Contig 011276:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040H01Sequence507011944 (6)emb|CDP10414.1|2e-75unnamed protein product [Coffea canephora]655011276 (4)ref|XP_004158777.1|1e-99PREDICTED: phospholipase D alpha 1-like [Cucumis sativus]
JMFF047P16Sequence604011944 (6)emb|CDP10414.1|2e-97unnamed protein product [Coffea canephora]516011276 (4)gb|AFX67027.1|3e-66phospholipase D, partial [Solanum tuberosum]
JMSF012L20Sequence375011944 (6)emb|CDP10414.1|1e-21unnamed protein product [Coffea canephora]775011276 (4)ref|XP_004158777.1|2e-107PREDICTED: phospholipase D alpha 1-like [Cucumis sativus]
JMSF022B11Sequence676011944 (6)emb|CDP10414.1|1e-104unnamed protein product [Coffea canephora]761011276 (4)ref|XP_010325101.1|5e-120PREDICTED: phospholipase D alpha 1-like isoform X2 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF022B11+ GGAGGACAATGCAAATGATGTATACTGATATAGTTCAAGCT
                      ____________________________________________________________
consensus GGAGGACAATGCAAATGATGTATACTGATATAGTTCAAGCT
 
. : . : . : . : . : . :
rJMSF022B11+ CTGAAAGCCAAAGGGATCATCGCTAACCCAAAGGACTACTTGAGTTTCTTCTGCCTGGGT
rJMFF040H01+ GGT
rJMSF012L20+ AAGGGATCATCGCTAACCCAANGGACTACTTGAGTTTCTTCTGCCTGGGT
                      ____________________________________________________________
consensus CTGAAAGCCAAAGGGATCATCGCTAACCCAAAGGACTACTTGAGTTTCTTCTGCCTGGGT
 
. : . : . : . : . : . :
rJMSF022B11+ AATAGGGAAACCAAGAAAGGCGACGAATACGAACCTTCTGAGAAACCGGATAATGATACA
rJMFF040H01+ AATAGGGAAACCAAGAAAGGCGACGAATACGAACCTTCTGAGAAACCGGATAATGATACA
rJMSF012L20+ AATAGGGAAACCNAGAAAGGCGACGAATACGAACCTTCTGAGAAACCGGATAATGATACA
                      ____________________________________________________________
consensus AATAGGGAAACCAAGAAAGGCGACGAATACGAACCTTCTGAGAAACCGGATAATGATACA
 
. : . : . : . : . : . :
rJMSF022B11+ GACTACAGCAGGGCTCAGGAAGCCAGGAGGTTCATGATATATGTTCATGCTAAAATGATG
rJMFF040H01+ GACTACAGCAGGGCTCAGGAAGCCAGGAGGTTCATGATATATGTTCATGCTAAAATGATG
rJMSF012L20+ GACTACAGCAGGGCTCAGGAAGCCAGGAGGTTCATGATATATGTTCATGCTAAAATGATG
                      ____________________________________________________________
consensus GACTACAGCAGGGCTCAGGAAGCCAGGAGGTTCATGATATATGTTCATGCTAAAATGATG
 
. : . : . : . : . : . :
rJMSF022B11+ ATAGTTGACGATGAATACATAATCGTAGGATCAGCCAACATAAACCAGAGATCAATGGAC
rJMFF040H01+ ATAGTTGACGATGAATACATAATCGTAGGATCAGCCAACATAAACCAGAGATCAATGGAC
rJMFF047P16+ CATAAACCAGAGATCAATGGAC
rJMSF012L20+ ATAGTTGACGATGAATACATAATCGTAGGATCAGCCAACATAAACCAGAGATCAATGGAC
                      ____________________________________________________________
consensus ATAGTTGACGATGAATACATAATCGTAGGATCAGCCAACATAAACCAGAGATCAATGGAC
 
. : . : . : . : . : . :
rJMSF022B11+ GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
rJMFF040H01+ GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
rJMFF047P16+ GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
rJMSF012L20+ GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
                      ____________________________________________________________
consensus GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
 
. : . : . : . : . : . :
rJMSF022B11+ CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
rJMFF040H01+ CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
rJMFF047P16+ CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
rJMSF012L20+ CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
                      ____________________________________________________________
consensus CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
 
. : . : . : . : . : . :
rJMSF022B11+ ATGTTAGACAACTGCTTCGCCCAGCCGGAGAACATGGAGTGCGTTCTCAAGGTAAACCAA
rJMFF040H01+ ATGTTAGACAACTGCTTCGCCCAGCCGGAGAGCATGGAGTGCGTTCTCAAGGTAAACCAA
rJMFF047P16+ ATGTTAGACAACTGCTTCGCCCAGCCGGAGAGCATGGAGTGCGTTCTCAAGGTAAACCAA
rJMSF012L20+ ATGTTAGACAACTGCTTCGCCCAGCCGGAGAGCATGGAGTGCGTTCTCAAGGTAAACCAA
                      ____________________________________________________________
consensus ATGTTAGACAACTGCTTCGCCCAGCCGGAGAGCATGGAGTGCGTTCTCAAGGTAAACCAA
 
. : . : . : . : . : . :
rJMSF022B11+ ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
rJMFF040H01+ ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
rJMFF047P16+ ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
rJMSF012L20+ ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
                      ____________________________________________________________
consensus ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
 
. : . : . : . : . : . :
rJMSF022B11+ CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
rJMFF040H01+ CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
rJMFF047P16+ CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
rJMSF012L20+ CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
                      ____________________________________________________________
consensus CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
 
. : . : . : . : . : . :
rJMSF022B11+ TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
rJMFF040H01+ TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
rJMFF047P16+ TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
rJMSF012L20+ TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
                      ____________________________________________________________
consensus TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
 
. : . : . : . : . : . :
rJMSF022B11+ CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
rJMFF040H01+ CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
rJMFF047P16+ CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
rJMSF012L20+ CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
                      ____________________________________________________________
consensus CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
 
. : . : . : . : . : . :
rJMSF022B11+ GGTTGCTGGAAGATGAATATATATATATATAATATATATGACTGATACACAATAATT
rJMFF040H01+ GGTTGCTGGAAGATGAATATATATATATATAATATATATGACNGATACACAA
rJMFF047P16+ GGTTGCTGGAAGATGAATATATATATATATAATATATATGACTGATACACAATAATTTAA
rJMSF012L20+ GGTTGCTGGAAGATGAATATATATATATATAATATATATGACTGATACACAATAATTTAA
                      ____________________________________________________________
consensus GGTTGCTGGAAGATGAATATATATATATATAATATATATGACTGATACACAATAATTTAA
 
. : . : . : . : . : . :
rJMFF047P16+ TGGGATTCATATC
rJMSF012L20+ TGGGATTCATATCTAAGCTTTTCGAGTGTTTGCTATATGTATGTATGAAATAAACCATGC
                      ____________________________________________________________
consensus TGGGATTCATATCTAAGCTTTTCGAGTGTTTGCTATATGTATGTATGAAATAAACCATGC