clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF001H17 | Sequence | 385 | 002041 (6) | ref|XP_011093033.1| | 5e-18 | PREDICTED: dynamin-related protein 5A-like [Sesamum indicum] | 730 | 011290 (4) | ref|XP_006339704.1| | 9e-104 | PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum] |
JMSF011I18 | Sequence | 378 | 002041 (6) | gb|EPS62179.1| | 2e-33 | phragmoplastin, partial [Genlisea aurea] | 754 | 011290 (4) | ref|XP_006339704.1| | 1e-109 | PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum] |
JMSF016C22 | Sequence | 255 | 002041 (6) | ref|XP_002456150.1| | 1e-12 | hypothetical protein SORBIDRAFT_03g031260 [Sorghum bicolor] gb|EES01270.1| hypot | 786 | 011290 (4) | ref|XP_006339704.1| | 2e-106 | PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum] |
JMSF036C15 | Sequence | 683 | 002041 (6) | ref|XP_009621910.1| | 3e-119 | PREDICTED: dynamin-related protein 12A-like [Nicotiana tomentosiformis] | 786 | 011290 (4) | ref|XP_006339704.1| | 2e-107 | PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF016C22+ GATGCA
____________________________________________________________
consensus GATGCA
. : . : . : . : . : . :
rJMSF001H17+ GTTCATGGTATACTGANGGATCTGGTTCACAAGTCAATAAGTGAAACTATGGAGTTGAAG
rJMSF011I18+ TACTGAAGGATCTGGTTCACAAGTCAATAAGTGAAACTATGGAGTTGAAG
rJMSF036C15+ TACTGAAGGATCTGGTTCACAAGTCAATAAGTGAAACTATGGAGTTGAAG
rJMSF016C22+ GTTCATGGTATACTGAAGGATCTGGTTCACAAGTCAATAAGTGAAACTATGGAGTTGAAG
____________________________________________________________
consensus GTTCATGGTATACTGAAGGATCTGGTTCACAAGTCAATAAGTGAAACTATGGAGTTGAAG
. : . : . : . : . : . :
rJMSF001H17+ CAGTACCCTTCTCTTAGAGTGGAGGTCAGTAATGCGGCTGTTGAATCATTAGAAAGAATG
rJMSF011I18+ CAGTACCCTTCTCTTAGAGTGGAGGTCAGTAATGCGGCTGTTGAATCATTAGAAAGAATG
rJMSF036C15+ CAGTACCCTTCTCTTAGAGTGGAGGTCAGTAATGCGGCTGTTGAATCATTAGAAAGAATG
rJMSF016C22+ CAGTACCCTTCTCNTAGAGTGGAGGTCAGTAATGCGGCTGTTGAATCATTAGAAAGAATG
____________________________________________________________
consensus CAGTACCCTTCTCTTAGAGTGGAGGTCAGTAATGCGGCTGTTGAATCATTAGAAAGAATG
. : . : . : . : . : . :
rJMSF001H17+ AGGGATGAAAGCAAGAAAGCAACTCTACAGCTTGTTGAAATGGAGTGCAGTTACCTGACT
rJMSF011I18+ AGGGATGAAAGCAAGAAAGCAACTCTACAGCTTGTTGAAATGGAGTGCAGTTACCTGACT
rJMSF036C15+ AGGGATGAAAGCAAGAAAGCAACTCTACAGCTTGTTGAAATGGAGTGCAGTTACCTGACT
