Contig 011296:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF016O07+                TCTTTGGGTTTAGTGCTGATGAAANTGTTAGTACAGCTCAGTATGTGGAGATTA
                      ____________________________________________________________
consensus                   TCTTTGGGTTTAGTGCTGATGAAANTGTTAGTACAGCTCAGTATGTGGAGATTA
 
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rJMSF002O10+                                                                     C
rJMSF016O07+          CTGATGTCTTAGATGACTCATTTAGTATGACACCCTTTACCTCTGATAAGTCTCAAGAAC
                      ____________________________________________________________
consensus             CTGATGTCTTAGATGACTCATTTAGTATGACACCCTTTACCTCTGATAAGTCTCAAGAAC
 
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rJMSF002O10+          AGGAAAATATACAGATTGTGTCAGCAGATAAAAGGACAAAAGCAGAGAAAGCCAACAAAA
rJMSF016O07+          AGGAAAATATACAGATTGTGTCAGCAGATAAAAGGACAAAAGCAGAGAAAGCCAACAAAA
                      ____________________________________________________________
consensus             AGGAAAATATACAGATTGTGTCAGCAGATAAAAGGACAAAAGCAGAGAAAGCCAACAAAA
 
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rJMSF002O10+          ACATGTTGAGTCCACAATATTGTAAATCAGGCTCAAACCATGCTGCTGATGTTCCAGACA
rJMSF016O07+          ACATGTTGAGTCCACAATATTGTAAATCAGGCTCAAACCATGCTGCTGATGTTCCAGACA
                      ____________________________________________________________
consensus             ACATGTTGAGTCCACAATATTGTAAATCAGGCTCAAACCATGCTGCTGATGTTCCAGACA
 
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rJMSF002O10+          GCAACAAGACAGATAATTGTTCAAAGAAGAATCATGGAAATGCATTTGGAGCAAGTCCTG
rJMSF016O07+          GCAACAAGACAGATAATTGTTCAAAGAAGAATCATGGAAATGCATTTGGAGCAAGTCCTG
                      ____________________________________________________________
consensus             GCAACAAGACAGATAATTGTTCAAAGAAGAATCATGGAAATGCATTTGGAGCAAGTCCTG
 
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rJMSF002O10+          GTGTGAGCGATGATGAAGATATTTTCTCTAAGATGGGAAATTCCAGACATGGCAGGAAAC
rJMSF016O07+          GTGTGAGCGATGATGAAGATATTTTCTCTAAGATGGGAAATTCCAGACATGGCAGGAAAC
                      ____________________________________________________________
consensus             GTGTGAGCGATGATGAAGATATTTTCTCTAAGATGGGAAATTCCAGACATGGCAGGAAAC
 
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rJMSF002O10+          ATCACTTTGGTTTGTCTAGCTCTGATGCAGAGATCGAGTACAGAAGAGGAAGAAGTTGGA
rJMSF016O07+          ATCACTTTGGTTTGTCTAGCTCTGATGCAGAGATCGAGTACAGAAGAGGAAGAAGTTGGA
                      ____________________________________________________________
consensus             ATCACTTTGGTTTGTCTAGCTCTGATGCAGAGATCGAGTACAGAAGAGGAAGAAGTTGGA
 
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rJMSF002O10+          GAGAAGGCAAAGGCAGTGGCGCATGGCGGGGGTAATCTGGGCAAGAAGCATCATTGTTGC
rJMSF016O07+          GAGAAGGCAAAGGCAGTGGCGCATGGCGGGGGTAATCTGGGCAAGAAGCATCATTGTTGC
                      ____________________________________________________________
consensus             GAGAAGGCAAAGGCAGTGGCGCATGGCGGGGGTAATCTGGGCAAGAAGCATCATTGTTGC
 
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rJMSF002O10+          TTTCGTTTTTGCAGGGTTGAGCCTCTTTGGTCTAACCTCCTCCTCTGCACTTGCTGAGTT
rJMSF016O07+          TTTCGTTTTTGCAGGGTTGAGCCTCTTTGGTCTAACCTCCTCCTCTGCACTTGCTGAGTT
                      ____________________________________________________________
consensus             TTTCGTTTTTGCAGGGTTGAGCCTCTTTGGTCTAACCTCCTCCTCTGCACTTGCTGAGTT
 
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rJMSF002O10+          CCTTGGTGTTTTGATCAACTTATGTGAGGAATGTGTTTTTGTCTGTTTGTTTGAAGTTGT
rJMSF016O07+          CCTTGGTGTTTTGATCAACTTATGTGAGGAATGTGTTTTTGTCTGTTTGTTTGAAGTTGT
                      ____________________________________________________________
consensus             CCTTGGTGTTTTGATCAACTTATGTGAGGAATGTGTTTTTGTCTGTTTGTTTGAAGTTGT
 
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rJMSF002O10+          TTCCAAAGCATATGACAAGTGCAATTGTATAATATACTACTACTATGTGTATGTGGGAAT
rJMSF016O07+          TTCCAAAGCATATGACAAGTGCAATTGTATAATATACTACTACTATGTGTATGTGGGAAT
                      ____________________________________________________________
consensus             TTCCAAAGCATATGACAAGTGCAATTGTATAATATACTACTACTATGTGTATGTGGGAAT
 
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rJMSF002O10+          TATTAATTTAATTAGGAGTGAAATGGAGGTCTGAGCTTTGGTAAAGCCCATTGTCTATTT
rJMSF016O07+          TATTAATTTAATTAGGAGTGAAATGGAGGTCTGAGCTTTGGTAAAGCCCATTGTCTATTT
                      ____________________________________________________________
consensus             TATTAATTTAATTAGGAGTGAAATGGAGGTCTGAGCTTTGGTAAAGCCCATTGTCTATTT
 
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rJMSF002O10+          GCATTTGCCATTTGGTGAGGAGTCTCATTGGCAATTGGCATGAATGCCTTGCTAGTCTTA
rJMSF016O07+          GCATTTGCCATTTGGTGAGGAGTCTCATTGGCAATTGGCATGAATGCCTTGCTAGTCTTA
                      ____________________________________________________________
consensus             GCATTTGCCATTTGGTGAGGAGTCTCATTGGCAATTGGCATGAATGCCTTGCTAGTCTTA
 
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rJMSF002O10+          GTCTTGTGTAGTAGTTGTGTCTTCTTGTTTCTGCAACTCAAACTGCTTCCTGCCTGCCT 
rJMSF016O07+          GTCTTGTGTAGTAGTTGTGTCTTCTTGTTTCTGCAACTCAAACTGCTTCCTGCCTGCCTA
                      ____________________________________________________________
consensus             GTCTTGTGTAGTAGTTGTGTCTTCTTGTTTCTGCAACTCAAACTGCTTCCTGCCTGCCTA