Contig 011288:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015F07Sequence734011288 (2)gb|AFR58665.1|9e-80jasmonoyl-L-isoleucine hydrolase 1 [Nicotiana attenuata]
JMSF015G07Sequence237016739ref|XP_006343020.1|5e-14PREDICTED: IAA-amino acid hydrolase ILR1-like 4-like [Solanum tuberosum]739011288 (2)gb|AFR58665.1|1e-83jasmonoyl-L-isoleucine hydrolase 1 [Nicotiana attenuata]

Alignment

This contig is upended


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rJMSF015F07+                                                       CATTAGACTCTCAGG
rJMSF015G07+                                                  TGATCCATTAGACTCTCAGG
                      ____________________________________________________________
consensus                                                     TGATCCATTAGACTCTCAGG
 
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rJMSF015F07+          TAGTTACAGTTGGTCATTTCCGAGGAGGGGGTGCGTTTNATGTTANTCCNGATTCTGTTA
rJMSF015G07+          TAGTTACAGTTGGTCATTTCCGAGGAGGGGGTGCGTTTAATGTTATTCCTGATTCTGTTA
                      ____________________________________________________________
consensus             TAGTTACAGTTGGTCATTTCCGAGGAGGGGGTGCGTTTAATGTTATTCCTGATTCTGTTA
 
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rJMSF015F07+          CTATTGGTGGAACTTTCCGCGCCTTCTCAAGGGAGGGCATGGTACAGCTCAGGAAGCGTA
rJMSF015G07+          CTATTGGTGGAACTTTCCGCGCCTTCTCAAGGGAGGGCATGGTACAGCTCAGGAAGCGTA
                      ____________________________________________________________
consensus             CTATTGGTGGAACTTTCCGCGCCTTCTCAAGGGAGGGCATGGTACAGCTCAGGAAGCGTA
 
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rJMSF015F07+          TCGAGGAGGTAATAGTCGGGCAAGCCGCTGTGCAGAGGTGCAATGCGACGGTTAACTTTC
rJMSF015G07+          TCGAGGAGGTAATAGTCGGGCAAGCCGCTGTGCAGAGGTGCAATGCGACGGTTAACTTTC
                      ____________________________________________________________
consensus             TCGAGGAGGTAATAGTCGGGCAAGCCGCTGTGCAGAGGTGCAATGCGACGGTTAACTTTC
 
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rJMSF015F07+          TGGAAAGTGAGAAGCCCTCCATCCCACCCACCATTAATGACAGAGACTTGCACCAGCATT
rJMSF015G07+          TGGAAAGTGAGAAGCCCTCCATCCCACCCACCATTAATGACAGAGACTTGCACCAGCATT
                      ____________________________________________________________
consensus             TGGAAAGTGAGAAGCCCTCCATCCCACCCACCATTAATGACAGAGACTTGCACCAGCATT
 
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rJMSF015F07+          TCCAGAAAGTTGCAGGCGATTTGCTGGGAAGTTCTCGTGTTAAGGACCACAAACCATTGA
rJMSF015G07+          TCCAGAAAGTTGCAGGCGATTTGCTGGGAAGTTCTCGTGTTAAGGACCACAAACCATTGA
                      ____________________________________________________________
consensus             TCCAGAAAGTTGCAGGCGATTTGCTGGGAAGTTCTCGTGTTAAGGACCACAAACCATTGA
 
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rJMSF015F07+          TGGCGGGCGACGATTTTGCATTTTATCAGGAGGTTATGCCTGGTTACATATATGGACTTG
rJMSF015G07+          TGGCGGGCGACGATTTTGCATTTTATCAGGAGGTTATGCCTGGTTACATATATGGACTTG
                      ____________________________________________________________
consensus             TGGCGGGCGACGATTTTGCATTTTATCAGGAGGTTATGCCTGGTTACATATATGGACTTG
 
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rJMSF015F07+          GGTTGAAGGATGAAGCTGCAGATGACAAATCCGCATCAGAACACTCGCCGTATTTTAAGG
rJMSF015G07+          GGTTGAAGGATGAAGCTGCAGATGACAAATCCGCATCAGAACACTCGCCGTATTTTAAGG
                      ____________________________________________________________
consensus             GGTTGAAGGATGAAGCTGCAGATGACAAATCCGCATCAGAACACTCGCCGTATTTTAAGG
 
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rJMSF015F07+          TTAACGAGGACGCCTTTCCTTATGGCGCTGCTCTCCAGGCGTCCTTGGCAGCGAGGTACA
rJMSF015G07+          TTAACGAGGACGCCTTTCCTTATGGCGCTGCTCTCCAGGCGTCCTTGGCAGCGAGGTACA
                      ____________________________________________________________
consensus             TTAACGAGGACGCCTTTCCTTATGGCGCTGCTCTCCAGGCGTCCTTGGCAGCGAGGTACA
 
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rJMSF015F07+          TTCTTGAACGCCAGCTGGAATGGGTTACAAACAAGCATGATGAACTGTGAGGCTCCTGCA
rJMSF015G07+          TTCTTGAACGCCAGCTGGAATGGGTTACAAACAAGCATGATGAACTGTGAGGCTCCTGCA
                      ____________________________________________________________
consensus             TTCTTGAACGCCAGCTGGAATGGGTTACAAACAAGCATGATGAACTGTGAGGCTCCTGCA
 
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rJMSF015F07+          GAGATTATCATTACATTCAAGAAAATGCAAAGATTTTGGCAGACATTTCACATTTGGATA
rJMSF015G07+          GAGATTATCATTACATTCAAGAAAATGCAAAGATTTTGGCAGACATTTCACATTTGGATA
                      ____________________________________________________________
consensus             GAGATTATCATTACATTCAAGAAAATGCAAAGATTTTGGCAGACATTTCACATTTGGATA
 
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rJMSF015F07+          ATGTTTTTATCATTCTTGAATAGCTTATGGATTTTTGTACTAGAATTAGGCATATCTAGT
rJMSF015G07+          ATGTTTTTATCATTCTTGAATA-CTTATGGATTTTTGTACTAGAATTAGGCATATCTAGT
                      ____________________________________________________________
consensus             ATGTTTTTATCATTCTTGAATAGCTTATGGATTTTTGTACTAGAATTAGGCATATCTAGT
 
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rJMSF015F07+          GCTAGTTTGTTTAGGTAACAAGTGACACGTTTGAATAAATAGAAA               
rJMSF015G07+          GCTAGTTTGTTTAGGTAACAAGTGACACGTTTGAATAAATAGAAAAGGATACAAGACTTT
                      ____________________________________________________________
consensus             GCTAGTTTGTTTAGGTAACAAGTGACACGTTTGAATAAATAGAAAAGGATACAAGACTTT