Contig 011298:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016A23Sequence226011965 (2)emb|CDP02742.1|7e-13unnamed protein product [Coffea canephora]746011298 (4)ref|XP_004234578.1|7e-82PREDICTED: MATE efflux family protein 9-like [Solanum lycopersicum]
JMSF017A23Sequence704011298 (4)ref|XP_004234578.1|5e-73PREDICTED: MATE efflux family protein 9-like [Solanum lycopersicum]
JMSF018A23Sequence152011965 (2)emb|CDP02742.1|3e-10unnamed protein product [Coffea canephora]714011298 (4)ref|XP_004234578.1|9e-89PREDICTED: MATE efflux family protein 9-like [Solanum lycopersicum]
JMSF044J10Sequence774010226 (3)ref|XP_004232021.1|4e-105PREDICTED: MATE efflux family protein 9-like isoform X1 [Solanum lycopersicum]752011298 (4)ref|XP_004234578.1|2e-87PREDICTED: MATE efflux family protein 9-like [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016A23+ GGTGG
rJMSF044J10+ GCATGGTTTGTCTTGAATGGTGG
rJMSF018A23+ GAGTTTGTGCGCTTGGCTATCCCCTCGACAGGCATGGTTTGTCTTGAATGGTGG
                      ____________________________________________________________
consensus GAGTTTGTGCGCTTGGCTATCCCCTCGACAGGCATGGTTTGTCTTGAATGGTGG
 
. : . : . : . : . : . :
rJMSF017A23+ TAATCCCGAACTTGAGGCTTCA
rJMSF016A23+ ACGTATGAAATAGTTATATTGCTTTCTGGACTTTTGCCTAATCCCGAACTTGAGGCTTCA
rJMSF044J10+ ACGTATGAAATAGTTATATTGCTTTCTGGACTTTTGCCTAATCCCGAACTTGAGGCTTCA
rJMSF018A23+ ACGTATGAAATAGTTATATTGCTTTCTGGACCTTTGCCTAATCCCGAACTTGAGGCTTCA
                      ____________________________________________________________
consensus ACGTATGAAATAGTTATATTGCTTTCTGGACTTTTGCCTAATCCCGAACTTGAGGCTTCA
 
. : . : . : . : . : . :
rJMSF017A23+ GTTCTCTCAATATGCCTTTTGATTGCTTCATCGCACTACTTCATCCCGTTTTCCATTGGT
rJMSF016A23+ GTTCTCTCAATATGCCTTTTGATTGCTTCATCGCACTACTTCATCCCGTTTTCCATTGGT
rJMSF044J10+ GTTCTCTCAATATGCCTTTTGATTGCTTCATCGCACTACTTCATCCCGTTTTCCATTGGT
rJMSF018A23+ GTTCTCTCAATATGCCTTTTGATTGCTTCATCGCACTACTTCATCCCGTTTTCCATTGGT
                      ____________________________________________________________
consensus GTTCTCTCAATATGCCTTTTGATTGCTTCATCGCACTACTTCATCCCGTTTTCCATTGGT
 
. : . : . : . : . : . :
rJMSF017A23+ GCTGCGGCAAGCACTCGAGTCTCGAATGAACTCGGGGCAGGAAACTCAGAGGCAGCACGA
rJMSF016A23+ GCTGCGGCAAGCACTCGAGTCTCGAATGAACTCGGGGCAGGAAACTCAGAGGCAGCACGA
rJMSF044J10+ GCTGCGGCAAGCACTCGAGTCTCGAATGAACTCGGGGCAGGAAACTCAGAGGCAGCACGA
rJMSF018A23+ GCTGCGGCAAGCACTCGAGTCTCGAATGAACTCGGGGCAGGAAACTCAGAGGCAGCACGA
                      ____________________________________________________________
consensus GCTGCGGCAAGCACTCGAGTCTCGAATGAACTCGGGGCAGGAAACTCAGAGGCAGCACGA
 
. : . : . : . : . : . :
rJMSF017A23+ ATTGCTGTTTTGGCAGTGCTGGTTCTGACACTCTTGGAGTCAGTAGTCGCGAACACAGCT
rJMSF016A23+ ATTGCTGTTTTGGCAGTGCTGGTTCTGACACTCTTGGAGTCAGTAGTCGCGAACACAGCT
rJMSF044J10+ ATTGCTGTTTTGGCAGTGCTGGTTCTGACACTCTTGGAGTCAGTAGTCGCGAACACAGCT
rJMSF018A23+ ATTGCTGTTTTGGCAGTGCTGGTTCTGACACTCTTGGAGTCAGTAGTCGCGAACACAGCT
                      ____________________________________________________________
consensus ATTGCTGTTTTGGCAGTGCTGGTTCTGACACTCTTGGAGTCAGTAGTCGCGAACACAGCT
 
. : . : . : . : . : . :
rJMSF017A23+ CTACTTTGCTCCAGCCGGGTTCTGGGATTTGCGTTCAGCAACGAAAAGGAAGTTGTGGAT
rJMSF016A23+ CTACTTTGCTCCAGCCGGGTTCTGGGATTTGCGTTCAGCAACGAAAAGGAAGTTGTGGAT
rJMSF044J10+ CTACTTTGCTCCAGCCGGGTTCTGGGATTTGCGTTCAGCAACGAAAAGGAAGTTGTGGAT
rJMSF018A23+ CTACTTTGCTCCAGCCGGGTTCTGGGATTTGCGTTCAGCAACGAAAAGGAAGTTGTGGAT
                      ____________________________________________________________
consensus CTACTTTGCTCCAGCCGGGTTCTGGGATTTGCGTTCAGCAACGAAAAGGAAGTTGTGGAT
 
