| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF014F06 | Sequence | 552 | 008091 (5) | ref|XP_006348428.1| | 2e-53 | PREDICTED: methionine aminopeptidase 2B-like isoform X1 [Solanum tuberosum] ref | 725 | 011283 (4) | ref|XP_004228613.1| | 8e-146 | PREDICTED: methionine aminopeptidase 2B [Solanum lycopersicum] ref|XP_010315836. |
| JMSF022F21 | Sequence | 639 | 008091 (5) | ref|XP_006348428.1| | 7e-80 | PREDICTED: methionine aminopeptidase 2B-like isoform X1 [Solanum tuberosum] ref | 800 | 011283 (4) | ref|XP_006348428.1| | 5e-172 | PREDICTED: methionine aminopeptidase 2B-like isoform X1 [Solanum tuberosum] ref |
| JMSF031N08 | Sequence | 656 | 008091 (5) | ref|XP_006348428.1| | 1e-73 | PREDICTED: methionine aminopeptidase 2B-like isoform X1 [Solanum tuberosum] ref | 674 | 011283 (4) | ref|XP_004228613.1| | 2e-146 | PREDICTED: methionine aminopeptidase 2B [Solanum lycopersicum] ref|XP_010315836. |
| JMSF050G14 | Sequence | 710 | 008091 (5) | ref|XP_006348428.1| | 3e-66 | PREDICTED: methionine aminopeptidase 2B-like isoform X1 [Solanum tuberosum] ref | 713 | 011283 (4) | ref|XP_004228613.1| | 9e-151 | PREDICTED: methionine aminopeptidase 2B [Solanum lycopersicum] ref|XP_010315836. |
This contig is upended
. : . : . : . : . : . :
rJMSF022F21+ TTCAGTATGATGATGTCATGAAATTGGATTTTGGGACACA
____________________________________________________________
consensus TTCAGTATGATGATGTCATGAAATTGGATTTTGGGACACA
. : . : . : . : . : . :
rJMSF031N08+ ATCCCATGTTTGATCC
rJMSF050G14+ ATCCCATGTTTGATCC
rJMSF022F21+ CATTGATGGTCGCATAGTAGACTGTGCATTTACTGTGGCTTTCAATCCCATGTTTGATCC
rJMSF014F06+ GATCC
____________________________________________________________
consensus CATTGATGGTCGCATAGTAGACTGTGCATTTACTGTGGCTTTCAATCCCATGTTTGATCC
. : . : . : . : . : . :
rJMSF031N08+ ACTGCTNGAAGCCTCACGAGAAGCCACCAATACAGGAATCAAGGCAGCGGGTATTGATGT
rJMSF050G14+ ACTGCTTGAAGCCTCACGAGAAGCCACCAATACAGGAATCAAGGCAGCGGGTATTGATGT
rJMSF022F21+ ACTGCTTGAAGCCTCACGAGAAGCCACCAATACAGGAATCAAGGCAGCGGGTATTGATGT
rJMSF014F06+ ACTGCTTGAAGCCTCACGAGAAGCCACCAATACAGGAATCAAGGCAGCGGGTATTGATGT
____________________________________________________________
consensus ACTGCTTGAAGCCTCACGAGAAGCCACCAATACAGGAATCAAGGCAGCGGGTATTGATGT
. : . : . : . : . : . :
rJMSF031N08+ TCGCCTTTGTGATGTTGGTGCTGCTATCCAGGAGGTCATGGAGTCCTATGAGGTCGAAAT
rJMSF050G14+ TCGCCTTTGTGATGTTGGTGCTGCTATCCAGGAGGTCATGGAGTCCTATGAGGTCGAAAT
