Contig 011290:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001H17Sequence385002041 (6)ref|XP_011093033.1|5e-18PREDICTED: dynamin-related protein 5A-like [Sesamum indicum]730011290 (4)ref|XP_006339704.1|9e-104PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]
JMSF011I18Sequence378002041 (6)gb|EPS62179.1|2e-33phragmoplastin, partial [Genlisea aurea]754011290 (4)ref|XP_006339704.1|1e-109PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]
JMSF016C22Sequence255002041 (6)ref|XP_002456150.1|1e-12hypothetical protein SORBIDRAFT_03g031260 [Sorghum bicolor] gb|EES01270.1| hypot786011290 (4)ref|XP_006339704.1|2e-106PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]
JMSF036C15Sequence683002041 (6)ref|XP_009621910.1|3e-119PREDICTED: dynamin-related protein 12A-like [Nicotiana tomentosiformis]786011290 (4)ref|XP_006339704.1|2e-107PREDICTED: dynamin-related protein 5A-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF016C22+ GATGCA
                      ____________________________________________________________
consensus GATGCA
 
. : . : . : . : . : . :
rJMSF001H17+ GTTCATGGTATACTGANGGATCTGGTTCACAAGTCAATAAGTGAAACTATGGAGTTGAAG
rJMSF011I18+ TACTGAAGGATCTGGTTCACAAGTCAATAAGTGAAACTATGGAGTTGAAG
rJMSF036C15+ TACTGAAGGATCTGGTTCACAAGTCAATAAGTGAAACTATGGAGTTGAAG
rJMSF016C22+ GTTCATGGTATACTGAAGGATCTGGTTCACAAGTCAATAAGTGAAACTATGGAGTTGAAG
                      ____________________________________________________________
consensus GTTCATGGTATACTGAAGGATCTGGTTCACAAGTCAATAAGTGAAACTATGGAGTTGAAG
 
. : . : . : . : . : . :
rJMSF001H17+ CAGTACCCTTCTCTTAGAGTGGAGGTCAGTAATGCGGCTGTTGAATCATTAGAAAGAATG
rJMSF011I18+ CAGTACCCTTCTCTTAGAGTGGAGGTCAGTAATGCGGCTGTTGAATCATTAGAAAGAATG
rJMSF036C15+ CAGTACCCTTCTCTTAGAGTGGAGGTCAGTAATGCGGCTGTTGAATCATTAGAAAGAATG
rJMSF016C22+ CAGTACCCTTCTCNTAGAGTGGAGGTCAGTAATGCGGCTGTTGAATCATTAGAAAGAATG
                      ____________________________________________________________
consensus CAGTACCCTTCTCTTAGAGTGGAGGTCAGTAATGCGGCTGTTGAATCATTAGAAAGAATG
 
. : . : . : . : . : . :
rJMSF001H17+ AGGGATGAAAGCAAGAAAGCAACTCTACAGCTTGTTGAAATGGAGTGCAGTTACCTGACT
rJMSF011I18+ AGGGATGAAAGCAAGAAAGCAACTCTACAGCTTGTTGAAATGGAGTGCAGTTACCTGACT
rJMSF036C15+ AGGGATGAAAGCAAGAAAGCAACTCTACAGCTTGTTGAAATGGAGTGCAGTTACCTGACT
rJMSF016C22+ AGGGATGAAAGCAAGAAAGCAACTCTACAGCTTGTTGAAATGGAGTGCAGTTACCTGACT
                      ____________________________________________________________
consensus AGGGATGAAAGCAAGAAAGCAACTCTACAGCTTGTTGAAATGGAGTGCAGTTACCTGACT
 
