Contig 011293:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF015P05+                                                                     T
                      ____________________________________________________________
consensus                                                                        T
 
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rJMFF015P05+          GGAAACGTACTCCAGAGTTACAAGATTCTTCTTTATTTGTAATTACATCAGCAGGATCAT
rJMSF016J13+                                                GTAATTACATCAGCAGGATCAT
                      ____________________________________________________________
consensus             GGAAACGTACTCCAGAGTTACAAGATTCTTCTTTATTTGTAATTACATCAGCAGGATCAT
 
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rJMFF015P05+          AGAGCCACTTACTTCTAGATGTGCCAAATTTAGATTCAAGCCACTTACAGAAGAAATTAT
rJMSF016J13+          AGAGCCACTTACTTCTAGATGTGCCAAATTTAGATTCAAGCCACTTACAGAAGAAATTAT
                      ____________________________________________________________
consensus             AGAGCCACTTACTTCTAGATGTGCCAAATTTAGATTCAAGCCACTTACAGAAGAAATTAT
 
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rJMFF015P05+          GAGCAGCCGCATACTACACATTTGCAATGAGGAAGGTCTTAACTTGGACTCAGAGGCTCT
rJMSF016J13+          GAGCAGCCGCATACTACACATTTGCAATGAGGAAGGTCTTAACTTGGACTCAGAGGCTCT
                      ____________________________________________________________
consensus             GAGCAGCCGCATACTACACATTTGCAATGAGGAAGGTCTTAACTTGGACTCAGAGGCTCT
 
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rJMFF015P05+          TTCAACCCTCAGTACTATCTCTCAAGGTGATCTACGTAGGGGTATAACATACTTACAAAG
rJMSF016J13+          TTCAACCCTCAGTACTATCTCTCAAGGTGATCTACGTAGGGGTATAACATACTTACAAAG
                      ____________________________________________________________
consensus             TTCAACCCTCAGTACTATCTCTCAAGGTGATCTACGTAGGGGTATAACATACTTACAAAG
 
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rJMFF015P05+          TGCTGCTCGCTTGTTTGGATCATCTATTTCATCCAGGGATTTGATAACTGTTTCTGGGGT
rJMSF016J13+          TGCTGCTCGCTTGTTTGGATCATCTATTTCATCCAGGGATTTGATAACTGTTTCTGGGGT
                      ____________________________________________________________
consensus             TGCTGCTCGCTTGTTTGGATCATCTATTTCATCCAGGGATTTGATAACTGTTTCTGGGGT
 
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rJMFF015P05+          AATCCCAGAGGAAGTTGTTCATGCAATATTTTCAGCTTGTAAAAGTGGCAACTTTGACTT
rJMSF016J13+          AATCCCAGAGGAAGTTGTTCATGCAATATTTTCAGCTTGTAAAAGTGGCAACTTTGACTT
                      ____________________________________________________________
consensus             AATCCCAGAGGAAGTTGTTCATGCAATATTTTCAGCTTGTAAAAGTGGCAACTTTGACTT
 
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rJMFF015P05+          AGCAGACAAAGAAGTGAATAATGTAATAGCAGAAGGATATCCAGCTTCTCAGATGCTTTC
rJMSF016J13+          AGCAGACAAAGAAGTGAATAATGTAATAGCAGAAGGATATCCAGCTTCTCAGATGCTTTC
                      ____________________________________________________________
consensus             AGCAGACAAAGAAGTGAATAATGTAATAGCAGAAGGATATCCAGCTTCTCAGATGCTTTC
 
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rJMFF015P05+          CCAGCTATATGATTTAGTTGTTGAAGCAGATGACATATCTGATGAACAGAAAGCAAGAAT
rJMSF016J13+          CCAGCTATATGATTTAGTTGTTGAAGCAGATGACATATCTGATGAACAGAAAGCAAGAAT
                      ____________________________________________________________
consensus             CCAGCTATATGATTTAGTTGTTGAAGCAGATGACATATCTGATGAACAGAAAGCAAGAAT
 
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rJMFF015P05+          ATGCAAGAAATTGGGAGAAACAGATAAGTTTCTTGTAGATGGAGCAGATGAATATTTGCA
rJMSF016J13+          ATGCAAGAAATTGGGAGAAACAGATAAGTTTCTTGTAGATGGAGCAGATGAATATTTGCA
                      ____________________________________________________________
consensus             ATGCAAGAAATTGGGAGAAACAGATAAGTTTCTTGTAGATGGAGCAGATGAATATTTGCA
 
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rJMFF015P05+          GCTTTTGGATGTTGCAAGCATCACTATGCAAACACTTTGCAACATGCCGCAGGAAATGAC
rJMSF016J13+          GCTTTTGGATGTTGCAAGCATCACTATGCAAACACTTTGCAACATGCCGCAGGAAATGAC
                      ____________________________________________________________
consensus             GCTTTTGGATGTTGCAAGCATCACTATGCAAACACTTTGCAACATGCCGCAGGAAATGAC
 
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rJMFF015P05+          CTACTAGAGTAGGATGGCTAGGGTTATGATAGTGGTTCATGTCAATTAGATGTTGTAAAT
rJMSF016J13+          CTACTAGAGTAGGATGGCTAGGGTTATGATAGTGGTTCATGTCAATTAGATGTTGTAAAT
                      ____________________________________________________________
consensus             CTACTAGAGTAGGATGGCTAGGGTTATGATAGTGGTTCATGTCAATTAGATGTTGTAAAT
 
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rJMFF015P05+          TAACACTTGGTCTGTTTTGTTTGTGAAAGTATTGTGTGACGTGTTCTTGAATGCTTTAAT
rJMSF016J13+          TAACACTTGGTCTGTTTTGTTTGTGAAAGTATTGTGTGACGTGTTCTTGAATGCTTTAAT
                      ____________________________________________________________
consensus             TAACACTTGGTCTGTTTTGTTTGTGAAAGTATTGTGTGACGTGTTCTTGAATGCTTTAAT
 
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rJMFF015P05+          TAGAGTGTTTTTATGCAAGTAGATGTAAGATGTTTTTGCCCTGAC               
rJMSF016J13+          TAGAGTGTTTTTATGCAAGTAGATGTAAGATGTTTTTGCCCTGACCATGAGACTAGATGT
                      ____________________________________________________________
consensus             TAGAGTGTTTTTATGCAAGTAGATGTAAGATGTTTTTGCCCTGACCATGAGACTAGATGT