Contig 011301:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF045P09+                CCCCNACCNTGGCCTTCCACCTTAAGGAAAAAAAAAAAAGGAAAACTTAGATTA
rJMSF019F14+                                           AAAAAAAAAAAAGGAAAACTTAGATTA
                      ____________________________________________________________
consensus                   CCCCNACCNTGGCCTTCCACCTTAAGGAAAAAAAAAAAAGGAAAACTTAGATTA
 
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rJMSF045P09+          ACTCAATATCAGCTAAAAGTTCAATTGCTAAGATTATTGTACTTTCTAAGACTTGACCAG
rJMSF019F14+          ACTCAATATCAGCTAAAAGTTCAATTGCTAAGATTATTGTACTTTCTAAGACTTGACCAG
                      ____________________________________________________________
consensus             ACTCAATATCAGCTAAAAGTTCAATTGCTAAGATTATTGTACTTTCTAAGACTTGACCAG
 
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rJMSF045P09+          AACATAAAATATAGGACTGTTTTGGAAAATACATACAAGAATATTTTGAATTCTAACCAA
rJMSF019F14+          AACATAAAATATAGGACTGTTTTGGAAAATACATACAAGAATATTTTGAATTCTAACCAA
                      ____________________________________________________________
consensus             AACATAAAATATAGGACTGTTTTGGAAAATACATACAAGAATATTTTGAATTCTAACCAA
 
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rJMSF045P09+          GGACTGCAAATTAAAGTCAAAGCAAAATAGGGGTATAAGGACTTCAACATTTGTTAAAAA
rJMSF019F14+          GGACTGCAAATTAAAGTCAAAGCAAAATAGGGGTATAAGGACTTCAACATTTGTTAAAAA
                      ____________________________________________________________
consensus             GGACTGCAAATTAAAGTCAAAGCAAAATAGGGGTATAAGGACTTCAACATTTGTTAAAAA
 
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rJMSF045P09+          ATTTGAGCTATAGCATGGTAGTATATGCAAATTAACCTTACAAGTCATTACACATTTTTC
rJMSF019F14+          ATTTGAGCTATAGCATGGTAGTATATGCAAATTAACCTTACAAGTCATTACACATTTTTC
                      ____________________________________________________________
consensus             ATTTGAGCTATAGCATGGTAGTATATGCAAATTAACCTTACAAGTCATTACACATTTTTC
 
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rJMSF045P09+          TATCAATATACTATTCTGACACAATGCCATGGTACNTGCTGTAGAGTTACAAAACAGAAT
rJMSF019F14+          TATCAATATACTATTCTGACACAATGCCATGGTACATGCTGTAGAGTTACAAAACAGAAT
                      ____________________________________________________________
consensus             TATCAATATACTATTCTGACACAATGCCATGGTACATGCTGTAGAGTTACAAAACAGAAT