. : . : . : . : . : . :
rJMSF017A23+ TACATAGGAGCAATGGTTCCTTTTGTCTGTCTGTTGGTCTTGACAGATTGCATCCAGGGA
rJMSF016A23+ TACATAGGAGCAATGGTTCCTTTTGTCTGTCTGTTGGTCTTGACAGATTGCATCCAGGGA
rJMSF044J10+ TACATAGGAGCAATGGTTCCTTTTGTCTGTCTGTTGGTCTTGACAGATTGCATCCAGGGA
rJMSF018A23+ TACATAGGAGCAATGGTTCCTTTTGTCTGTCTGTTGGTCTTGACAGATTGCATCCAGGGA
                      ____________________________________________________________
consensus TACATAGGAGCAATGGTTCCTTTTGTCTGTCTGTTGGTCTTGACAGATTGCATCCAGGGA
 
. : . : . : . : . : . :
rJMSF017A23+ GTACTCTCTGGAGTCGTGAGAGGGAACGGGAGGCAGCGTTCTGGAGCATTCATCAATCTT
rJMSF016A23+ GTACTCTCTGGAGTCGTGAGAGGGAACGGGAGGCAGCGTTCTGGAGCATTCATCAATCTT
rJMSF044J10+ GTACTCTCTGGAGTCGTGAGAGGGAACGGGAGGCAGCGTTCTGGAGCATTCATCAATCTT
rJMSF018A23+ GTACTCTCTGGAGTCGTGAGAGGGAACGGGAGGCAGCGTTCTGGAGCATTCATCAATCTT
                      ____________________________________________________________
consensus GTACTCTCTGGAGTCGTGAGAGGGAACGGGAGGCAGCGTTCTGGAGCATTCATCAATCTT
 
. : . : . : . : . : . :
rJMSF017A23+ GGATCGTTCTATTCGGTGGGATTGCCAGTGGCAATAATTCTCGGTTTTGTTGCTCACGGG
rJMSF016A23+ GGATCGTTCTATTCGGTGGGATTGCCAGTGGCAATAATTCTCGGTTTTGTTGCTCACGGG
rJMSF044J10+ GGATCGTTCTATTCGGTGGGATTGCCAGTGGCAATAATTCTCGGTTTTGTTGCTCACGGG
rJMSF018A23+ GGATCGTTCTATTCGGTGGGATTGCCAGTGGCAATAATTCTCGGTTTTGTTGCTCACGGG
                      ____________________________________________________________
consensus GGATCGTTCTATTCGGTGGGATTGCCAGTGGCAATAATTCTCGGTTTTGTTGCTCACGGG
 
. : . : . : . : . : . :
rJMSF017A23+ AATGGGAAGGGGCTCTGGATCGGACTAAATGTAGGCGCTTCAGTGCAATGTATACTGCTT
rJMSF016A23+ AATGGGAAGGGGCTCTGGATCGGACTAAATGTAGGCGCTTCAGTGCAATGTATACTGCTT
rJMSF044J10+ AATGGGAAGGGGCTCTGGATCGGACTAAATGTAGGCGCTTCAGTGCAATGTATACTGCTT
rJMSF018A23+ AATGGGAAGGGGCTCTGGATCGGACTAAATGTAGGCGCTTCAGTGCAATGTATACTGCTT
                      ____________________________________________________________
consensus AATGGGAAGGGGCTCTGGATCGGACTAAATGTAGGCGCTTCAGTGCAATGTATACTGCTT
 
. : . : . : . : . : . :
rJMSF017A23+ GCACTTATAACTTGGTTCACTGATTGGCAAAAACAGGCAGCAAGAGCTAGGGAAAGGATC
rJMSF016A23+ GCACTTATAACTTGGTTCACTGATTGGCAAAAACAGGCAGCAAGAGCTAGGGAAAGGATC
rJMSF044J10+ GCACTTATAACTTGGTTCACTGATTGGCAAAAACAGGCAGCAAGAGCTAGGGAAAGGATC
rJMSF018A23+ GCTNTNATAACTNGGNCCACNNATTGGCAAAAACAGGCCGCCAGAGNTAGGGAAAGGATC
                      ____________________________________________________________
consensus GCACTTATAACTTGGTTCACTGATTGGCAAAAACAGGCAGCAAGAGCTAGGGAAAGGATC
 
. : . : . : . : . : . :
rJMSF017A23+ TTTCAGGGAAATTGAAA
rJMSF016A23+ TTTCAGGGAAATTGAAA
rJMSF044J10+ TTTCAGGGAAATTGAAA
rJMSF018A23+ TTTCAGGGAAANCGAAACTTCTAGCGTTTCCGAGCTTTAGGTGGCNTTTGNNTAGACATT
                      ____________________________________________________________
consensus TTTCAGGGAAATTGAAACTTCTAGCGTTTCCGAGCTTTAGGTGGCNTTTGNNTAGACATT