Contig 011308:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF020F10Sequence657007864 (4)ref|XP_009794523.1|270PREDICTED: uncharacterized protein LOC104241287 [Nicotiana sylvestris]750011308 (2)ref|XP_009782781.1|9e-62PREDICTED: uncharacterized acetyltransferase At3g50280-like [Nicotiana sylvestr
JMSF038A20Sequence610011308 (2)ref|XP_009782781.1|5e-76PREDICTED: uncharacterized acetyltransferase At3g50280-like [Nicotiana sylvestr817008057 (14)ref|XP_011086719.1|302PREDICTED: uncharacterized protein LOC105168359 [Sesamum indicum]

Alignment

This contig is upended


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JMSF038A20+                                 TTCTGCTTGACTACATCCAGAAAGGGAATCTCCACGCC
                      ____________________________________________________________
consensus                                   TTCTGCTTGACTACATCCAGAAAGGGAATCTCCACGCC
 
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JMSF038A20+           ATTACTGGGAGTTCAGGTGACGGAGCTTGATGACGGGTATTTCATCGGCCTCGCCATGAA
                      ____________________________________________________________
consensus             ATTACTGGGAGTTCAGGTGACGGAGCTTGATGACGGGTATTTCATCGGCCTCGCCATGAA
 
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JMSF038A20+           TCACACTGCGGCAGACGCTTCGTCTTTCTGGCATTTCTTCAATTCTTGGTCTGAAATCTC
                      ____________________________________________________________
consensus             TCACACTGCGGCAGACGCTTCGTCTTTCTGGCATTTCTTCAATTCTTGGTCTGAAATCTC
 
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JMSF038A20+           GCGAGGTATGCCTCAGTTATCTTTACCTCCCGTTCTTGATCCATGGTTTCCAGGCAATAT
                      ____________________________________________________________
consensus             GCGAGGTATGCCTCAGTTATCTTTACCTCCCGTTCTTGATCCATGGTTTCCAGGCAATAT
 
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JMSF038A20+           CGCCCGCCCCCTTTGCCTCCCCTTTGATCTCCAGCAAGAAACGTTGTCCAGCTCCTTCAC
                      ____________________________________________________________
consensus             CGCCCGCCCCCTTTGCCTCCCCTTTGATCTCCAGCAAGAAACGTTGTCCAGCTCCTTCAC
 
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JMSF038A20+           CCCGCCGCCATTGGAGGAGAGGGTGTTCCATTTCAGCAAAGACACCATTGCAAAGCTCAA
                      ____________________________________________________________
consensus             CCCGCCGCCATTGGAGGAGAGGGTGTTCCATTTCAGCAAAGACACCATTGCAAAGCTCAA
 
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JMSF038A20+           GGAAAAAGCCAACTCTGAAATGGGAACCGACTCGATCTCCTCCCTGCAATCATATGTGGC
                      ____________________________________________________________
consensus             GGAAAAAGCCAACTCTGAAATGGGAACCGACTCGATCTCCTCCCTGCAATCATATGTGGC
 
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JMSF038A20+           TCACTTGTGGAGGGCCATCACTCGTGCCCGTCGCCTAAACCCCACCGAAGACGTGTCTAT
rJMSF020F10+                                        TCGCCTAAACCCCACCGAAGACGTGTCTAT
                      ____________________________________________________________
consensus             TCACTTGTGGAGGGCCATCACTCGTGCCCGTCGCCTAAACCCCACCGAAGACGTGTCTAT
 
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JMSF038A20+           CTACGTGCCAATAGGCACGAGATGGAGGACGAATCCGCCATTGCCAGAAGGGTATTGGGG
rJMSF020F10+          TTACGTGCCAATAGGCACGAGATGGAGGACGAATCCGCCATTGCCAGAAGGGTATTGGGG
                      ____________________________________________________________
consensus             TTACGTGCCAATAGGCACGAGATGGAGGACGAATCCGCCATTGCCAGAAGGGTATTGGGG
 