. : . : . : . : . : . :
rJMSF001H17+ GTAGATNTCTTCCGAAAGCTTCCTCAAGATATTGAGAAGGGTGGAAATCCAACCCATTCA
rJMSF011I18+ GTAGATTTCTTCCGAAAGCTTCCTCAAGATATTGAGAAGGGTGGAAATCCAACCCATTCA
rJMSF036C15+ GTAGATTTCTTCCGAAAGCTTCCTCAAGATATTGAGAAGGGTGGAAATCCAACCCATTCA
rJMSF016C22+ GTAGATTTCTTCCGAAAGCTTCCTCAAGATATTGAGAAGGGTGGAAATCCAACCCATTCA
                      ____________________________________________________________
consensus GTAGATTTCTTCCGAAAGCTTCCTCAAGATATTGAGAAGGGTGGAAATCCAACCCATTCA
 
. : . : . : . : . : . :
rJMSF001H17+ ATTTTTGATAGATACAACGACTCCTATCTCCGGAGAATTGGATCAAATGTTTTGTCTTAT
rJMSF011I18+ ATTTTTGATAGATACAACGACTCCTATCTCCGGAGAATTGGATCAAATGTTTTGTCTTAT
rJMSF036C15+ ATTTTTGATAGATACAACGACTCCTATCTCCGGAGAATTGGATCAAATGTTTTGTCTTAT
rJMSF016C22+ ATTTTTGATAGATACAACGACTCCTATCTCCGGAGAATTGGATCAAATGTTTTGTCTTAT
                      ____________________________________________________________
consensus ATTTTTGATAGATACAACGACTCCTATCTCCGGAGAATTGGATCAAATGTTTTGTCTTAT
 
. : . : . : . : . : . :
rJMSF001H17+ GTCAATATGGTTTGTGCAAGTTTGAGGAATTCCATTCCGAAGTCTATTGTTTATTGTCAA
rJMSF011I18+ GTCAATATGGTTTGTGCAAGTTTGAGGAATTCCATTCCGAAGTCTATTGTTTATTGTCAA
rJMSF036C15+ GTCAATATGGTTTGTGCAAGTTTGAGGAATTCCATTCCGAAGTCTATTGTTTATTGTCAA
rJMSF016C22+ GTCAATATGGTTTGTGCAAGTTTGAGGAATTCCATTCCGAAGTCTATTGTTTATTGTCAA
                      ____________________________________________________________
consensus GTCAATATGGTTTGTGCAAGTTTGAGGAATTCCATTCCGAAGTCTATTGTTTATTGTCAA
 
. : . : . : . : . : . :
rJMSF001H17+ GTACGAGAGGCCAAACGCAGTTTGCTTGATCATTTCTTCGCTGATTTAGGCAAAAAGGAG
rJMSF011I18+ GTACGAGAGGCCAAACGCAGTTTGCTTGATCATTTCTTCGCTGATTTAGGCAAAAAGGAG
rJMSF036C15+ GTACGAGAGGCCAAACGCAGTTTGCTTGATCATTTCTTCGCTGATTTAGGCAAAAAGGAG
rJMSF016C22+ GTACGAGAGGCCAAACGCAGTTTGCTTGATCATTTCTTCGCTGATTTAGGCAAAAAGGAG
                      ____________________________________________________________
consensus GTACGAGAGGCCAAACGCAGTTTGCTTGATCATTTCTTCGCTGATTTAGGCAAAAAGGAG
 
. : . : . : . : . : . :
rJMSF001H17+ GGTAAACAACTAGGTAAACTTTTGGATGAGGATCCAGCGGTTATGCAGAGACGTATCTCT
rJMSF011I18+ GGTAAACAACTAGGTAAACTTTTGGATGAGGATCCAGCGGTTATGCAGAGACGTATCTCT
rJMSF036C15+ GGTAAACAACTAGGTAAACTTTTGGATGAGGATCCAGCGGTTATGCAGAGACGTATCTCT
rJMSF016C22+ GGTAAACAACTAGGTAAACTTTTGGATGAGGATCCAGCGGTTATGCAGAGACGTATCTCT
                      ____________________________________________________________
consensus GGTAAACAACTAGGTAAACTTTTGGATGAGGATCCAGCGGTTATGCAGAGACGTATCTCT
 
