Contig 011295:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009A15Sequence635011295 (3)ref|XP_009613438.1|111PREDICTED: uncharacterized protein LOC104106572 [Nicotiana tomentosiformis]
JMSF016N19Sequence471000695 (2)ref|XP_010325042.1|181PREDICTED: uncharacterized protein LOC101261644 [Solanum lycopersicum]751011295 (3)ref|XP_009613438.1|122PREDICTED: uncharacterized protein LOC104106572 [Nicotiana tomentosiformis]
JMSF031D14Sequence665000695 (2)ref|XP_009613438.1|263PREDICTED: uncharacterized protein LOC104106572 [Nicotiana tomentosiformis]770011295 (3)ref|XP_009613438.1|140PREDICTED: uncharacterized protein LOC104106572 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF031D14+                                                       AAAAGATTTAGCTCT
                      ____________________________________________________________
consensus                                                          AAAAGATTTAGCTCT
 
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rJMSF031D14+          AGTATGGACACNTGTTGCTGATGTTGCCATACATTTTGCTAGGGACATGAGAGATGAATC
rJMSF016N19+                                            TTTGCTAGGGACATGAGAGATGAATC
                      ____________________________________________________________
consensus             AGTATGGACACNTGTTGCTGATGTTGCCATACATTTTGCTAGGGACATGAGAGATGAATC
 
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rJMSF031D14+          AAGGGCCGAATCTTATGTTACTGCTTTCTCTGAATCTCATCTACCGCCTCAATTAATTAA
JMFN009A15-              GGCCGAATCTTATGTTACTGCTTTCTCTGAATCTCATCTACCGCCTCAATTAATTAA
rJMSF016N19+          AAGGGCCGAATCTTATGTTACTGCTTTCTCTGAATCTCATCTACCGCCTCAATTAATTAA
                      ____________________________________________________________
consensus             AAGGGCCGAATCTTATGTTACTGCTTTCTCTGAATCTCATCTACCGCCTCAATTAATTAA
 
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rJMSF031D14+          ATGGGTTACTGACCAAGTATACACAGAACAGAACTCAAGTTTACCAAAATTTCCCATGCC
JMFN009A15-           ATGGGTTACTGACCAAGTATACACAGAACAGAACTCAAGTTTACCAAAATTTCCCATGCC
rJMSF016N19+          ATGGGTTACTGACCAAGTATACACAGAACAGAACTCAAGTTTACCAAAATTTCCCATGCC
                      ____________________________________________________________
consensus             ATGGGTTACTGACCAAGTATACACAGAACAGAACTCAAGTTTACCAAAATTTCCCATGCC
 
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rJMSF031D14+          AAAAGCTCTTATCAAGTGGTTATTACTCATTGAGGATAAAGGGCATCTAGTCTTCAGTGA
JMFN009A15-           AAAAGCTCTTATCAAGTGGTTATTACTCATTGAGGATAAAGGGCATCTAGTCTTCAGTGA
rJMSF016N19+          AAAAGCTCTTATCAAGTGGTTATTACTCATTGAGGATAAAGGGCATCTAGTCTTCAGTGA
                      ____________________________________________________________
consensus             AAAAGCTCTTATCAAGTGGTTATTACTCATTGAGGATAAAGGGCATCTAGTCTTCAGTGA
 
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rJMSF031D14+          GAATGAATTGAAGAGACATGCCAGAGCAGCAATTTGCAAGCCAATGATGGTGCATGGGAA
JMFN009A15-           GAATGAATTGAAGAGACATGCCAGAGCAGCAATTTGCAAGCCAATGATGGTGCATGGGAA
rJMSF016N19+          GAATGAATTGAAGAGACATGCCAGAGCAGCAATTTGCAAGCCAATGATGGTGCATGGGAA
                      ____________________________________________________________
consensus             GAATGAATTGAAGAGACATGCCAGAGCAGCAATTTGCAAGCCAATGATGGTGCATGGGAA
 
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rJMSF031D14+          TCCAGAATGCAAATCGGACTCTGAATACTCTACAGAGAACCTTTGTGGTAAGGAGCCAAG
JMFN009A15-           TCCAGAATGCAAATCGGACTCTGAATACTCTACAGAGAACCTTTGTGGTAAGGAGCCAAG
rJMSF016N19+          TCCAGAATGCAAATCGGACTCTGAATACTCTACAGAGAACCTTTGTGGTAAGGAGCCAAG
                      ____________________________________________________________
consensus             TCCAGAATGCAAATCGGACTCTGAATACTCTACAGAGAACCTTTGTGGTAAGGAGCCAAG
 