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JMSF038A20+           AAACGCGATTCACAGCAAGCTGGCAAAGGCAAATGCAGGAGAGCTGCTGAAGAGAGGATT
rJMSF020F10+          AAACGCGATTCACAGCAAGCTGGCAAAGGCAAATGCAGGAGAGCTGCTGAAGAGAGGATT
                      ____________________________________________________________
consensus             AAACGCGATTCACAGCAAGCTGGCAAAGGCAAATGCAGGAGAGCTGCTGAAGAGAGGATT
 
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JMSF038A20+           AGGCTGGGCAGCCTGGCAAATACATG                                  
rJMSF020F10+          AGGCTGGGCAGCCTGGCAAATACATGAAGTGGTGTCTATTCAGGATCATGAAGAAGTGGT
                      ____________________________________________________________
consensus             AGGCTGGGCAGCCTGGCAAATACATGAAGTGGTGTCTATTCAGGATCATGAAGAAGTGGT
 
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rJMSF020F10+          GGAGTTTTACCAGAATTGGGTGAAATCTCCTGTGATTGCCCAGAAGAGCAAAGTGTTCTT
                      ____________________________________________________________
consensus             GGAGTTTTACCAGAATTGGGTGAAATCTCCTGTGATTGCCCAGAAGAGCAAAGTGTTCTT
 
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rJMSF020F10+          TGCCAACTTTCTGGGCATTGCTAGCTCCCCAAGGAACAATGTTTATGCCACTGATTTTGG
                      ____________________________________________________________
consensus             TGCCAACTTTCTGGGCATTGCTAGCTCCCCAAGGAACAATGTTTATGCCACTGATTTTGG
 
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rJMSF020F10+          GTGGGGGAAGCCTGTAGCAGTGAGATGTGGAATGGACAATAAAGCTGATGGGAAGTTCAG
                      ____________________________________________________________
consensus             GTGGGGGAAGCCTGTAGCAGTGAGATGTGGAATGGACAATAAAGCTGATGGGAAGTTCAG
 
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rJMSF020F10+          CCTGTTTCCTGGACTGGAAAAAGGGAGTGTGGACATTGAGGTTTGCCTTCTTCCTCACAC
                      ____________________________________________________________
consensus             CCTGTTTCCTGGACTGGAAAAAGGGAGTGTGGACATTGAGGTTTGCCTTCTTCCTCACAC
 
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rJMSF020F10+          ACTACATACTTTAGGGAATGATCAAGAATTCATGGAGTTTGTTACCCATTGAGCAAAATA
                      ____________________________________________________________
consensus             ACTACATACTTTAGGGAATGATCAAGAATTCATGGAGTTTGTTACCCATTGAGCAAAATA
 
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rJMSF020F10+          AACCATATTACCCTGCTCGTGAATGCCAGCAAAGCAAAACTATTAATTTAGTTTCCGATG
                      ____________________________________________________________
consensus             AACCATATTACCCTGCTCGTGAATGCCAGCAAAGCAAAACTATTAATTTAGTTTCCGATG
 
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rJMSF020F10+          AAGCAAAACCATTAATTCTCCTCGGATTGATCAACCAGTTGAATTATACTTCGAAATTTG
                      ____________________________________________________________
consensus             AAGCAAAACCATTAATTCTCCTCGGATTGATCAACCAGTTGAATTATACTTCGAAATTTG
 
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rJMSF020F10+          TTTAATACATATGTACCAAAGATGTGTTTGGTTCATAGATGTAGAACTATGTACTTTGGG
                      ____________________________________________________________
consensus             TTTAATACATATGTACCAAAGATGTGTTTGGTTCATAGATGTAGAACTATGTACTTTGGG
 
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rJMSF020F10+          TGTGTTTGGTTCATGAGTGTAGAACTCAAAATGACAATATTTATTGTGATTGTTGCTCAT
                      ____________________________________________________________
consensus             TGTGTTTGGTTCATGAGTGTAGAACTCAAAATGACAATATTTATTGTGATTGTTGCTCAT