Contig 011297:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF017P17+                                                                GGAACA
                      ____________________________________________________________
consensus                                                                   GGAACA
 
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rJMSF017P17+          CCTGTGGATGTTCTAAATAGGAGAATAAACTTTTGGATAAGCAAGGGGGTTCTTGCAGAA
                      ____________________________________________________________
consensus             CCTGTGGATGTTCTAAATAGGAGAATAAACTTTTGGATAAGCAAGGGGGTTCTTGCAGAA
 
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JMFS129A09+                                                               CTGATACT
rJMSF017P17+          TCAGTGGGACCAGATTCTAGTGATCACCTGTTTACTCTGGTGGAGGCATTGACTGATACT
                      ____________________________________________________________
consensus             TCAGTGGGACCAGATTCTAGTGATCACCTGTTTACTCTGGTGGAGGCATTGACTGATACT
 
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JMFS129A09+           GGTAAAACTGGTATTAGTAGCGGAAACTGTGATGAACTTTTGGCAGGCGAAGAAGACAGA
rJMSF017P17+          GGTAAAACTGGTATTAGTAGCGGAAACTGTGATGAACTTTTGGCAGGCGAAGAAGACAGA
                      ____________________________________________________________
consensus             GGTAAAACTGGTATTAGTAGCGGAAACTGTGATGAACTTTTGGCAGGCGAAGAAGACAGA
 
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JMFS129A09+           GAGAGATCAGTAGCCTCTGTTGAGGACCAGTTGCGGAAAGAAATGACTGTCTATGAGAAA
rJMSF017P17+          GAGAGATCAGTAGCCTCTGTTGAGGACCAGTTGCGGAAAGAAATGACTGTCTATGAGAAA
                      ____________________________________________________________
consensus             GAGAGATCAGTAGCCTCTGTTGAGGACCAGTTGCGGAAAGAAATGACTGTCTATGAGAAA
 
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JMFS129A09+           TTTATCATGGGAATGCTTACCAATTTCGGAAGCATGGCATTGGACCGCATTCATAATACC
rJMSF017P17+          TTTATCATGGGAATGCTTACCAATTTCGGAAGCATGGCATTGGACCGCATTCATAATACC
                      ____________________________________________________________
consensus             TTTATCATGGGAATGCTTACCAATTTCGGAAGCATGGCATTGGACCGCATTCATAATACC
 
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JMFS129A09+           CTAAAGATGTTTTGCATTGCTGATCCAGCATACGATAAGTCACTCCAACAGCTTCAGAGC
rJMSF017P17+          CTAAAGATGTTTTGCATTGCTGATCCAGCATACGATAAGTCACTCCAACAGCTTCAGAGC
                      ____________________________________________________________
consensus             CTAAAGATGTTTTGCATTGCTGATCCAGCATACGATAAGTCACTCCAACAGCTTCAGAGC
 
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JMFS129A09+           TTCTTATCTGGTCTCGTGGCCGAGGAGAAGTTAGAACTTAGGGATGGAATGTATTTCCTG
rJMSF017P17+          TTCTTATCTGGTCTCGTGGCCGAGGAGAAGTTAGAACTTAGGGATGGAATGTATTTCCTG
                      ____________________________________________________________
consensus             TTCTTATCTGGTCTCGTGGCCGAGGAGAAGTTAGAACTTAGGGATGGAATGTATTTCCTG
 
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JMFS129A09+           AGGAAGTGATGGAATTGTTCATTTGACATTCACTAGATTTTTAACAAAAAGTGATGATGA
rJMSF017P17+          AGGAAGTGATGGAATTGTTCATTTGACATTCACTAGATTTTTAACAAAAAGTGATGATGA
                      ____________________________________________________________
consensus             AGGAAGTGATGGAATTGTTCATTTGACATTCACTAGATTTTTAACAAAAAGTGATGATGA
 
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JMFS129A09+           TTTGGCAATGTTTTGTTAATGTCAAATCTATAGCCATCTTTCGCAAAAGTATATGGAAAG
rJMSF017P17+          TTTGGCAATGTTTTGTTAATGTCAAATCTATAGCCATCTTTCGCAAAAGTATATGGAAAG
                      ____________________________________________________________
consensus             TTTGGCAATGTTTTGTTAATGTCAAATCTATAGCCATCTTTCGCAAAAGTATATGGAAAG
 
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JMFS129A09+           CTCAATCAGTGTCAAATTAGCATCAGAAGGGTCTAAGAGCAGGTTGATGAGTCCAGGATA
rJMSF017P17+          CTCAATCAGTGTCAAATTAGCATCAGAAGGGTCTAAGAGCAGGTTGATGAGTCCAGGATA
                      ____________________________________________________________
consensus             CTCAATCAGTGTCAAATTAGCATCAGAAGGGTCTAAGAGCAGGTTGATGAGTCCAGGATA
 
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JMFS129A09+           TAATCCAACGAAGTCTGTCGGAAAACTTTAGTTATTTAAAAAAATGGTTGTTAATATGAT
rJMSF017P17+          TAATCCAACGAAGTCTGTCGGAAAACTTTAGTTATTTAAAAAAATGGTTGTTAATATGAT
                      ____________________________________________________________
consensus             TAATCCAACGAAGTCTGTCGGAAAACTTTAGTTATTTAAAAAAATGGTTGTTAATATGAT
 
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JMFS129A09+           TCAAGTGTATTTTCTTTTTAATGAAAATACTTGGTGTACTCTTATTTT            
rJMSF017P17+          TCAAGTGTATTTTCTTTTTAATGAAAATACTTGGTGTACTCTTATTTTAAACTTTCAACT
                      ____________________________________________________________
consensus             TCAAGTGTATTTTCTTTTTAATGAAAATACTTGGTGTACTCTTATTTTAAACTTTCAACT