Contig 011277:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018J04Sequence593011277 (10)ref|XP_009608325.1|7e-109PREDICTED: ABC transporter I family member 19-like [Nicotiana tomentosiformis]638011277 (10)emb|CDP03759.1|1e-34unnamed protein product [Coffea canephora]
JMFF026I21Sequence545011277 (10)ref|XP_009608325.1|5e-96PREDICTED: ABC transporter I family member 19-like [Nicotiana tomentosiformis]620011277 (10)emb|CDP03759.1|9e-37unnamed protein product [Coffea canephora]
JMSF012M09Sequence462011277 (10)ref|XP_009608325.1|2e-71PREDICTED: ABC transporter I family member 19-like [Nicotiana tomentosiformis]692011277 (10)emb|CDP03759.1|1e-61unnamed protein product [Coffea canephora]
JMSF019L06Sequence548011277 (10)ref|XP_009608325.1|3e-85PREDICTED: ABC transporter I family member 19-like [Nicotiana tomentosiformis]737011277 (10)ref|XP_009800482.1|6e-98PREDICTED: ABC transporter I family member 19-like [Nicotiana sylvestris]
JMSF045L10Sequence768011277 (10)ref|XP_009608325.1|2e-139PREDICTED: ABC transporter I family member 19-like [Nicotiana tomentosiformis]862011277 (10)ref|XP_009800482.1|1e-129PREDICTED: ABC transporter I family member 19-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF012M09-                                                              GAGGTTGTT
JMSF019L06-                             GGTGTAAACATTCAGTCCCTGGAAGAGGTCGTTGAGGTTGTT
JMFF018J04-                                                                    GTT
JMFF026I21-                                                                    GTT
JMSF045L10-                                                                    GTT
                      ____________________________________________________________
consensus                               GGTGTAAACATTCAGTCCCTGGAAGAGGTCGTTGAGGTTGTT
 
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JMSF012M09-           AGAGAGGAGACTTTACTTCGTAGACTGCTTTATAACACGCCGCCGGAAACCCCATTGATC
JMSF019L06-           AGAGAGGAGACTTTACTTCGTAGACTGCTTTATAACACGCCGCCGGAAACCCCATTGATC
JMFF018J04-           AGAGAGGAGACTTTACTTCGTAGACTGCTTTATAACACGCCGCCGGAAACCCCATTGATC
JMFF026I21-           AGAGAGAAGACTTTACTTCGTAGACTGCTTTATAACACGCCGCCGGAAACCCCATTGATC
JMSF045L10-           AGAGAGGAGACTTTACTTCGTAGACTGCTTTATAACACGCCGCCGGAAACCCCATTGATC
                      ____________________________________________________________
consensus             AGAGAGGAGACTTTACTTCGTAGACTGCTTTATAACACGCCGCCGGAAACCCCATTGATC
 
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JMSF012M09-           GAATACCGGAGGCCGAGGGAAAAAGAGACGAAAATGGCGGCAGAATCAAACAGTATACAA
JMSF019L06-           GAATACCGGAGGCCGAGGGAAAAAGAGACGAAAATGGCGGCAGAATCAAACAGTATACAA
JMFF018J04-           GAATACCGGAGGCCGAGGGAAAAAGAGACGAAAATGGCGGCAGAATCAAACAGTATACAA
JMFF026I21-           GAATACCGGAGGCCGAGGGAAAAAGAGACGAAAATGGCGGCAGAATCAAACAGTATACAA
JMSF045L10-           GAATACCGGAGGCCGAGGGAAAAAGAGACGAAAATGGCGGCAGAATCAAACAGTATACAA
                      ____________________________________________________________
consensus             GAATACCGGAGGCCGAGGGAAAAAGAGACGAAAATGGCGGCAGAATCAAACAGTATACAA
 
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JMSF012M09-           GTGAGTGGCATGCAATTCGGGTACGATTTCCAAACCCCCTTGTTCTTCGACTTCAGCCTC
JMSF019L06-           GTGAGTGGCATGCAATTCGGGTACGATTTCCAAACCCCCTTGTTCTTCGACTTCAGCCTC
JMFF018J04-           GTGAGTGGCATGCAATTCGGGTACGATTTCCAAACCCCCTTGTTCTTCGACTTCAGCCTC
JMFF026I21-           GTGAGTGGCATGCAATTCGGGTACGATTTCCAAACCCCCTTGTTCTTCGACTTCAGCCTC
JMSF045L10-           GTGAGTGGCATGCAATTCGGGTACGATTTCCAAACCCCCTTGTTCTTCGACTTCAGCCTC
                      ____________________________________________________________
consensus             GTGAGTGGCATGCAATTCGGGTACGATTTCCAAACCCCCTTGTTCTTCGACTTCAGCCTC
 
