Contig 011307:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039C09Sequence135011307 (4)gb|KDO76472.1|9e-12hypothetical protein CISIN_1g018449mg [Citrus sinensis]
JMSF020D22Sequence691002232 (4)ref|XP_009617594.1|6e-118PREDICTED: mitochondrial adenine nucleotide transporter ADNT1-like [Nicotiana t757011307 (4)ref|XP_007209295.1|7e-85hypothetical protein PRUPE_ppa007764mg [Prunus persica] gb|EMJ10494.1| hypotheti
JMSF023D19Sequence669002232 (4)ref|XP_009617594.1|3e-76PREDICTED: mitochondrial adenine nucleotide transporter ADNT1-like [Nicotiana t692011307 (4)ref|XP_007209295.1|4e-74hypothetical protein PRUPE_ppa007764mg [Prunus persica] gb|EMJ10494.1| hypotheti
JMSF031G09Sequence670002232 (4)ref|XP_009617594.1|2e-101PREDICTED: mitochondrial adenine nucleotide transporter ADNT1-like [Nicotiana t718011307 (4)ref|XP_007209295.1|4e-89hypothetical protein PRUPE_ppa007764mg [Prunus persica] gb|EMJ10494.1| hypotheti

Alignment

This contig is upended


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rJMSF031G09+                                                                   TAG
                      ____________________________________________________________
consensus                                                                      TAG
 
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rJMSF031G09+          ANCAGTTTTGTTGAAGAAGGGCCTCGTGCTCTGTATAGAGGATGGGTTCCTTCTGTAATA
rJMSF020D22+                                CTCGTGCTCTGTATAGAGGATGGGTTCCTTCTGTAATA
                      ____________________________________________________________
consensus             ANCAGTTTTGTTGAAGAAGGGCCTCGTGCTCTGTATAGAGGATGGGTTCCTTCTGTAATA
 
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rJMSF031G09+          GGGGTGATACCATACGTAGGTCTCAATTTTTCTGTATATGAATCTTTAAAAGATTGGTTG
rJMSF023D19+            GGTGATACCATACGTAGGTCTCAATTTTTCTGTATATGAATCTTTAAAAGATTGGTTG
rJMSF020D22+          GGGGTGATACCATACGTAGGTCTCAATTTTTCTGTATATGAATCTTTAAAAGATTGGTTG
                      ____________________________________________________________
consensus             GGGGTGATACCATACGTAGGTCTCAATTTTTCTGTATATGAATCTTTAAAAGATTGGTTG
 
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rJMSF031G09+          GTCAAATCTAGACCATTTGGACTTGTTCAAGACTCTGAGTTGAGTGTTACAACGAAGCTT
rJMSF023D19+          GTCAAATCTAGACCATTTGGACTTGTTCAAGACTCTGAGTTGAGTGTTACAACGAAGCTT
rJMSF020D22+          GTCAAATCTAGACCATTTGGACTTGTTCAAGACTCTGAGTTGAGTGTTACAACGAAGCTT
                      ____________________________________________________________
consensus             GTCAAATCTAGACCATTTGGACTTGTTCAAGACTCTGAGTTGAGTGTTACAACGAAGCTT
 
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rJMSF031G09+          GCCTGTGGGGCTGCTGCCGGAACTGTTGGCCAGACAGTTGCTTATCCTCTTGATGTTGTT
rJMSF023D19+          GCCTGTGGGGCTGCTGCCGGAACTGTTGGCCAGACAGTTGCTTATCCTCTTGATGTTGTT
rJMSF020D22+          GCCTGTGGGGCTGCTGCCGGAACTGTTGGCCAGACAGTTGCTTATCCTCTTGATGTTGTT
                      ____________________________________________________________
consensus             GCCTGTGGGGCTGCTGCCGGAACTGTTGGCCAGACAGTTGCTTATCCTCTTGATGTTGTT
 
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rJMSF031G09+          CGTCGAAGAATGCAGATGGTAGGTTGGAAAGGTGCTGCTTCTGTTGTTACTGGTGATGGG
rJMSF023D19+          CGTCGAAGAATGCAGATGGTAGGTTGGAAAGGTGCTGCTTCTGTTGTTACTGGTGATCGG
rJMSF020D22+          CGTCGAAGAATGCAGATGGTAGGTTGGAAAGGTGCTGCTTCTGTTGTTACTGGTGATGGG
                      ____________________________________________________________
consensus             CGTCGAAGAATGCAGATGGTAGGTTGGAAAGGTGCTGCTTCTGTTGTTACTGGTGATGGG
 
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rJMSF031G09+          AAGAGCAAGGCACCACCACAGTATACTGGTATGGTGGATGCTTTCAGGAAAACAGTTCGT
rJMSF023D19+          AAGAGCAAGGCACCACCACAGTATACTGGTATGGTGGATGCTTTCAGGAAAACAGTTCGT
rJMSF020D22+          AAGAGCAAGGCACCACCACAGTATACTGGTATGGTGGATGCTTTCAGGAAAACAGTTCGT
                      ____________________________________________________________
consensus             AAGAGCAAGGCACCACCACAGTATACTGGTATGGTGGATGCTTTCAGGAAAACAGTTCGT
 
