Contig 011299:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN029N11Sequence616011299 (3)ref|XP_011095181.1|270PREDICTED: uncharacterized protein LOC105174696 [Sesamum indicum]
JMSF018B17Sequence231005043 (2)770011299 (3)ref|XP_009772093.1|333PREDICTED: uncharacterized protein LOC104222551 [Nicotiana sylvestris]
JMSF032J24Sequence706005043 (2)ref|XP_009589511.1|236PREDICTED: uncharacterized protein LOC104086873 [Nicotiana tomentosiformis]663011299 (3)gb|EYU42061.1|1e-95hypothetical protein MIMGU_mgv1a006990mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFN029N11-                                                    GAATATTGGAAATGAACCA
                      ____________________________________________________________
consensus                                                      GAATATTGGAAATGAACCA
 
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JMFN029N11-           CTTGTTCTCATTGCAGCATTATGCCGTGATAAATCAAATCCTTTCGGTGACTCTAATAAG
                      ____________________________________________________________
consensus             CTTGTTCTCATTGCAGCATTATGCCGTGATAAATCAAATCCTTTCGGTGACTCTAATAAG
 
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JMFN029N11-           TGCTCTCAAGATGGAAATGCATACATCTCATTTGGTCAATGGGTTGGTGCAATTGTCCTG
                      ____________________________________________________________
consensus             TGCTCTCAAGATGGAAATGCATACATCTCATTTGGTCAATGGGTTGGTGCAATTGTCCTG
 
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JMFN029N11-           TACACCTACGTATTCAATATGCTTGCACCTCCTCCTGAAGGTACCTTTGACATTGAAGAT
                      ____________________________________________________________
consensus             TACACCTACGTATTCAATATGCTTGCACCTCCTCCTGAAGGTACCTTTGACATTGAAGAT
 
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JMFN029N11-           GGTGGCCACCTTCCAATGAAGGCTCCTAATAGAGATAGCTCCCATGCTGCTGCAAAGGAT
rJMSF018B17+                    TTCCAATGAAGGCTCCTAATAGAGATAGCTCCCATGCTGCTGCAAAGGAT
                      ____________________________________________________________
consensus             GGTGGCCACCTTCCAATGAAGGCTCCTAATAGAGATAGCTCCCATGCTGCTGCAAAGGAT
 
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JMFN029N11-           AGCTCCCCTGAGCAAATTCCATTGCTTGCACAGGAGCCTGCAGTTCCTGTGTCAACTAGT
rJMSF032J24+                                                                  TAGT
rJMSF018B17+          AGCTCCCCTGAGCAAATTCCATTGCTTGCACAGGAGCCTGCAGTTCCTGTGTCAACTAGT
                      ____________________________________________________________
consensus             AGCTCCCCTGAGCAAATTCCATTGCTTGCACAGGAGCCTGCAGTTCCTGTGTCAACTAGT
 
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JMFN029N11-           TCACAGAAAAATAAGATTAAGGAGTTCTTCAAGTTTCTGTATGAAAAATTGAAGCTCAAG
rJMSF032J24+          TCACAGAAAAATAAGATTANGGAGTTCTTCAAGNTTNTGTATGAAAAATTGAAGCTCAAG
rJMSF018B17+          TCACAGAAAAATAAGATTAAGGAGTTCTTCAAGTTTCTGTATGAAAAATTGAAGCTCAAG
                      ____________________________________________________________
consensus             TCACAGAAAAATAAGATTAAGGAGTTCTTCAAGTTTCTGTATGAAAAATTGAAGCTCAAG
 
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JMFN029N11-           CAAATCATTCAACCCCCCATAATTGCTTCGGTTCTTGCCATTTTCCTAGGATGCGTTCCA
rJMSF032J24+          CAAATCATTCAACCCCCCATAATTGCTTCGGTTCTTGCCATTTTCCTAGGATGCGTTCCA
rJMSF018B17+          CAAATCATTCAACCCCCCATAATTGCTTCGGTTCTTGCCATTTTCCTAGGATGCGTTCCA
                      ____________________________________________________________
consensus             CAAATCATTCAACCCCCCATAATTGCTTCGGTTCTTGCCATTTTCCTAGGATGCGTTCCA
 
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JMFN029N11-           TTCTTCAAGAAACTGATCTTCACTTCAGATGCTCCATTTTACTTCTTCACTGACAGCTGC
rJMSF032J24+          TTNTTCAAGAAACTGATCTTCACTTCAGATGCTCCATTTTACTTCTTCACTGACAGCTGC
rJMSF018B17+          TTCTTCAAGAAACTGATCTTCACTTCAGATGCTCCATTTTACTTCTTCACTGACAGCTGC
                      ____________________________________________________________
consensus             TTCTTCAAGAAACTGATCTTCACTTCAGATGCTCCATTTTACTTCTTCACTGACAGCTGC
 