rJMSF022F21+ TCGCCTTTGTGATGTTGGTGCTGCTATCCAGGAGGTCATGGAGTCCTATGAGGTCGAAAT
rJMSF014F06+ TCGCCTTTGTGATGTTGGTGCTGCTATCCAGGAGGTCATGGAGTCCTATGAGGTCGAAAT
____________________________________________________________
consensus TCGCCTTTGTGATGTTGGTGCTGCTATCCAGGAGGTCATGGAGTCCTATGAGGTCGAAAT
. : . : . : . : . : . :
rJMSF031N08+ TAATGGAAAAGTCTTCCAAGTTAAAAGTGTCCGAAATTTGAATGGGCATAGCATTGGGCA
rJMSF050G14+ TAATGGAAAAGTCTTCCAAGTTAAAAGTGTCCGAAATTTGAATGGGCATAGCATTGGGCA
rJMSF022F21+ TAATGGAAAAGTCTTCCAAGTTAAAAGTGTCCGAAATTTGAATGGGCATAGCATTGGGCA
rJMSF014F06+ TAATGGAAAAGTCTTCCAAGTTAAAAGTGTCCGAAATTTGAATGGGCATAGCATTGGGCA
____________________________________________________________
consensus TAATGGAAAAGTCTTCCAAGTTAAAAGTGTCCGAAATTTGAATGGGCATAGCATTGGGCA
. : . : . : . : . : . :
rJMSF031N08+ ATATCAAATTCATGCTGGTAAATCTGTCCCAATTGTGAAAGGAGGAGAACAAACTAAGAT
rJMSF050G14+ ATATCAAATTCATGCTGGTAAATCTGTCCCAATTGTGAAAGGAGGAGAACAAACTAAGAT
rJMSF022F21+ ATATCAAATTCATGCTGGTAAATCTGTCCCAATTGTGAAAGGAGGAGAACAAACTAAGAT
rJMSF014F06+ ATATCAAATTCATGCTGGTAAATCTGTCCCAATTGTGAAAGGAGGAGAACAAACTAAGAT
____________________________________________________________
consensus ATATCAAATTCATGCTGGTAAATCTGTCCCAATTGTGAAAGGAGGAGAACAAACTAAGAT
. : . : . : . : . : . :
rJMSF031N08+ GGAAGAGGGTGAATTTTATGCCATTGAGACTTTCGGGTCAACAGGGAAGGGATATGTAAG
rJMSF050G14+ GGAAGAGGGTGAATTTTATGCCATTGAGACTTTCGGGTCAACAGGGAAGGGATATGTAAG
rJMSF022F21+ GGAAGAGGGTGAATTTTATGCCATTGAGACTTTCGGGTCAACAGGGAAGGGATATGTAAG
rJMSF014F06+ GGAAGAGGGTGAATTTTATGCCATTGAGACTTTCGGGTCAACAGGGAAGGGATATGTAAG
____________________________________________________________
consensus GGAAGAGGGTGAATTTTATGCCATTGAGACTTTCGGGTCAACAGGGAAGGGATATGTAAG
. : . : . : . : . : . :
rJMSF031N08+ AGAAGATCTAGAGTGCAGTCATTATATGAAGAATTTTGATGTTGGCCACATTCCACTGCG
rJMSF050G14+ AGAAGATCTAGAGTGCAGTCATTATATGAAGAATTTTGATGTTGGCCACATTCCACTGCG
rJMSF022F21+ AGAAGATCTAGAGTGCAGTCATTATATGAAGAATTTTGATGTTGGCCACATTCCACTGCG
rJMSF014F06+ AGAAGATCTAGAGTGCAGTCATTATATGAAGAATTTTGATGTTGGCCACATTCCACTGCG
____________________________________________________________
consensus AGAAGATCTAGAGTGCAGTCATTATATGAAGAATTTTGATGTTGGCCACATTCCACTGCG
. : . : . : . : . : . :
rJMSF031N08+ GTTGCCAAGAGCGAAGCAGTTACTAGCAGCAATAAACAAGAACTTCTTAACCCTTGCTTT
rJMSF050G14+ GTTGCCAAGAGCGAAGCAGTTACTAGCAGCAATAAACAAGAACTTCTCAACCCTTGCTTT