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JMSF012M09-           AAGGTTTCTCCCGGATCTCGATGTCTGCTCGTCGGCGCGAATGGATCCGGGAAGACGACT
JMSF019L06-           AAGGTTTCTCCCGGATCTCGATGTCTGCTCGTCGGCGCGAATGGATCCGGGAAGACGACT
JMFF018J04-           AAGGTTTCTCCCGGATCTCGATGTCTGCTCGTCGGCGCGAATGGATCCGGGAAGACGACT
JMFF026I21-           AAGGTTTCTCCCGGATCTCGATGTCTGCTCGTCGGCGCGAATGGATCCGGGAAGACGACT
JMSF045L10-           AAGGTTTCTCCCGGATCTCGATGTCTGCTCGTCGGCGCGAATGGATCCGGGAAGACGACT
                      ____________________________________________________________
consensus             AAGGTTTCTCCCGGATCTCGATGTCTGCTCGTCGGCGCGAATGGATCCGGGAAGACGACT
 
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JMSF012M09-           CTGCTCAGAATATTGGCGGGGAAGCATTTGGTGGGTGGGAAAGATGTTGTGCGGGTGCTA
JMSF019L06-           CTGCTCAGAATATTGGCGGGGAAGCATTTGGTGGGTGGGAAAGATGTTGTGCGGGTGCTA
JMFF018J04-           CTGCTCAGAATATTGGCGGGGAAGCATTTGGTGGGTGGGAAAGATGTTGTGCGGGTGCTA
JMFF026I21-           CTGCTCAGAATATTGGCGGGGAAGCATTTGGTGGGTGGGAAAGATGTTGTGCGGGTGCTA
JMSF045L10-           CTGCTCAGAATATTGGCGGGGAAGCATTTGGTGGGTGGGAAAGATGTTGTGCGGGTGCTA
rJMSF045L10+                                                    GATGTTGTGCGGGTGCTA
                      ____________________________________________________________
consensus             CTGCTCAGAATATTGGCGGGGAAGCATTTGGTGGGTGGGAAAGATGTTGTGCGGGTGCTA
 
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JMSF012M09-           AATTTTTCAGCTTTCCATGACACACACCTTGTCTGCAGTGGTGACCTAGCCTATCTTGGA
JMSF019L06-           AATTTTTCAGCTTTCCATGACACACACCTTGTCTGCAGTGGTGACCTAGCCTATCTTGGA
JMFF018J04-           AATTTTTCAGCTTTCCATGACACACACCTTGTCTGCAGTGGTGACCTAGCCTATCTTGGA
JMFF026I21-           AATTTTTCAGCTTTCCATGACACACACCTTGTCTGCAGTGGTGACCTAGCCTATCTTGGA
JMSF045L10-           AATTTTTCAGCTTTCCATGACACACACCTTGTCTGCAGTGGTGACCTAGCCTATCTTGGA
rJMSF045L10+          AATTTTTCAGCTTTCCATGACACACACCTTGTCTGCAGTGGTGACCTAGCCTATCTTGGA
                      ____________________________________________________________
consensus             AATTTTTCAGCTTTCCATGACACACACCTTGTCTGCAGTGGTGACCTAGCCTATCTTGGA
 
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JMSF012M09-           GAATCTTGGAGCAAAAACGTTGGCTCTGCTGGGGAAATCCCACTCCAGGGAGACTTCTCA
JMSF019L06-           GAATCTTGGAGCAAAAACGTTGGCTCTGCTGGGGAAATCCCACTCCAGGGAGACTTCTCA
JMFF018J04-           GAATCTTGGAGCAAAAACGTTGGCTCTGCTGGGGAAATCCCACTCCAGGGAGACTTCTCA
JMFF026I21-           GAATCTTGGAGCAAAAACGTTGGCTCTGCTGGGGAAATCCCACTCCAGGGAGACTTCTCA
JMSF045L10-           GAATCTTGGAGCAAAAACGTTGGCTCTGCTGGGGAAATCCCACTCCAGGGAGACTTCTCA
rJMSF019L06+                                                      CCAGGGAGACTTCTCA
rJMSF045L10+          GAATCTTGGAGCAAAAACGTTGGCTCTGCTGGGGAAATCCCACTCCAGGGAGACTTCTCA
                      ____________________________________________________________
consensus             GAATCTTGGAGCAAAAACGTTGGCTCTGCTGGGGAAATCCCACTCCAGGGAGACTTCTCA
 
