Contig 011280:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF021E24+                                                              AGGTGGGC
                      ____________________________________________________________
consensus                                                                 AGGTGGGC
 
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rJMSF021E24+          AGCTTATGGTATCTTGCATGATCCTGATACTCGAAATAAGG-CCGTGCAGTTCATAAGGC
rJMSF013E09+                          CATGATCCTGATACTCGAAATAAGGCCCGTGCAGTTCATAAGGC
                      ____________________________________________________________
consensus             AGCTTATGGTATCTTGCATGATCCTGATACTCGAAATAAGGCCCGTGCAGTTCATAAGGC
 
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rJMSF021E24+          AACTTGGAGAAGCCATGCATTCTGTAAACTTAGAAAGGAATATGAAGAAATCTCTGGAGT
rJMSF013E09+          AACTTGGAGAAGCCATGCATTCTGTAAACTTAGAAAGGAATATGAAGAAATCTCTGGAGT
                      ____________________________________________________________
consensus             AACTTGGAGAAGCCATGCATTCTGTAAACTTAGAAAGGAATATGAAGAAATCTCTGGAGT
 
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rJMSF021E24+          TAGTTTATGTCATAGGCCCACCGCATTCTGATAAGCTGCAGGAGCATGACTTTGGGCCCG
rJMSF013E09+          TAGTTTATGTCATAGGCCCACCGCATTCTGATAAGCTGCAGGAGCATGACTTTGGGCCCG
                      ____________________________________________________________
consensus             TAGTTTATGTCATAGGCCCACCGCATTCTGATAAGCTGCAGGAGCATGACTTTGGGCCCG
 
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rJMSF021E24+          AAGATTTAAGAAGTTTGGGTGACACTGTGGATGGTTTCTCTCTTATGACTTATGACTTCT
rJMSF013E09+          AAGATTTAAGAAGTTTGGGTGACACTGTGGATGGTTTCTCTCTTATGACTTATGACTTCT
                      ____________________________________________________________
consensus             AAGATTTAAGAAGTTTGGGTGACACTGTGGATGGTTTCTCTCTTATGACTTATGACTTCT
 
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rJMSF021E24+          CAGGGCCGCAGAGTCCAGGGCCAAATGCACCTCTGAATTGGATACACTCTATATTGCAGC
rJMSF013E09+          CAGGGCCGCAGAGTCCAGGGCCAAATGCACCTCTGAATTGGATACACTCTATATTGCAGC
                      ____________________________________________________________
consensus             CAGGGCCGCAGAGTCCAGGGCCAAATGCACCTCTGAATTGGATACACTCTATATTGCAGC
 
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rJMSF021E24+          TTCTTCTTGGTGCTCGAGGAGTTGATCAGAGATTGGCTAGAAAGATATTCCTTGGCATCA
rJMSF013E09+          TTCTTCTTGGTGCTCGAGGAGTTGATCAGAGATTGGCTAGAAAGATATTCCTTGGCATCA
                      ____________________________________________________________
consensus             TTCTTCTTGGTGCTCGAGGAGTTGATCAGAGATTGGCTAGAAAGATATTCCTTGGCATCA
 
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rJMSF021E24+          ATTTCTATGGAAATGATTTTGTCATTTCAGGAGGTTTAGGTGGTGGACCTATTATAGCAC
rJMSF013E09+          ATTTCTATGGAAATGATTTTGTCATTTCAGGAGGTTTAGGTGGTGGACCTATTATAGCAC
                      ____________________________________________________________
consensus             ATTTCTATGGAAATGATTTTGTCATTTCAGGAGGTTTAGGTGGTGGACCTATTATAGCAC
 
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rJMSF021E24+          ACGAGTATATATCGTTACTGGAGAAGCACAAGCCTGCATTGCAGTGGGAGGGGAAAAGTG
rJMSF013E09+          ACGAGTATATATCGTTACTGGAGAAGCACAAGCCTGCATTGCAGTGGGAGGGGAAAAGTG
                      ____________________________________________________________
consensus             ACGAGTATATATCGTTACTGGAGAAGCACAAGCCTGCATTGCAGTGGGAGGGGAAAAGTG
 
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rJMSF021E24+          GTGAGCATTTCTTCTTGTACGCTGACGATCAACATGCCAGGCATGTAGTATTTTACCCGA
rJMSF013E09+          GTGAGCATTTCTTCTTGTACGCTGACGATCAACATGCCAGGCATGTAGTATTTTACCCGA
                      ____________________________________________________________
consensus             GTGAGCATTTCTTCTTGTACGCTGACGATCAACATGCCAGGCATGTAGTATTTTACCCGA
 
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rJMSF021E24+          CGCTCATGTCACTTGCAAAGCGGCTTGAGGTAGCTGCTTCCTGGGGTGCTGGCATCTCAA
rJMSF013E09+          CGCTCATGTCACTTGCAAAGCGGCTTGAGGTAGCTGCTTCCTGGGGTGCTGGCATCTCAA
                      ____________________________________________________________
consensus             CGCTCATGTCACTTGCAAAGCGGCTTGAGGTAGCTGCTTCCTGGGGTGCTGGCATCTCAA
 
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rJMSF021E24+          TCTGGGAAATCGGGCAAGGATTGGATTCTTTTCTTGATATTTTGTAGTGCAGAAGTTTTG
rJMSF013E09+          TCTGGGAAATCGGGCAAGGATTGGATTCTTTTCTTGATATTTTGTAGTGCAGAAGTTTTG
                      ____________________________________________________________
consensus             TCTGGGAAATCGGGCAAGGATTGGATTCTTTTCTTGATATTTTGTAGTGCAGAAGTTTTG
 
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rJMSF021E24+          GCTCTTTGTTATGCTTCCTTCATAGCCACTGTAACACAATTGTTCCTTTTCTTTGCTGAG
rJMSF013E09+          GCTCTTTGTTATGCTTCCTTCATAGCCACTGTAACACAATTGTTCCTTTTCTTTGCTGAG
                      ____________________________________________________________
consensus             GCTCTTTGTTATGCTTCCTTCATAGCCACTGTAACACAATTGTTCCTTTTCTTTGCTGAG
 
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rJMSF021E24+          TACTATAGGAC-AAAAGCTGTGTTGTCTCATATTAGTCATATGCTGTACTCC        
rJMSF013E09+          TACTATAGGACAAAAAGCTGTGTTGTCTCATATTAGTCATATGCTGTACTCCCTGTACTG
                      ____________________________________________________________
consensus             TACTATAGGACAAAAAGCTGTGTTGTCTCATATTAGTCATATGCTGTACTCCCTGTACTG