Contig 011282:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013M18Sequence472006445 (2)ref|XP_009780558.1|2e-36PREDICTED: uncharacterized protein LOC104229598 isoform X2 [Nicotiana sylvestri726011282 (2)gb|KDO80850.1|3e-74hypothetical protein CISIN_1g011723mg [Citrus sinensis]
JMSF052N06Sequence659006445 (2)ref|XP_009616109.1|2e-82PREDICTED: uncharacterized protein LOC104108712 isoform X3 [Nicotiana tomentosi933011282 (2)gb|KCW58228.1|9e-136hypothetical protein EUGRSUZ_H00930 [Eucalyptus grandis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF052N06+ TAANGTATGTGCTCCTGCACTTCATAACTCAG
                      ____________________________________________________________
consensus TAANGTATGTGCTCCTGCACTTCATAACTCAG
 
. : . : . : . : . : . :
rJMSF052N06+ GATTTGCGGGTTCATGNTCTCGAATATGGCAGCGAGATTCTTATTGGGATGCACGCCCAT
                      ____________________________________________________________
consensus GATTTGCGGGTTCATGNTCTCGAATATGGCAGCGAGATTCTTATTGGGATGCACGCCCAT
 
. : . : . : . : . : . :
rJMSF052N06+ CGTCTAGAAGTGGTGAATACCCTCTTTTTATTCCTCGCCAAAATTTTTGCTCTACTGGTG
                      ____________________________________________________________
consensus CGTCTAGAAGTGGTGAATACCCTCTTTTTATTCCTCGCCAAAATTTTTGCTCTACTGGTG
 
. : . : . : . : . : . :
rJMSF052N06+ GAGAAACTTCGTGGTCTGAAAAAAGCTCAAGTAACTTTGGTGTGGCTTCTATGGAGTCTG
                      ____________________________________________________________
consensus GAGAAACTTCGTGGTCTGAAAAAAGCTCAAGTAACTTTGGTGTGGCTTCTATGGAGTCTG
 
. : . : . : . : . : . :
rJMSF052N06+ ATAGGAAGGCTCGCTTGGATTCTTCTGGTAGCAGCAGTTTCAATTATTCTTCTGCTTCAC
                      ____________________________________________________________
consensus ATAGGAAGGCTCGCTTGGATTCTTCTGGTAGCAGCAGTTTCAATTATTCTTCTGCTTCAC
 
. : . : . : . : . : . :
rJMSF052N06+ CACACTCACTTGAAACACACAAGGAGTTACAGAAAGGGATAGCACTTCTCAAGAAAAGTG
rJMSF013M18+ AAAGTG
                      ____________________________________________________________
consensus CACACTCACTTGAAACACACAAGGAGTTACAGAAAGGGATAGCACTTCTCAAGAAAAGTG
 
. : . : . : . : . : . :
rJMSF052N06+ TTGCTTGCGCAACAACATACTGTTATAACATATTATGCCTAGACGTTCCTGCAGAGGCTT
rJMSF013M18+ GTGCTTGCGCAACAACATACTGTTATAACATATTATGCCTAGACGTTCCTGCAGAGGCTT
                      ____________________________________________________________
consensus TTGCTTGCGCAACAACATACTGTTATAACATATTATGCCTAGACGTTCCTGCAGAGGCTT
 
. : . : . : . : . : . :
rJMSF052N06+ CTACTTTTGAAGCATTTGCAAGGTTGTTGACTACCCTTTCTTCTTCCAAGGAAGTCCGAT
rJMSF013M18+ CTACTTTTGAAGCATTTGCAAGGTTGTTGATTACCCTTTCTTCTTCCAAGGAAGTCCGAT
                      ____________________________________________________________
consensus CTACTTTTGAAGCATTTGCAAGGTTGTTGATTACCCTTTCTTCTTCCAAGGAAGTCCGAT
 
. : . : . : . : . : . :
rJMSF052N06+ CTGTATTTTCTTTAAAAATGGCTTGTTCAGGGTCATCCAAGCAAGTCCAACAATTCAGCA
rJMSF013M18+ CTGTATTTTCTTTAAAAATGGCTTGTTCAGGGTCATCCAAGCAAGTCCAACAATTCAGCA
                      ____________________________________________________________
consensus CTGTATTTTCTTTAAAAATGGCTTGTTCAGGGTCATCCAAGCAAGTCCAACAATTCAGCA
 
