Contig 011279:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN045A05Sequence630011279 (2)ref|XP_004232283.1|3e-48PREDICTED: WAT1-related protein At5g40240-like [Solanum lycopersicum]
JMSF012P08Sequence396010624 (2)ref|XP_004232283.1|2e-26PREDICTED: WAT1-related protein At5g40240-like [Solanum lycopersicum]753011279 (2)ref|XP_009761506.1|3e-44PREDICTED: WAT1-related protein At5g40240-like isoform X2 [Nicotiana sylvestris

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN045A05- TGGCAATGGGA
                      ____________________________________________________________
consensus TGGCAATGGGA
 
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JMFN045A05- AATGAGATTCTGAGAAAGGAAGTTCTTCCATTTGCAGCAATGGTAGTAGTGGTGTGTATG
                      ____________________________________________________________
consensus AATGAGATTCTGAGAAAGGAAGTTCTTCCATTTGCAGCAATGGTAGTAGTGGTGTGTATG
 
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JMFN045A05- GAGATGGCAACATCCACAATAGCCAAAGCAGCCCTTAATTCCGGGCTAAGCTCTCTTATT
                      ____________________________________________________________
consensus GAGATGGCAACATCCACAATAGCCAAAGCAGCCCTTAATTCCGGGCTAAGCTCTCTTATT
 
. : . : . : . : . : . :
JMFN045A05- TTAGTGCTTTACTACAATTTCCTTGGCATCCTCCTTCTTCTTCCTGGATTCTTCATCCAG
                      ____________________________________________________________
consensus TTAGTGCTTTACTACAATTTCCTTGGCATCCTCCTTCTTCTTCCTGGATTCTTCATCCAG
 
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JMFN045A05- AGACACAGAAGGAACCCACTGCCTATAACGTTGTCTATTCTGAGTAGATGTTTCATCCTT
                      ____________________________________________________________
consensus AGACACAGAAGGAACCCACTGCCTATAACGTTGTCTATTCTGAGTAGATGTTTCATCCTT
 
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JMFN045A05- GGCCTGATCGGGACATGTTTGGTGATGGGTTTGGGTTTCCAAGGGCTCAAGTATAGCTCT
                      ____________________________________________________________
consensus GGCCTGATCGGGACATGTTTGGTGATGGGTTTGGGTTTCCAAGGGCTCAAGTATAGCTCT
 
. : . : . : . : . : . :
JMFN045A05- CCTACTCTGGGTGCAGGCATTAGTAACTTGATGCCTGGTTTTACATTTGTTCTTGCCATG
                      ____________________________________________________________
consensus CCTACTCTGGGTGCAGGCATTAGTAACTTGATGCCTGGTTTTACATTTGTTCTTGCCATG
 
. : . : . : . : . : . :
JMFN045A05- ATTTTCAGGATGGAGAAGTTTGAGGTGAATAGAAGAACATGGCAAGCAAAATCAGTGGGC
rJMSF012P08+ AGAAGAACATGGCAAGCAAGATCAGTGGGC
                      ____________________________________________________________
consensus ATTTTCAGGATGGAGAAGTTTGAGGTGAATAGAAGAACATGGCAAGCAAGATCAGTGGGC
 
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JMFN045A05- ACAGTTCTTTCAATTATAGGGGCATCTATCATGACTCTATATCAAGGACCAACAATCTTG
rJMSF012P08+ ACAATTGTGTCAATCATAGGGGCATTTGTCATGACTCTATATCAAGGACCAACAATCTTG
                      ____________________________________________________________
consensus ACAGTTGTTTCAATTATAGGGGCATTTGTCATGACTCTATATCAAGGACCAACAATCTTG
 
. : . : . : . : . : . :
JMFN045A05- GGATC
rJMSF012P08+ GGATCTTCGTCTATTTTATTGCCTCAGAAATCTCTTCTGTCAGATGAATATTCATCAAGG
                      ____________________________________________________________
consensus GGATCTTCGTCTATTTTATTGCCTCAGAAATCTCTTCTGTCAGATGAATATTCATCAAGG
 
. : . : . : . : . : . :
rJMSF012P08+ TGGGTGGTGGGAGGTGTTATGAGTGTAGCTGCATACCTTTTTCTATCTGTGTGGAACATT
                      ____________________________________________________________
consensus TGGGTGGTGGGAGGTGTTATGAGTGTAGCTGCATACCTTTTTCTATCTGTGTGGAACATT
 
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rJMSF012P08+ CTTCAGACAGCTATACTAAAGAATTTCCCAGAACAGAGTACAGTAGTGTTCTTCGGTACT
                      ____________________________________________________________
consensus CTTCAGACAGCTATACTAAAGAATTTCCCAGAACAGAGTACAGTAGTGTTCTTCGGTACT
 
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rJMSF012P08+ GGCTTTACTAGTATCCAATGCGCAATTGTTTCAGCACTAGTAGAAAGAAAGCTGGATGCT
                      ____________________________________________________________
consensus GGCTTTACTAGTATCCAATGCGCAATTGTTTCAGCACTAGTAGAAAGAAAGCTGGATGCT
 
. : . : . : . : . : . :
rJMSF012P08+ TGGAAGCTGCAGCCTGGCATTGGAATGGCTGCCATTGTTGCTTCTGCGGTTTTAGAGTCT
                      ____________________________________________________________
consensus TGGAAGCTGCAGCCTGGCATTGGAATGGCTGCCATTGTTGCTTCTGCGGTTTTAGAGTCT
 
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rJMSF012P08+ CTGTGTAACCAAAATATTAATGCCTTCTGCTTGGACATGAAGGGTCCGCTCTACGTTGCC
                      ____________________________________________________________
consensus CTGTGTAACCAAAATATTAATGCCTTCTGCTTGGACATGAAGGGTCCGCTCTACGTTGCC
 
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rJMSF012P08+ ATGTTCAAACCCCTGGGAATTGTCATTGCAGCAATTCTGAATCTCCTTTTTCTTGCAGAC
                      ____________________________________________________________
consensus ATGTTCAAACCCCTGGGAATTGTCATTGCAGCAATTCTGAATCTCCTTTTTCTTGCAGAC
 
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rJMSF012P08+ GCTCTTCATTTAGGCAGAAAGGTGCGGGGAACGGATGCGTTTCTTTTTATTAAACAAAAC
                      ____________________________________________________________
consensus GCTCTTCATTTAGGCAGAAAGGTGCGGGGAACGGATGCGTTTCTTTTTATTAAACAAAAC
 
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rJMSF012P08+ GACGTTGTTTTGATGTGGGGTGCATGATATAATTTGCCACGAAAAGATATCACTTTACAA
                      ____________________________________________________________
consensus GACGTTGTTTTGATGTGGGGTGCATGATATAATTTGCCACGAAAAGATATCACTTTACAA
 
. : . : . : . : . : . :
rJMSF012P08+ GCCTCCAAGAAGGTAGAATCTAGGAAATATCTTGCTTTGTATATCCTTGAAACCAAAGAC
                      ____________________________________________________________
consensus GCCTCCAAGAAGGTAGAATCTAGGAAATATCTTGCTTTGTATATCCTTGAAACCAAAGAC
 
. : . : . : . : . : . :
rJMSF012P08+ TGAGGATTGCTTGATTATATTAGTGTTGGAGAATATTTTAAAGAATATTTTCATGCACTA
                      ____________________________________________________________
consensus TGAGGATTGCTTGATTATATTAGTGTTGGAGAATATTTTAAAGAATATTTTCATGCACTA