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rJMSF031D14+          GCAAAGCCAAGCCAGTGGGGATGAAGAGATGGTTGACCCGTTGGACAATTCATTTCCGGG
JMFN009A15-           GCAAAGCCAAGCCAGTGGGGATGAAGAGATGGTTGACCCGTTGGACAATTCATTTCCGGG
rJMSF016N19+          GCAAAGCCAAGCCAGTGGGGATGAAGAGATGGTTGACCCGTTGGACAATTCATTTCCGGG
                      ____________________________________________________________
consensus             GCAAAGCCAAGCCAGTGGGGATGAAGAGATGGTTGACCCGTTGGACAATTCATTTCCGGG
 
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rJMSF031D14+          TGCAACCTTTTGCCTTGAAATTAAGGACAACTAATGGGGGCAGAAAACACAAAAGAGAGG
JMFN009A15-           TGCAACCTTTTGCCTTGAAATTAAGGACAACTAATGGGGGCAGAAAACACAAAAGAGAGG
rJMSF016N19+          TGCAACCTTTTGCCTTGAAATTAAGGACAACTAATGGGGGCAGAAAACACAAAAGAGAGG
                      ____________________________________________________________
consensus             TGCAACCTTTTGCCTTGAAATTAAGGACAACTAATGGGGGCAGAAAACACAAAAGAGAGG
 
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rJMSF031D14+          TGAGCGATGTAAGAGAAAGGCGGCTCAAGCTTGTCAAGTATAATGTCTATGAAACCTCAA
JMFN009A15-           TGAGCGATGTAAGAGAAAGGCGGCTCAAGCTTGTCAAGTATAATGTCTATGAAACCTCAA
rJMSF016N19+          TGAGCGATGTAAGAGAAAGGCGGCTCAAGCTTGTCAAGTATAATGTCTATGAAACCTCAA
                      ____________________________________________________________
consensus             TGAGCGATGTAAGAGAAAGGCGGCTCAAGCTTGTCAAGTATAATGTCTATGAAACCTCAA
 
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rJMSF031D14+          ATGGTGAGAGACTATTGCCTTTCTCTGATGAAGATATGGAAGTTATGGGATGATAAGATG
JMFN009A15-           ATGGTGAGAGACTATTGCCTTTCTCTGATGAAGATATGGAAGTTATAGGATGATAAGATG
rJMSF016N19+          ATGGTGAGAGACTATTGCCTTTCTCTGATGAAGATATGGAAGTTATGGGATGATAAGATG
                      ____________________________________________________________
consensus             ATGGTGAGAGACTATTGCCTTTCTCTGATGAAGATATGGAAGTTATGGGATGATAAGATG
 
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rJMSF031D14+          CATACCATTAACCATTTTGTTGTGTATCCGAAGCACCAAAGTAAGTGCAAATCATAGCAT
JMFN009A15-           CATACCATTAACCATTTTGTTGTGTATCCGAAGCACCAAAGTAAGTGCAAATCATAGCAT
rJMSF016N19+          CATACCATTAACCATTTTGTTGTGTATCCGAAGCACCAAAGTAAGTGCAAATCATAGCAT
                      ____________________________________________________________
consensus             CATACCATTAACCATTTTGTTGTGTATCCGAAGCACCAAAGTAAGTGCAAATCATAGCAT
 
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rJMSF031D14+          TAGAAGGTTAATGTAGTTCTCTCTTAATTGGAGTATAGGTGCATATTTGTAAGCACTCAA
JMFN009A15-           TAGAAGGTTAATGTAGTTCTCTCTTAATTGGAGTATAG                      
rJMSF016N19+          TAGAAGGTTAATGTAGTTCTCTCTTAATTGGAGTATAGGTGCATATTTGTAAGCACTCAA
                      ____________________________________________________________
consensus             TAGAAGGTTAATGTAGTTCTCTCTTAATTGGAGTATAGGTGCATATTTGTAAGCACTCAA
 
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rJMSF031D14+          AAATCAGGATGTAGAATGTATGTTTTAGAATAACT                         
rJMSF016N19+          AAATCAGGATGTAGAATGTATGTTTTAGAATAACTTGTACTTCAGTTCATGTAATAATAA
                      ____________________________________________________________
consensus             AAATCAGGATGTAGAATGTATGTTTTAGAATAACTTGTACTTCAGTTCATGTAATAATAA