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rJMSF031G09+          CATGAGGGGTTTGGAGCTTTGTACAAGGGATTGGTTCCCAATTCAGTTAAGGTGGTTCCC
rJMFF039C09+                                ACAAGGGATTGGTTCCCAATTCAGTTAAGGNGGTTCCC
rJMSF023D19+          CATGAGGGGTTTGGAGCTTTGTACAAGGGATTGGTTCCCAATTCAGTTAAGGTGGTTCCC
rJMSF020D22+          CATGAGGGGTTTGGAGCTTTGTACAAGGGATTGGTTCCCAATTCAGTTAAGGTGGTTCCC
                      ____________________________________________________________
consensus             CATGAGGGGTTTGGAGCTTTGTACAAGGGATTGGTTCCCAATTCAGTTAAGGTGGTTCCC
 
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rJMSF031G09+          TCCATAGCAATTGCATTTGTGACATATGAGGTGGTCAAAGACATTCTTGGAGTGGAAATG
rJMFF039C09+          TCCATAGCAATNGCATTTGTGACATATGAGGTGGTCAAAGACATTCTTGGAGTGGAAATG
rJMSF023D19+          TCCATAGCAATTGCATTTGTGACATATGAGGTGGTCAAAGACATTCTTGGAGTGGAAATG
rJMSF020D22+          TCCATAGCAATTGCATTTGTGACATATGAGGTGGTCAAAGACATTCTTGGAGTGGAAATG
                      ____________________________________________________________
consensus             TCCATAGCAATTGCATTTGTGACATATGAGGTGGTCAAAGACATTCTTGGAGTGGAAATG
 
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rJMSF031G09+          AGGATATCTGATTGATACAATCCAAAAAGTTCAGTCTTTTGTCTGAACTTGAATTCTAAT
rJMFF039C09+          AGGANATCTGATTGATACAATCCAAAAAGTTCAGTCT                       
rJMSF023D19+          AGGATATCTGATTGATACAATCCAAAAAGTTCAGTCTTTTGTCTGAACTTGAATTCTAAT
rJMSF020D22+          AGGATATCTGATTGATACAATCCAAAAAGTTCAGTCTTTTGTCTGAATTTGAATTCTAAT
                      ____________________________________________________________
consensus             AGGATATCTGATTGATACAATCCAAAAAGTTCAGTCTTTTGTCTGAACTTGAATTCTAAT
 
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rJMSF031G09+          TTTGGTCAGAGTTGATTAGGTTAATGGGGGTTCACTATGAGGTTGTTCTTTCTTATACAT
rJMSF023D19+          TTTGGTCAGAGTTGATTAGGTTAATGGGGGTTCACTATGAGGTTGTTCTTTCTTATACAT
rJMSF020D22+          TTTGGTCAGAGTTGATTAGGTTAATGGGGGTTCACTATGAGGTTGTTCTTTCTTATACAT
                      ____________________________________________________________
consensus             TTTGGTCAGAGTTGATTAGGTTAATGGGGGTTCACTATGAGGTTGTTCTTTCTTATACAT
 
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rJMSF031G09+          GGGAAATTTGGTAAGTTTAGAGAATGTTGAGATAGCTTATATCCTATAATAGCAAACCTT
rJMSF023D19+          GGGAAATTTGGTAAGTTTAGAGAATGTTGAGATAGCTNATATCCTATAATAGCAAACCTT
rJMSF020D22+          GGGAAATTTGGTAAGTTTAGAGAATGTTGAGATAGCTTATATCCTATAATAGCAAACCTT
                      ____________________________________________________________
consensus             GGGAAATTTGGTAAGTTTAGAGAATGTTGAGATAGCTTATATCCTATAATAGCAAACCTT
 
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rJMSF031G09+          TTCTTTTGTTTTAACTTCTAAATACCAAGTACTCCTAATACTGCCAATAAGGATG     
rJMSF023D19+          TTCTTTTGTTTTAACTTCTAAATA-CAAGTACTCCTAATACTGCCAATAAGGATGTCATC
rJMSF020D22+          TTCTTTTGTTTTAACTTCTAAATA-CAAGTACTCCTAATACTGCCAATAAGGATGTCATC
                      ____________________________________________________________
consensus             TTCTTTTGTTTTAACTTCTAAATA-CAAGTACTCCTAATACTGCCAATAAGGATGTCATC
 
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rJMSF023D19+          CCACACTCTTCTTT                                              
rJMSF020D22+          CCACACTCTTCTTTTGAAACTGAAGTTAAGATTTGCCCAGAATTTTATGCAACCTGGTGT
                      ____________________________________________________________
consensus             CCACACTCTTCTTTTGAAACTGAAGTTAAGATTTGCCCAGAATTTTATGCAACCTGGTGT