. : . : . : . : . : . :
rJMSF052N06+ GATCTGTGTGGGATGTAAATTCATTAGTTTCCTCAAGTGCTATGATAGAAAGTGTGCATG
rJMSF013M18+ GATCTGTGTGGGATGTAAATTCATTAGTTTCCTCAAGTGCTATGATAGAAAGTGTGCATG
                      ____________________________________________________________
consensus GATCTGTGTGGGATGTAAATTCATTAGTTTCCTCAAGTGCTATGATAGAAAGTGTGCATG
 
. : . : . : . : . : . :
rJMSF052N06+ CGTTGCAAGCACAAAGAAACATATTTGACCATAATCTTCCAAGTTCTACAGCCAGTTTGC
rJMSF013M18+ CGTTGCAAGCACAAAGAAACATATTTGACCATAATCTTCCAAGTTCTACAGCCAGTTTGC
                      ____________________________________________________________
consensus CGTTGCAAGCACAAAGAAACATATTTGACCATAATCTTCCAAGTTCTACAGCCAGTTTGC
 
. : . : . : . : . : . :
rJMSF052N06+ TTTACGCCAATGAAATATCCGACCTAGGAAGGAATGAAAATTTAATCGAGGGTTGGGATC
rJMSF013M18+ TTTACGCCAATGAAATATCCGACCTAGGAAGGAATGAAAATTTAATCGAGGGTTGGGATC
                      ____________________________________________________________
consensus TTTACGCCAATGAAATATCCGACCTAGGAAGGAATGAAAATTTAATCGAGGGTTGGGATC
 
. : . : . : . : . : . :
rJMSF052N06+ TAATCGAGCACCCCACTTTTCCTCCTCCGCCTTCACAAACCGAAGATGTTGAGCATTGGA
rJMSF013M18+ TAATCGAGCACCCCACTTTTCCTCCTCCGCCTTCACAAACCGAAGATGTTGAGCATTGGA
                      ____________________________________________________________
consensus TAATCGAGCACCCCACTTTTCCTCCTCCGCCTTCACAAACCGAAGATGTTGAGCATTGGA
 
. : . : . : . : . : . :
rJMSF052N06+ CTCGGGCCATGTTCATTGATGCAACGAAAAAGTGACTTCATAGCTTCATCGCTGACTGCC
rJMSF013M18+ CTCGGGCCATGTTCATTGATGCAACGAAAAAGTGACTTCATAGCTTCATCGCTGACTGCC
                      ____________________________________________________________
consensus CTCGGGCCATGTTCATTGATGCAACGAAAAAGTGACTTCATAGCTTCATCGCTGACTGCC
 
. : . : . : . : . : . :
rJMSF052N06+ CTTCAATTCCTGTAAATACAAGTAGTCCAGTGCACATAGAAGAAGCCGCATATCTCCTTC
rJMSF013M18+ CTTCAATTCCTGTAAATACAAGTAGTCCAGTGCACATAGAAGAAGCCGCATATCTCCTTC
                      ____________________________________________________________
consensus CTTCAATTCCTGTAAATACAAGTAGTCCAGTGCACATAGAAGAAGCCGCATATCTCCTTC
 
. : . : . : . : . : . :
rJMSF052N06+ CGTGCATTAAATGTATCCTAGTATTCAGTTTCTTTATGCTTTGGTTTTTCTCTCTGTGAT
rJMSF013M18+ CGTGCATTAAATGTATCCTAGTATTCAGTTTCTTTATGCTTTGGTTTTTCTCTCTGTGAT
                      ____________________________________________________________
consensus CGTGCATTAAATGTATCCTAGTATTCAGTTTCTTTATGCTTTGGTTTTTCTCTCTGTGAT
 
. : . : . : . : . : . :
rJMSF052N06+ T
rJMSF013M18+ TTACAATGTTGAACAGGAAAATGTATATTTGTCTGTGTTTCCCGTTCAAGACTGAAGAAA
                      ____________________________________________________________
consensus TTACAATGTTGAACAGGAAAATGTATATTTGTCTGTGTTTCCCGTTCAAGACTGAAGAAA
 
. : . : . : . : . : . :
rJMSF013M18+ TCCTTTTATAATTGCTTTTGACCATATATTTTATTACAAAACTAAAAGTGGGGAGGCCCG
                      ____________________________________________________________
consensus TCCTTTTATAATTGCTTTTGACCATATATTTTATTACAAAACTAAAAGTGGGGAGGCCCG