. : . : . : . : . : . :
rJMSF001H17+ TTGGGAAAGAGATTGGAGCTGTACAGAGCTGCTCAAGCAGAGATTGATTCCGTCGCATGG
rJMSF011I18+ TTGGGAAAGAGATTGGAGCTGTACAGAGCTGCTCAAGCAGAGATTGATTCCGTCGCATGG
rJMSF036C15+ TTGGGAAAGAGATTGGAGCTGTACAGAGCTGCTCAAGCAGAGATTGATTCCGTCGCATGG
rJMSF016C22+ TTGGGAAAGAGATTGGAGCTGTACAGAGCTGCTCAAGCAGAGATTGATTCCGTCGCATGG
                      ____________________________________________________________
consensus TTGGGAAAGAGATTGGAGCTGTACAGAGCTGCTCAAGCAGAGATTGATTCCGTCGCATGG
 
. : . : . : . : . : . :
rJMSF001H17+ TCAAAATAAACATGAACTCTTCTTATCTCAAGCAGAGATTGATTCTATTTGTTGGGATTG
rJMSF011I18+ TCAAAATAAACATGAACTCTTCTTATCTCAAGCAGAGATTGATTCTATTTGTTGGGATTG
rJMSF036C15+ TCAAAATAAACATGAACTCTTCTTATCTCAAGCAGAGATTGATTCTATTTGTTGGGATTG
rJMSF016C22+ TCAAAATAAACATGAACTCTTCTTATCTCAAGCAGAGATTGATTCTATTTGTTGGGATTG
                      ____________________________________________________________
consensus TCAAAATAAACATGAACTCTTCTTATCTCAAGCAGAGATTGATTCTATTTGTTGGGATTG
 
. : . : . : . : . : . :
rJMSF001H17+ GGATAGTGTTAAGAGACGTTTGATTCTTTGCCTCGACATCTTGTCTTCCTTAAGCAGCTA
rJMSF011I18+ GGATAGTGTTAAGAGACGTTTGATTCTTTGCCTCGACATCTTGTCTTCCTTAAGCAGCTA
rJMSF036C15+ GGATAGTGTTAAGAGACGTTTGATTCTTTGCCTCGACATCTTGTCTTCCTTAAGCAGCTA
rJMSF016C22+ GGATAGTGTTAAGAGACGTTTGATTCTTTGCCTCGACATCTTGTCTTCCTTAAGCAGCTA
                      ____________________________________________________________
consensus GGATAGTGTTAAGAGACGTTTGATTCTTTGCCTCGACATCTTGTCTTCCTTAAGCAGCTA
 
. : . : . : . : . : . :
rJMSF001H17+ TCTCACTATCTGCTGACGATTTTCCAGTGCTAAAAAGTAAAAAC
rJMSF011I18+ TCTCACTATCTGCTGACGATTTTCCAGTGCTAAAAAGTAAAAAC
rJMSF036C15+ TCTCACTATCTGCTGACGATTTTCCAGTGCTAAAAAGTAAAAAC
rJMSF016C22+ TCTCACTATCTGCTGACGATTTTCCAGTGCTAAAAAGTAAAAACAGAATGTATTTTTTGG
                      ____________________________________________________________
consensus TCTCACTATCTGCTGACGATTTTCCAGTGCTAAAAAGTAAAAACAGAATGTATTTTTTGG
 
. : . : . : . : . : . :
rJMSF016C22+ AACAAGGCTATTGTATCAGTGTTAGTTTTAATACATATACTGACATATTGAGTGTATAAG
                      ____________________________________________________________
consensus AACAAGGCTATTGTATCAGTGTTAGTTTTAATACATATACTGACATATTGAGTGTATAAG