Contig 011300:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018E13Sequence565011300 (2)ref|NP_001235585.1|8e-69uncharacterized protein LOC100527403 [Glycine max] gb|ACU16493.1| unknown [Glyci689011300 (2)ref|NP_001235585.1|4e-74uncharacterized protein LOC100527403 [Glycine max] gb|ACU16493.1| unknown [Glyci

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF018E13- AAAGCAAAATTCAATCTTATTATGTCTCT
                      ____________________________________________________________
consensus AAAGCAAAATTCAATCTTATTATGTCTCT
 
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rJMSF018E13- GATTCCGATTAGAATTCTGCAAATTATGATTGCCCAGAAACAGAATGAAATTGGATTACA
                      ____________________________________________________________
consensus GATTCCGATTAGAATTCTGCAAATTATGATTGCCCAGAAACAGAATGAAATTGGATTACA
 
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JMSF018E13+ GGCGTGTTCAGGAACAGCCATGA
rJMSF018E13- ACTTAGCAAATTTCTTGAGATTAACATCAGCATCTTTGGCGTGTTCAGGAACAGCCATGA
                      ____________________________________________________________
consensus ACTTAGCAAATTTCTTGAGATTAACATCAGCATCTTTGGCGTGTTCAGGAACAGCCATGA
 
. : . : . : . : . : . :
JMSF018E13+ CCAAGAGAGTAACCCTAGAAGAAGATATCATCACTCGTTTATCTTCGTCCGATGGGTCAA
rJMSF018E13- CCAAGAGAGTAACCCTAGAAGAAGATATCATCACTCGTTTATCTTCGTCCGATGGGTCAA
                      ____________________________________________________________
consensus CCAAGAGAGTAACCCTAGAAGAAGATATCATCACTCGTTTATCTTCGTCCGATGGGTCAA
 
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JMSF018E13+ CCTTCCAGAGCTTCACTTCCCAGACCTGAATGGTGTTCCCGACGTTGACCGGCGTGGCCT
rJMSF018E13- CCTTCCAGAGCTTCACTTCCCAGACCTGAATGGTGTTCCCGACGTTGACCGGCGTGGCCT
                      ____________________________________________________________
consensus CCTTCCAGAGCTTCACTTCCCAGACCTGAATGGTGTTCCCGACGTTGACCGGCGTGGCCT
 
. : . : . : . : . : . :
JMSF018E13+ CGGCGAGGACGAGGTCGCCGATCCGGGCACTCTTCAGATGGTGGATGCCCAGGTGGAATC
rJMSF018E13- CGGCGAGGACGAGGTCGCCGATCCGGGCACTCTTCAGATGGTGGATGCCCAGGTGGAATC
                      ____________________________________________________________
consensus CGGCGAGGACGAGGTCGCCGATCCGGGCACTCTTCAGATGGTGGATGCCCAGGTGGAATC
 
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JMSF018E13+ CGGCCACTCTCCGGAACCCGGACGCCATGTGGGCCCCCATGCTCGCCAGAGCCTCCGCTA
rJMSF018E13- CGGCCACTCTCCGGAACCCGGACGCCATGTGGGCCCCCATGCTCGCCAGAGCCTCCGCTA
                      ____________________________________________________________
consensus CGGCCACTCTCCGGAACCCGGACGCCATGTGGGCCCCCATGCTCGCCAGAGCCTCCGCTA
 
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JMSF018E13+ TCAGCGCCGAAACTCCGCCGTGCAACACCTTGAACGGCTGGCAGCACTTCTCCGTCACCG
rJMSF018E13- TCAGCGCCGAAACTCCGCCGTGCAACACCTTGAACGGCTGGCAGCACTTCTCCGTCACCG
                      ____________________________________________________________
consensus TCAGCGCCGAAACTCCGCCGTGCAACACCTTGAACGGCTGGCAGCACTTCTCCGTCACCG
 
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JMSF018E13+ GCAGCCGCCCCGTCACCTTGCTCGGCGACAGCTCGCCTATCTCGAACCCCACTGCGTGGA
rJMSF018E13- GCAGCCGCCCCGTCACCTTGCTCGGCGACAGCTCGCCTATCTCGAACCCCACTGCGTGGA
                      ____________________________________________________________
consensus GCAGCCGCCCCGTCACCTTGCTCGGCGACAGCTCGCCTATCTCGAACCCCACTGCGTGGA
 
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JMSF018E13+ GTGTCCGATCCAATGTCTCTGTCTTTGTTTTCGATGGATCCATTGATTTTCTTGAATTCT
rJMSF018E13- GTGTCCGATCCAATGTCTCTGTCTTTGTTTTCGATGGATCCATTGATTTTCTTGAATTCT
                      ____________________________________________________________
consensus GTGTCCGATCCAATGTCTCTGTCTTTGTTTTCGATGGATCCATTGATTTTCTTGAATTCT
 
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JMSF018E13+ AGTTCACAAACACACGAATTGATGTATGATTAAATCTTGATTTTTTGAGTGATCAAACTC
rJMSF018E13- AGTTCACAAACACACGAATTGATGTATGATTAAATCTTGATTTTTTGAGTGATCAAACTC
                      ____________________________________________________________
consensus AGTTCACAAACACACGAATTGATGTATGATTAAATCTTGATTTTTTGAGTGATCAAACTC
 
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JMSF018E13+ TTGTTGTTTCAGTCTTGGAAAAAAATGAAATCTTTGATCCGTGGTACTCGAATTAGGTTC
rJMSF018E13- TTGTTGTTTCAGTCTTGGAAAAAAATGAAATCTTTGATCCGTGGTACTCGAATTAGGTTC
                      ____________________________________________________________
consensus TTGTTGTTTCAGTCTTGGAAAAAAATGAAATCTTTGATCCGTGGTACTCGAATTAGGTTC