCTGAATGAGGAGATTCTTAGATTGCAAGAATGCTTAAGCAAATATGAAGGATC
rJMSF020J16+ TCACTTTCTGAATGAGGAGATTCTTAGATTGCAAGAATGCTTAAGCAAATATGAAGGATC
____________________________________________________________
consensus TCACTTTCTGAATGAGGAGATTCTTAGATTGCAAGAATGCTTAAGCAAATATGAAGGATC
. : . : . : . : . : . :
rJMSF035B19+ TAATGATGGGAGTGCACCTCAGGTTGATCTTGCTCATCTATTGGCAACTAGGGATCAGGA
rJMSF041F04+ TAATGATGGGAGTGCACCTCAGGTTGATCTTGCTCATCTATTGGCAACTAGGGATCAAGA
rJMSF020J16+ TAATGATGGGAGTGCACCTCAGGTTGATCTTGCTCATCTATTGGCAACTAGGGATCAGGA
____________________________________________________________
consensus TAATGATGGGAGTGCACCTCAGGTTGATCTTGCTCATCTATTGGCAACTAGGGATCAGGA
. : . : . : . : . : . :
rJMSF035B19+ GTTGCGTACAGTTTCAGCTGAGATGAATCAAATGCAATCTGAGCTAATACTTGCTCGATC
rJMSF041F04+ GTTGCGTACAGTTTCAGCTGAGATGAATCAAATGCAATCTGAGCTAATACTTGCTCGATC
rJMSF020J16+ GTTGCGTACAGTTTCAGCTGAGATGAATCAAATGCAATCTGAGCTAATACTTGCTCGATC
____________________________________________________________
consensus GTTGCGTACAGTTTCAGCTGAGATGAATCAAATGCAATCTGAGCTAATACTTGCTCGATC
. : . : . : . : . : . :
rJMSF035B19+ TCTGATTGCCGAGAAGGATGCTGAGATTCAACGTGTACGTAATACGAACAATCAGTATGT
rJMSF041F04+ TCTGATTGCCGAGAAGGATGCTGAGATTCAACGTGTACGTAATACGAACAATCAGTATGT
rJMSF020J16+ TCTGATTGCCGAGAAGGATGCTGAGATTCAACGTGTACGTAATACGAACAATCAGTATGT
____________________________________________________________
consensus TCTGATTGCCGAGAAGGATGCTGAGATTCAACGTGTACGTAATACGAACAATCAGTATGT
. : . : . : . : . : . :
rJMSF035B19+ GGAGGAAAATGAAAGGCTTAGAGCTATTTTGGGGGAATGGAGTAGCCGGGCAGCCAAACT
rJMSF041F04+ GGAGGAAAATGAAAGGCTTAGAGCTATTTTGGGGGAATGGAGTAGCCGGGCAGCCAAACT
rJMSF020J16+ GGAGGAAAATGAAAGGCTTAGAGCTATTTTGGGGGAATGGAGTAGCCGGGCAGCCAAACT
____________________________________________________________
consensus GGAGGAAAATGAAAGGCTTAGAGCTATTTTGGGGGAATGGAGTAGCCGGGCAGCCAAACT
. : . : . : . : . : . :
rJMSF035B19+ TGAGCGTGCATTAGAGGCAGAAAGGATGTCGAACTTCGAATTGCAAAAGAAAGTTAGACT
rJMSF041F04+ TGAGCGTGCATTAGAGGCAGAAAGGATGTCGAACTTCGAATTGCAAAAGAAAGTTAGACT
rJMSF020J16+ TGAGCGTGCATTAGAGGCAGAAAGGATGTCGAACTTCGAATTGCAAAAGAAAGTTAGACT
____________________________________________________________
consensus TGAGCGTGCATTAGAGGCAGAAAGGATGTCGAACTTCGAATTGCAAAAGAAAGTTAGACT
. : . : . : . : . : . :
rJMSF035B19+ CTAAGAAGCCAAAGTCCAAACACGTGAAGGAATGTAGCAATCATAGCTTGTGTTCATACC
rJMSF041F04+ CTAAGAAGCCAAAGTCCAAACACGTGAAGGAATGTAGCAATCATAGCTTGTGTTCATACC
rJMSF020J16+ CTAAGAAGCCAAAGTCCAAACACGTGAAGGAATGTAGCAATCATAGCTTGTGTTCATACC
____________________________________________________________
consensus CTAAGAAGCCAAAGTCCAAACACGTGAAGGAATGTAGCAATCATAGCTTGTGTTCATACC
. : . : . : . : . : . :
rJMSF035B19+ ATCTTGAATTCCAGTAATGATATGTTGCTTTTGATTCTTTGTATTCTTTTCATCTTCACA
rJMSF041F04+ ATCTTGAATTCCAGTAATGATATGTTGCTTTTGATTCTTTGTATTCTTTTCATCTTCACA
rJMSF020J16+ ATCTTGAATTCCAGTAATGATATGTTGCTTTTGATTCTTTGTATTCTTTTCATCTTCACA
____________________________________________________________
consensus ATCTTGAATTCCAGTAATGATATGTTGCTTTTGATTCTTTGTATTCTTTTCATCTTCACA
. : . : . : . : . : . :
rJMSF035B19+ CTTATATCGAACTATGT
rJMSF041F04+ CTTATATCGAACTATGTTATCTGAAAAGATGATCG
rJMSF020J16+ CTTATATCGAACTATGTTATCTGAAAAGATGATCGTGATCCCACTTCACTGTTGTAGATC
____________________________________________________________
consensus CTTATATCGAACTATGTTATCTGAAAAGATGATCGTGATCCCACTTCACTGTTGTAGATC
. : . : . : . : . : . :
rJMSF020J16+ TTGTCTTCAACATAATGTCTTTACGATTCTCTTGAGCCAGGTTCCAGATTCATGCATGGT
____________________________________________________________
consensus TTGTCTTCAACATAATGTCTTTACGATTCTCTTGAGCCAGGTTCCAGATTCATGCATGGT
. : . : . : . : . : . :
rJMSF020J16+ ACATGGAATAGCAAGTTCTTAGATTGGAGCAAGTGAGTTTCCGCAAGTTTCTGAAAGGAA
____________________________________________________________
consensus ACATGGAATAGCAAGTTCTTAGATTGGAGCAAGTGAGTTTCCGCAAGTTTCTGAAAGGAA