rJMSF016C22+ AGGGATGAAAGCAAGAAAGCAACTCTACAGCTTGTTGAAATGGAGTGCAGTTACCTGACT
____________________________________________________________
consensus AGGGATGAAAGCAAGAAAGCAACTCTACAGCTTGTTGAAATGGAGTGCAGTTACCTGACT
. : . : . : . : . : . :
rJMSF001H17+ GTAGATNTCTTCCGAAAGCTTCCTCAAGATATTGAGAAGGGTGGAAATCCAACCCATTCA
rJMSF011I18+ GTAGATTTCTTCCGAAAGCTTCCTCAAGATATTGAGAAGGGTGGAAATCCAACCCATTCA
rJMSF036C15+ GTAGATTTCTTCCGAAAGCTTCCTCAAGATATTGAGAAGGGTGGAAATCCAACCCATTCA
rJMSF016C22+ GTAGATTTCTTCCGAAAGCTTCCTCAAGATATTGAGAAGGGTGGAAATCCAACCCATTCA
____________________________________________________________
consensus GTAGATTTCTTCCGAAAGCTTCCTCAAGATATTGAGAAGGGTGGAAATCCAACCCATTCA
. : . : . : . : . : . :
rJMSF001H17+ ATTTTTGATAGATACAACGACTCCTATCTCCGGAGAATTGGATCAAATGTTTTGTCTTAT
rJMSF011I18+ ATTTTTGATAGATACAACGACTCCTATCTCCGGAGAATTGGATCAAATGTTTTGTCTTAT
rJMSF036C15+ ATTTTTGATAGATACAACGACTCCTATCTCCGGAGAATTGGATCAAATGTTTTGTCTTAT
rJMSF016C22+ ATTTTTGATAGATACAACGACTCCTATCTCCGGAGAATTGGATCAAATGTTTTGTCTTAT
____________________________________________________________
consensus ATTTTTGATAGATACAACGACTCCTATCTCCGGAGAATTGGATCAAATGTTTTGTCTTAT
. : . : . : . : . : . :
rJMSF001H17+ GTCAATATGGTTTGTGCAAGTTTGAGGAATTCCATTCCGAAGTCTATTGTTTATTGTCAA
rJMSF011I18+ GTCAATATGGTTTGTGCAAGTTTGAGGAATTCCATTCCGAAGTCTATTGTTTATTGTCAA
rJMSF036C15+ GTCAATATGGTTTGTGCAAGTTTGAGGAATTCCATTCCGAAGTCTATTGTTTATTGTCAA
rJMSF016C22+ GTCAATATGGTTTGTGCAAGTTTGAGGAATTCCATTCCGAAGTCTATTGTTTATTGTCAA
____________________________________________________________
consensus GTCAATATGGTTTGTGCAAGTTTGAGGAATTCCATTCCGAAGTCTATTGTTTATTGTCAA
. : . : . : . : . : . :
rJMSF001H17+ GTACGAGAGGCCAAACGCAGTTTGCTTGATCATTTCTTCGCTGATTTAGGCAAAAAGGAG
rJMSF011I18+ GTACGAGAGGCCAAACGCAGTTTGCTTGATCATTTCTTCGCTGATTTAGGCAAAAAGGAG
rJMSF036C15+ GTACGAGAGGCCAAACGCAGTTTGCTTGATCATTTCTTCGCTGATTTAGGCAAAAAGGAG
rJMSF016C22+ GTACGAGAGGCCAAACGCAGTTTGCTTGATCATTTCTTCGCTGATTTAGGCAAAAAGGAG
____________________________________________________________
consensus GTACGAGAGGCCAAACGCAGTTTGCTTGATCATTTCTTCGCTGATTTAGGCAAAAAGGAG
. : . : . : . : . : . :
rJMSF001H17+ GGTAAACAACTAGGTAAACTTTTGGATGAGGATCCAGCGGTTATGCAGAGACGTATCTCT
rJMSF011I18+ GGTAAACAACTAGGTAAACTTTTGGATGAGGATCCAGCGGTTATGCAGAGACGTATCTCT