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JMSF012M09-           GCTGAGCATATGATATTTGGAGTTGATGG                               
JMSF019L06-           GCTGAGCATATGATATTTGGAGTTGATGGAGTTGATCCTATTAGGCGAGAGAAGCTGATT
JMFF018J04-           GCTGAGCATATGATATTTGGAGTTGATGGAGTTGATCCTATTAGGCGAGAGAAGCTGATT
JMFF026I21-           GCTGAGCATATGATATTTGGAGTTGATGGAGTTGATCCTATTAGGCGAGAGAAGCTGATT
JMSF045L10-           GCTGAGCATATGATATTTGGAGTTGATGGAGTTGATCCTATTAGGCGAGAGAAGCTGATT
rJMSF019L06+          GCTGAGCATATGATATTTGGAGTTGATGGAGTTGATCCTATTAGGCGAGAGAAGCTGATT
rJMSF045L10+          GCTGAGCATATGATATTTGGAGTTGATGGAGTTGATCCTATTAGGCGAGAGAAGCTGATT
                      ____________________________________________________________
consensus             GCTGAGCATATGATATTTGGAGTTGATGGAGTTGATCCTATTAGGCGAGAGAAGCTGATT
 
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JMSF019L06-           GAACTGCTAGATATTGATCTCCAATG                                  
JMFF018J04-           GAACTGCTAGATATTGATCTCCAATGGCGGATGCACAAGGTCTCTGATGGTCAGCGGCGT
JMFF026I21-           GAACTGCTAGATATTGATCTCCAATGGCGGATGCACAAGGTCTCTGATGGTCAGCGGCGT
JMSF045L10-           GAACTGCTAGATATTGATCTCCAATGGCGGATGCACAAGGTCTCTGATGGTCAGCGGCGT
rJMSF019L06+          GAACTGCTAGATATTGATCTCCAATGGCGGATGCACAAGGTCTCTGATGGTCAGCGGCGT
rJMSF045L10+          GAACTGCTAGATATTGATCTCCAATGGCGGATGCACAAGGTCTCTGATGGTCAGCGGCGT
rJMSF012M09+                                     CGGATGCACAAGGTNTTTGATGGTCAGCGGCGT
                      ____________________________________________________________
consensus             GAACTGCTAGATATTGATCTCCAATGGCGGATGCACAAGGTCTCTGATGGTCAGCGGCGT
 
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JMFF018J04-           AGAGTGCAGATCTGTATGGGCCTTCTTCATCCCTACAAGGTTCTTTTGCT          
JMFF026I21-           AG                                                          
JMSF045L10-           AGAGTGCAGATCTGTATGGGCCTTCTTCATCCCTACAAGGTTCTTTTGCTAGATGAGGTT
rJMSF019L06+          AGAGTGCAGATCTGTATGGGCCTTCTTCATCCCTACAAGGTTCTTTTGCTAGATGAGGTT
rJMSF045L10+          AGAGTGCAGATCTGTATGGGCCTTCTTCATCCCTACAAGGTTCTTTTGCTAGATGAGGTT
rJMFF026I21+                                         CCTACAAGGTTNTTTTGCTAGATGAGGTT
rJMFF018J04+                       GTATGGGCCTTTTTCATCCCTACAAGGTTNTTTTGCTNGATGAGGTT
rJMSF012M09+          AGAGTGCAGATCTGTATGGGCCTTNTTCATCCCTACAAGGTTCTTTTGCTAGATGAGGTT
                      ____________________________________________________________
consensus             AGAGTGCAGATCTGTATGGGCCTTCTTCATCCCTACAAGGTTCTTTTGCTAGATGAGGTT
 
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JMSF045L10-           ACGGTTGACCTAGATGTTGTTGCGAGGATGGATTTACTTGA-TTTTTTTAAGGAAGAATG
rJMSF019L06+          ACGGTTGACCTAGATGTTGTTGCGAGGATGGATTTACTTGA-TTTTTTTAAGGAAGAATG
rJMSF045L10+          ACGGTTGACCTAGATGTTGTTGCGAGGATGGATTTACTTGA-TTTTTTTAAGGAAGAATG
rJMFF026I21+          ACGGTTGACCTAGATGTTGTTGCGAGGATGGATTTACTTGATTTTTTTTAAGGAAGAATG
rJMFF018J04+          ACGGTTGACCTAGANGTTGTTGCGAGGATGGATTTACTTGATTTTTTTTAAGGAAGAATG
rJMSF012M09+          ACGGTTGACCTAGATGTTGTTGCGAGGATGGATTTACTTGA-TTTTTTTAAGGAAGAATG
                      ____________________________________________________________
consensus             ACGGTTGACCTAGATGTTGTTGCGAGGATGGATTTACTTGA-TTTTTTTAAGGAAGAATG
 
