Contig 011279:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN045A05Sequence630011279 (2)ref|XP_004232283.1|3e-48PREDICTED: WAT1-related protein At5g40240-like [Solanum lycopersicum]
JMSF012P08Sequence396010624 (2)ref|XP_004232283.1|2e-26PREDICTED: WAT1-related protein At5g40240-like [Solanum lycopersicum]753011279 (2)ref|XP_009761506.1|3e-44PREDICTED: WAT1-related protein At5g40240-like isoform X2 [Nicotiana sylvestris

Alignment

This contig is upended


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JMFN045A05-                                                            TGGCAATGGGA
                      ____________________________________________________________
consensus                                                              TGGCAATGGGA
 
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JMFN045A05-           AATGAGATTCTGAGAAAGGAAGTTCTTCCATTTGCAGCAATGGTAGTAGTGGTGTGTATG
                      ____________________________________________________________
consensus             AATGAGATTCTGAGAAAGGAAGTTCTTCCATTTGCAGCAATGGTAGTAGTGGTGTGTATG
 
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JMFN045A05-           GAGATGGCAACATCCACAATAGCCAAAGCAGCCCTTAATTCCGGGCTAAGCTCTCTTATT
                      ____________________________________________________________
consensus             GAGATGGCAACATCCACAATAGCCAAAGCAGCCCTTAATTCCGGGCTAAGCTCTCTTATT
 
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JMFN045A05-           TTAGTGCTTTACTACAATTTCCTTGGCATCCTCCTTCTTCTTCCTGGATTCTTCATCCAG
                      ____________________________________________________________
consensus             TTAGTGCTTTACTACAATTTCCTTGGCATCCTCCTTCTTCTTCCTGGATTCTTCATCCAG
 
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JMFN045A05-           AGACACAGAAGGAACCCACTGCCTATAACGTTGTCTATTCTGAGTAGATGTTTCATCCTT
                      ____________________________________________________________
consensus             AGACACAGAAGGAACCCACTGCCTATAACGTTGTCTATTCTGAGTAGATGTTTCATCCTT
 
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JMFN045A05-           GGCCTGATCGGGACATGTTTGGTGATGGGTTTGGGTTTCCAAGGGCTCAAGTATAGCTCT
                      ____________________________________________________________
consensus             GGCCTGATCGGGACATGTTTGGTGATGGGTTTGGGTTTCCAAGGGCTCAAGTATAGCTCT
 
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JMFN045A05-           CCTACTCTGGGTGCAGGCATTAGTAACTTGATGCCTGGTTTTACATTTGTTCTTGCCATG
                      ____________________________________________________________
consensus             CCTACTCTGGGTGCAGGCATTAGTAACTTGATGCCTGGTTTTACATTTGTTCTTGCCATG
 
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JMFN045A05-           ATTTTCAGGATGGAGAAGTTTGAGGTGAATAGAAGAACATGGCAAGCAAAATCAGTGGGC
rJMSF012P08+                                        AGAAGAACATGGCAAGCAAGATCAGTGGGC
                      ____________________________________________________________
consensus             ATTTTCAGGATGGAGAAGTTTGAGGTGAATAGAAGAACATGGCAAGCAAGATCAGTGGGC
 
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JMFN045A05-           ACAGTTCTTTCAATTATAGGGGCATCTATCATGACTCTATATCAAGGACCAACAATCTTG
rJMSF012P08+          ACAATTGTGTCAATCATAGGGGCATTTGTCATGACTCTATATCAAGGACCAACAATCTTG
                      ____________________________________________________________
consensus             ACAGTTGTTTCAATTATAGGGGCATTTGTCATGACTCTATATCAAGGACCAACAATCTTG
 
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JMFN045A05-           GGATC                                                       
rJMSF012P08+          GGATCTTCGTCTATTTTATTGCCTCAGAAATCTCTTCTGTCAGATGAATATTCATCAAGG
                      ____________________________________________________________
consensus             GGATCTTCGTCTATTTTATTGCCTCAGAAATCTCTTCTGTCAGATGAATATTCATCAAGG
 
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rJMSF012P08+          TGGGTGGTGGGAGGTGTTATGAGTGTAGCTGCATACCTTTTTCTATCTGTGTGGAACATT
                      ____________________________________________________________
consensus             TGGGTGGTGGGAGGTGTTATGAGTGTAGCTGCATACCTTTTTCTATCTGTGTGGAACATT
 
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rJMSF012P08+          CTTCAGACAGCTATACTAAAGAATTTCCCAGAACAGAGTACAGTAGTGTTCTTCGGTACT
                      ____________________________________________________________
consensus             CTTCAGACAGCTATACTAAAGAATTTCCCAGAACAGAGTACAGTAGTGTTCTTCGGTACT
 
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rJMSF012P08+          GGCTTTACTAGTATCCAATGCGCAATTGTTTCAGCACTAGTAGAAAGAAAGCTGGATGCT
                      ____________________________________________________________
consensus             GGCTTTACTAGTATCCAATGCGCAATTGTTTCAGCACTAGTAGAAAGAAAGCTGGATGCT
 
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rJMSF012P08+          TGGAAGCTGCAGCCTGGCATTGGAATGGCTGCCATTGTTGCTTCTGCGGTTTTAGAGTCT
                      ____________________________________________________________
consensus             TGGAAGCTGCAGCCTGGCATTGGAATGGCTGCCATTGTTGCTTCTGCGGTTTTAGAGTCT
 
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rJMSF012P08+          CTGTGTAACCAAAATATTAATGCCTTCTGCTTGGACATGAAGGGTCCGCTCTACGTTGCC
                      ____________________________________________________________
consensus             CTGTGTAACCAAAATATTAATGCCTTCTGCTTGGACATGAAGGGTCCGCTCTACGTTGCC
 
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rJMSF012P08+          ATGTTCAAACCCCTGGGAATTGTCATTGCAGCAATTCTGAATCTCCTTTTTCTTGCAGAC
                      ____________________________________________________________
consensus             ATGTTCAAACCCCTGGGAATTGTCATTGCAGCAATTCTGAATCTCCTTTTTCTTGCAGAC
 
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rJMSF012P08+          GCTCTTCATTTAGGCAGAAAGGTGCGGGGAACGGATGCGTTTCTTTTTATTAAACAAAAC
                      ____________________________________________________________
consensus             GCTCTTCATTTAGGCAGAAAGGTGCGGGGAACGGATGCGTTTCTTTTTATTAAACAAAAC
 
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rJMSF012P08+          GACGTTGTTTTGATGTGGGGTGCATGATATAATTTGCCACGAAAAGATATCACTTTACAA
                      ____________________________________________________________
consensus             GACGTTGTTTTGATGTGGGGTGCATGATATAATTTGCCACGAAAAGATATCACTTTACAA
 
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rJMSF012P08+          GCCTCCAAGAAGGTAGAATCTAGGAAATATCTTGCTTTGTATATCCTTGAAACCAAAGAC
                      ____________________________________________________________
consensus             GCCTCCAAGAAGGTAGAATCTAGGAAATATCTTGCTTTGTATATCCTTGAAACCAAAGAC
 
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rJMSF012P08+          TGAGGATTGCTTGATTATATTAGTGTTGGAGAATATTTTAAAGAATATTTTCATGCACTA
                      ____________________________________________________________
consensus             TGAGGATTGCTTGATTATATTAGTGTTGGAGAATATTTTAAAGAATATTTTCATGCACTA