rJMSF022F21+ GTTGCCAAGAGCGAAGCAGTTACTAGCAGCAATAAACAAGAACTTCTCAACCCTTGCTTT
rJMSF014F06+ GTTGCCAAGAGCGAAGCAGTTACTAGCAGCAATAAACAAGAACTTCTCAACCCTTGCTTT
____________________________________________________________
consensus GTTGCCAAGAGCGAAGCAGTTACTAGCAGCAATAAACAAGAACTTCTCAACCCTTGCTTT
. : . : . : . : . : . :
rJMSF031N08+ CNGTAGACGTTATCTGGACCGTCTTGGTGAAACAAAGTATCTGATGGCACTAAAGAATTT
rJMSF050G14+ CTGTAGACGTTATCTGGACCGTCTTGGTGAAACAAAGTATCTGATGGCACTAAAGAATTT
rJMSF022F21+ CTGTAGACGTTATCTGGACCGTCTTGGTGAAACAAAGTATCTGATGGCACTAAAGAATTT
rJMSF014F06+ CTGTAGACGTTATCTGGACCGTCTTGGTGAAACAAAGTATCTGATGGCACTAAAGAATTT
____________________________________________________________
consensus CTGTAGACGTTATCTGGACCGTCTTGGTGAAACAAAGTATCTGATGGCACTAAAGAATTT
. : . : . : . : . : . :
rJMSF031N08+ GTGTGATGCTGGTATTGTTCAGCCATACCCTCCTCTATGTGATAATAAGGGCAGCTATGT
rJMSF050G14+ GTGTGATGCTGGTATTGTTCAGCCATACCCTCCTCTATGTGATAATAAGGGCAGCTATGT
rJMSF022F21+ GTGTGATGCTGGTATTGTTCAGCCATACCCTCCTCTATGTGATAATAAGGGCAGCTATGT
rJMSF014F06+ GTGTGATGCTGGTATTGTTCAGCCATACCCTCCTCTATGTGATAATAAGGGCAGCTATGT
____________________________________________________________
consensus GTGTGATGCTGGTATTGTTCAGCCATACCCTCCTCTATGTGATAATAAGGGCAGCTATGT
. : . : . : . : . : . :
rJMSF031N08+ ATCCCAATTTGAGCACACCATTTTACTTCGTCCGACTTGCAAAGAGGTGGTATCAAGAGG
rJMSF050G14+ ATCCCAATTTGAGCACACCATTTTACTTCGTCCGACTTGCAAAGAGGTGGTATCAAGAGG
rJMSF022F21+ ATCCCAATTTGAGCACACCATTTTACTTCGTCCGACTTGCAAAGAGGTGGTATCAAGAGG
rJMSF014F06+ ATCCCAATTTGAGCACACCATTTTACTTCGTCCGACTTGCAAAGAGGTGGTATCAAGAGG
____________________________________________________________
consensus ATCCCAATTTGAGCACACCATTTTACTTCGTCCGACTTGCAAAGAGGTGGTATCAAGAGG
. : . : . : . : . : . :
rJMSF031N08+ TGATGACTATTGATTTTGAGAATTGTAAAACTCTGTTTTTTCA
rJMSF050G14+ TGATGACTATTGATTTTGAGAATTGTAAAACTCTGTTTTTTCAACCTGTTTCTGGTTTGT
rJMSF022F21+ TGATGACTATTGATTTTGAGAATTGTAAAACTCTGTTTTTTCAACCTGTTTCTGGTTTGT
rJMSF014F06+ TGATGACTATTGATTTTGAGAATTGTAAAACTCTGTTTTTTCAACCTGTTTCTGGTTTGT
____________________________________________________________
consensus TGATGACTATTGATTTTGAGAATTGTAAAACTCTGTTTTTTCAACCTGTTTCTGGTTTGT
. : . : . : . : . : . :
rJMSF050G14+ ATACTTGAGATTTGAC
rJMSF022F21+ ATACTTGAGATTTGAC
rJMSF014F06+ ATACTTGAGATTTGACGATGAAGAGAGTTGTGGATTGCTCTTATTTCTTCGGCATATCAT
____________________________________________________________
consensus ATACTTGAGATTTGACGATGAAGAGAGTTGTGGATTGCTCTTATTTCTTCGGCATATCAT