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JMSF045L10-           CGAGCAGAGAGGTGCTACGGTAGTGTATGCAACGCATATATTTGATGGATTAGAGACATG
rJMSF019L06+          CGAGCAGAGAGGTGCTACGGTAGTGTATGCAACGCATATATTTGATGGATTAGAGACATG
rJMSF045L10+          CGAGCAGAGAGGTGCTACGGTAGTGTATGCAACGCATATATTTGATGGATTAGAGACATG
rJMFF026I21+          CGAGCAGAGAGGTGCTACGGTAGTGTATGCAACGCATATNTTTGANGGATTAGAGACATG
rJMFF018J04+          CGAGCAGAGAGGTGCTACGGTAGTGTATGCAACGCATATNTTTGANGGATTAGAGACATG
rJMSF012M09+          CGAGCAGAGAGGTGCTACGGTAGTGTATGCAACGCATATATTTGATGGATTAGAGACATG
                      ____________________________________________________________
consensus             CGAGCAGAGAGGTGCTACGGTAGTGTATGCAACGCATATATTTGATGGATTAGAGACATG
 
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JMSF045L10-           GGCGACAGATCTAGTCTACGTTCAAGATGGCGTTTTGAA                     
rJMSF019L06+          GGCGACAGATCTAGTCTACGTTCAAGATGGCGTTTTGAAGAGGTCCGAGAAGTTATCAGA
rJMSF045L10+          GGCGACAGATCTAGTCTACGTTCAAGATGGCGTTTTGAAGAGGTCCGAGAAGTTATCAGA
rJMFF026I21+          GGNGACAGATTTAGTTTACGTTCAAGATGGCGTTTTGAAGAGGTNCGAGAAGTTATCAGA
rJMFF018J04+          GGCGACAGATTTAGTTTACGTTCAAGATGGCGTTTTGAAGAGGTNCGAGAAGTTATCAGA
rJMSF012M09+          GGNGACAGATTTNGTNTACGTTCAAGANGGCGTTTTGAAGAGGTCCGAGAAGTTATCAGA
                      ____________________________________________________________
consensus             GGCGACAGATCTAGTCTACGTTCAAGATGGCGTTTTGAAGAGGTCCGAGAAGTTATCAGA
 
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rJMSF019L06+          ACTTGCCGAGCTGAAGACTAAGCCCAATTTGCTCTCGGTGGTGGAGACCTGGCTTCGGTC
rJMSF045L10+          ACTTGCCGAGCTGAAGACTAAGCCCAATTTGCTCTCGGTGGTGGAGACCTGGCTTCGGTC
rJMFF026I21+          ACTTGCCGAGGTGAAGANTNANCCCAATTTGNTNTNGGTGGTGGAGACCTGGCTTCGGTN
rJMFF018J04+          ACTTGCCGAGNTGAAGANTNANCCCAATTTGNTNTNGGTGGNGGAGACCTGGCTTCGGTT
rJMSF012M09+          ACTTGCCGAGCTGAAGACTAAGCCCAATTTGCTCTCGGTGGNGGAGACCNGGNTTCGGTT
                      ____________________________________________________________
consensus             ACTTGCCGAGCTGAAGACTAAGCCCAATTTGCTCTCGGTGGTGGAGACCTGGCTTCGGTT
 
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rJMSF019L06+          TGAGACCCCGATCGAGAAAAAGAAAGCCAGCAAGAATCCGAGTGCAGTTAAGACGACATC
rJMSF045L10+          TGAGACCCCGATCGAGAAAAAGAAAGCCAGCAAGAATCCGAGTGCAGTTAAGACGACATC
rJMFF026I21+          TGAGACCCCGATCGAGAAAAAGAAAGCCAGCAAGAATCCGAGTGCAGTTAAGACGACATT
rJMFF018J04+          TGAGNCCCCGATCGNGAAAAAGAAAGCCAGCAAGAATCCGAGTGCAGTTAAGACGACATT
rJMSF012M09+          TGAGACCCCGATCGAGAAAAAGAAAGCCAGCAAGAATCCGAGTGCAGTTAAGNCGACATT
                      ____________________________________________________________
consensus             TGAGACCCCGATCGAGAAAAAGAAAGCCAGCAAGAATCCGAGTGCAGTTAAGACGACATT
 