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JMFN029N11-           ATGATTCTTGGGGAGGCCATGATTCCCTGCATATTGTTGGCATTAGGAGGCAATCTTGTT
rJMSF032J24+          ATGATTCTTGGGGAGGCCATGATTCCCTGCATATTGTTGGCATTAGGAGGCAATCTTGTT
rJMSF018B17+          ATGATTCTTGGGGAGGCCATGATTCCCTGCATATTGTTGGCATTAGGAGGCAATCTTGTT
                      ____________________________________________________________
consensus             ATGATTCTTGGGGAGGCCATGATTCCCTGCATATTGTTGGCATTAGGAGGCAATCTTGTT
 
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JMFN029N11-           CAAGGTCCAGGAAGTTC-AAACTTGGTTTACGGACAACTGCTGCAATCATATTTGGTC  
rJMSF032J24+          CAAGGTCCAGGAAGTTCAAAACTTGGTTTACGGACAACTGCTGCAATCATATTTGGTCGG
rJMSF018B17+          CAAGGTCCAGGAAGTTCAAAACTTGGTTTACGGACAACTGCTGCAATCATATTTGGTCGG
                      ____________________________________________________________
consensus             CAAGGTCCAGGAAGTTCAAAACTTGGTTTACGGACAACTGCTGCAATCATATTTGGTCGG
 
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rJMSF032J24+          CTGGTTTTAGTTCCTCCAACTGGACTTGGAATCGTCATGTTGGNTGATAAACTCGGCTTC
rJMSF018B17+          CTGGTTTTAGTTCCTCCAACTGGACTTGGAATCGTCATGTTGGCTGATAAACTCGGCTTC
                      ____________________________________________________________
consensus             CTGGTTTTAGTTCCTCCAACTGGACTTGGAATCGTCATGTTGGCTGATAAACTCGGCTTC
 
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rJMSF032J24+          CTTCCTGCCGGTGACAAGATGTTCAGATTCGTCCTCCTCCTCCAGCATACAATGCCCACA
rJMSF018B17+          CTTCCTGCCGGTGACAAGATGTTCAGATTCGTCCTCCTCCTCCAGCATACAATGCCCACA
                      ____________________________________________________________
consensus             CTTCCTGCCGGTGACAAGATGTTCAGATTCGTCCTCCTCCTCCAGCATACAATGCCCACA
 
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rJMSF032J24+          TCCGTGCTTTCCGGTGCGGTTGCAAATTTGAGAGGGTGTGGGAGGGAGGCAGCTGCTGTC
rJMSF018B17+          TCCGTGCTTTCCGGTGCGGTTGCAAATTTGAGAGGGTGTGGGAGGGAGGCAGCTGCTGTC
                      ____________________________________________________________
consensus             TCCGTGCTTTCCGGTGCGGTTGCAAATTTGAGAGGGTGTGGGAGGGAGGCAGCTGCTGTC
 
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rJMSF032J24+          CTGTTTTGGGTTCATATCTTTGCTATTTTCTCAATGGCCGGTTGGATTATCCTGTATCTC
rJMSF018B17+          CTGTTTTGGGTTCATATCTTTGCTATTTTCTCAATGGCCGGTTGGATTATCCTGTATCTC
                      ____________________________________________________________
consensus             CTGTTTTGGGTTCATATCTTTGCTATTTTCTCAATGGCCGGTTGGATTATCCTGTATCTC
 
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rJMSF032J24+          AACATATTGTTTTAAGTTTGNACGTAGTTTTGCCAGGAAAATTACCATGCCCAGTGATCA
rJMSF018B17+          AACATATTGTTTTAAGTTTGTACGTAGTTTTGCCAGGAAAATTACCATGCCCAGTGATCA
                      ____________________________________________________________
consensus             AACATATTGTTTTAAGTTTGTACGTAGTTTTGCCAGGAAAATTACCATGCCCAGTGATCA
 
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rJMSF032J24+          CTTGTTTATAGAGTAAGCATTATTGCGAGTATCGTTTTCCATAATACATACTNTGAAAT 
rJMSF018B17+          CTTGTTTATAGAGTAAGCATTATTGCGAGTATCGTTTTCCATAATACATACTTTGAAATA
                      ____________________________________________________________
consensus             CTTGTTTATAGAGTAAGCATTATTGCGAGTATCGTTTTCCATAATACATACTTTGAAATA