rJMSF036C15+ GGTAAACAACTAGGTAAACTTTTGGATGAGGATCCAGCGGTTATGCAGAGACGTATCTCT
rJMSF016C22+ GGTAAACAACTAGGTAAACTTTTGGATGAGGATCCAGCGGTTATGCAGAGACGTATCTCT
____________________________________________________________
consensus GGTAAACAACTAGGTAAACTTTTGGATGAGGATCCAGCGGTTATGCAGAGACGTATCTCT
. : . : . : . : . : . :
rJMSF001H17+ TTGGGAAAGAGATTGGAGCTGTACAGAGCTGCTCAAGCAGAGATTGATTCCGTCGCATGG
rJMSF011I18+ TTGGGAAAGAGATTGGAGCTGTACAGAGCTGCTCAAGCAGAGATTGATTCCGTCGCATGG
rJMSF036C15+ TTGGGAAAGAGATTGGAGCTGTACAGAGCTGCTCAAGCAGAGATTGATTCCGTCGCATGG
rJMSF016C22+ TTGGGAAAGAGATTGGAGCTGTACAGAGCTGCTCAAGCAGAGATTGATTCCGTCGCATGG
____________________________________________________________
consensus TTGGGAAAGAGATTGGAGCTGTACAGAGCTGCTCAAGCAGAGATTGATTCCGTCGCATGG
. : . : . : . : . : . :
rJMSF001H17+ TCAAAATAAACATGAACTCTTCTTATCTCAAGCAGAGATTGATTCTATTTGTTGGGATTG
rJMSF011I18+ TCAAAATAAACATGAACTCTTCTTATCTCAAGCAGAGATTGATTCTATTTGTTGGGATTG
rJMSF036C15+ TCAAAATAAACATGAACTCTTCTTATCTCAAGCAGAGATTGATTCTATTTGTTGGGATTG
rJMSF016C22+ TCAAAATAAACATGAACTCTTCTTATCTCAAGCAGAGATTGATTCTATTTGTTGGGATTG
____________________________________________________________
consensus TCAAAATAAACATGAACTCTTCTTATCTCAAGCAGAGATTGATTCTATTTGTTGGGATTG
. : . : . : . : . : . :
rJMSF001H17+ GGATAGTGTTAAGAGACGTTTGATTCTTTGCCTCGACATCTTGTCTTCCTTAAGCAGCTA
rJMSF011I18+ GGATAGTGTTAAGAGACGTTTGATTCTTTGCCTCGACATCTTGTCTTCCTTAAGCAGCTA
rJMSF036C15+ GGATAGTGTTAAGAGACGTTTGATTCTTTGCCTCGACATCTTGTCTTCCTTAAGCAGCTA
rJMSF016C22+ GGATAGTGTTAAGAGACGTTTGATTCTTTGCCTCGACATCTTGTCTTCCTTAAGCAGCTA
____________________________________________________________
consensus GGATAGTGTTAAGAGACGTTTGATTCTTTGCCTCGACATCTTGTCTTCCTTAAGCAGCTA
. : . : . : . : . : . :
rJMSF001H17+ TCTCACTATCTGCTGACGATTTTCCAGTGCTAAAAAGTAAAAAC
rJMSF011I18+ TCTCACTATCTGCTGACGATTTTCCAGTGCTAAAAAGTAAAAAC
rJMSF036C15+ TCTCACTATCTGCTGACGATTTTCCAGTGCTAAAAAGTAAAAAC
rJMSF016C22+ TCTCACTATCTGCTGACGATTTTCCAGTGCTAAAAAGTAAAAACAGAATGTATTTTTTGG
____________________________________________________________
consensus TCTCACTATCTGCTGACGATTTTCCAGTGCTAAAAAGTAAAAACAGAATGTATTTTTTGG
. : . : . : . : . : . :
rJMSF016C22+ AACAAGGCTATTGTATCAGTGTTAGTTTTAATACATATACTGACATATTGAGTGTATAAG
____________________________________________________________
consensus AACAAGGCTATTGTATCAGTGTTAGTTTTAATACATATACTGACATATTGAGTGTATAAG