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rJMSF019L06+          TTCCCCGTTTGATGCTTCTCCCTTTCGCTCGTCTAGACACATGGCGTATTATCGCTGACT
rJMSF045L10+          TTCCCCGTTTGATGCTTCTCCCTTTCGCTCGTCTAGACACATGGCGTATTATCGCTGACT
rJMFF026I21+          TTCCCCGTTTGATGNTTNTCCCTTTNGCTCGTTTANACNCATGGCGTATTATNGNTGANT
rJMFF018J04+          TTCCCCGTTTGATGNTTNTCCCTTTNGCTCGTTTANACNCATGGCGTATTATNGNTGANT
rJMSF012M09+          TTCCCCGTTTGATGCTTNTCCCTTTCGCTNGTCTAGACACATGGNGTATTATCGCTGACT
                      ____________________________________________________________
consensus             TTCCCCGTTTGATGCTTCTCCCTTTCGCTCGTCTAGACACATGGCGTATTATCGCTGACT
 
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rJMSF019L06+          ACCAGTTCCGGGTCTAGCACACAACAATAAGGAGTCATTGCTTGTGACATTTGTTTTTAT
rJMSF045L10+          ACCAGTTCCGGGTCTAGCACACAACAATAAGGAGTCATTGCTTGTGACATTTGTTTTTAT
rJMFF026I21+          ACCNNTTCCGGGTTTAGCNCNCAACAATAAGGAGTCATTGNTTGTGACNNTTGTTTTTAT
rJMFF018J04+          ACCNNTTCCGGGTTTAGCNCNCAACAATAAGGAGTCATTGNTTGNGACNNTTGTTTTTAT
rJMSF012M09+          ACCNGTTCCGGGTNTAGCNCNCAACAATAAGGNGTCNTTGCTTGNGACNTTTGTTTTTAT
                      ____________________________________________________________
consensus             ACCAGTTCCGGGTTTAGCACACAACAATAAGGAGTCATTGCTTGTGACATTTGTTTTTAT
 
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rJMSF019L06+          TCATTTGAGGAAATTGTTTACTATCTCCATACACCATATTGCAGAACTTACAATCTTTCA
rJMSF045L10+          TCATTTGAGGAAATTGTTTACTATCTCCATACACCATATTGCAGAACTTACAATCTTTCA
rJMFF026I21+          TCATTTGAGGAAATTGTTTACTATNTCCATACNCCATATTGCAGAANTTACAATNTTTCA
rJMFF018J04+          TCATTTGAGGAAATTGTTTACTATNTCCATACNCCATATTGCAGAANTTACAATNTTTCA
rJMSF012M09+          TCATTTGAGGAAATTGTTTACTATCTCCATACNCCNTATTGCAGAACTTACAATNTTTCA
                      ____________________________________________________________
consensus             TCATTTGAGGAAATTGTTTACTATCTCCATACACCATATTGCAGAACTTACAATCTTTCA
 
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rJMSF019L06+          TGCCTTACAGCTCTTGTATGTATAACATATATAAACATATCTGGCCTTTAAGGC      
rJMSF045L10+          TGCCTTACAGCTCTTGTATGTATAACATATATAAACATATCTGGCCTTTAAGGCTGTAA 
rJMFF026I21+          TGCCTTACANCTTTTGTATGTATAACNTATATAAACATATNTGGCCTTTAAGGCAGTAAN
rJMFF018J04+          TGCCTTACAGCTTTTGTATGTATAACNTATATAAACATATNTGGCCTTTAAGGCNGTAAN
rJMSF012M09+          TGCCTTACAGCTNTTGTATGTATAACATATATAAACATATNTGGCCNTTAAGGCTGTAAT
                      ____________________________________________________________
consensus             TGCCTTACAGCTTTTGTATGTATAACATATATAAACATATCTGGCCTTTAAGGCTGTAAT
 
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rJMFF026I21+          NTGTCTTGCNTGAAGCTATCAAAANGGAGTAATGTTATGATCCNAAAAAGA         
rJMFF018J04+          TTGTCTTGNNTGANGCTATCAAAATGGAGTAATGTTATGATCCNAAAAAGA         
rJMSF012M09+          TTGTCTTGTTTGATGCTATCAAAATGGAGTAATGTTATGATCCAAAAAAGAAAAAAAAAA
                      ____________________________________________________________
consensus             TTGTCTTGTTTGATGCTATCAAAATGGAGTAATGTTATGATCCAAAAAAGAAAAAAAAAA