clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF040H01 | Sequence | 507 | 011944 (6) | emb|CDP10414.1| | 2e-75 | unnamed protein product [Coffea canephora] | 655 | 011276 (4) | ref|XP_004158777.1| | 1e-99 | PREDICTED: phospholipase D alpha 1-like [Cucumis sativus] |
JMFF047P16 | Sequence | 604 | 011944 (6) | emb|CDP10414.1| | 2e-97 | unnamed protein product [Coffea canephora] | 516 | 011276 (4) | gb|AFX67027.1| | 3e-66 | phospholipase D, partial [Solanum tuberosum] |
JMSF012L20 | Sequence | 375 | 011944 (6) | emb|CDP10414.1| | 1e-21 | unnamed protein product [Coffea canephora] | 775 | 011276 (4) | ref|XP_004158777.1| | 2e-107 | PREDICTED: phospholipase D alpha 1-like [Cucumis sativus] |
JMSF022B11 | Sequence | 676 | 011944 (6) | emb|CDP10414.1| | 1e-104 | unnamed protein product [Coffea canephora] | 761 | 011276 (4) | ref|XP_010325101.1| | 5e-120 | PREDICTED: phospholipase D alpha 1-like isoform X2 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF022B11+ GGAGGACAATGCAAATGATGTATACTGATATAGTTCAAGCT
____________________________________________________________
consensus GGAGGACAATGCAAATGATGTATACTGATATAGTTCAAGCT
. : . : . : . : . : . :
rJMSF022B11+ CTGAAAGCCAAAGGGATCATCGCTAACCCAAAGGACTACTTGAGTTTCTTCTGCCTGGGT
rJMFF040H01+ GGT
rJMSF012L20+ AAGGGATCATCGCTAACCCAANGGACTACTTGAGTTTCTTCTGCCTGGGT
____________________________________________________________
consensus CTGAAAGCCAAAGGGATCATCGCTAACCCAAAGGACTACTTGAGTTTCTTCTGCCTGGGT
. : . : . : . : . : . :
rJMSF022B11+ AATAGGGAAACCAAGAAAGGCGACGAATACGAACCTTCTGAGAAACCGGATAATGATACA
rJMFF040H01+ AATAGGGAAACCAAGAAAGGCGACGAATACGAACCTTCTGAGAAACCGGATAATGATACA
rJMSF012L20+ AATAGGGAAACCNAGAAAGGCGACGAATACGAACCTTCTGAGAAACCGGATAATGATACA
____________________________________________________________
consensus AATAGGGAAACCAAGAAAGGCGACGAATACGAACCTTCTGAGAAACCGGATAATGATACA
. : . : . : . : . : . :
rJMSF022B11+ GACTACAGCAGGGCTCAGGAAGCCAGGAGGTTCATGATATATGTTCATGCTAAAATGATG
rJMFF040H01+ GACTACAGCAGGGCTCAGGAAGCCAGGAGGTTCATGATATATGTTCATGCTAAAATGATG
rJMSF012L20+ GACTACAGCAGGGCTCAGGAAGCCAGGAGGTTCATGATATATGTTCATGCTAAAATGATG
____________________________________________________________
consensus GACTACAGCAGGGCTCAGGAAGCCAGGAGGTTCATGATATATGTTCATGCTAAAATGATG
. : . : . : . : . : . :
rJMSF022B11+ ATAGTTGACGATGAATACATAATCGTAGGATCAGCCAACATAAACCAGAGATCAATGGAC
rJMFF040H01+ ATAGTTGACGATGAATACATAATCGTAGGATCAGCCAACATAAACCAGAGATCAATGGAC
rJMFF047P16+ CATAAACCAGAGATCAATGGAC
rJMSF012L20+ ATAGTTGACGATGAATACATAATCGTAGGATCAGCCAACATAAACCAGAGATCAATGGAC
____________________________________________________________
consensus ATAGTTGACGATGAATACATAATCGTAGGATCAGCCAACATAAACCAGAGATCAATGGAC
. : . : . : . : . : . :
rJMSF022B11+ GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
rJMFF040H01+ GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
rJMFF047P16+ GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
rJMSF012L20+ GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
____________________________________________________________
consensus GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
. : . : . : . : . : . :
rJMSF022B11+ CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
rJMFF040H01+ CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
rJMFF047P16+ CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
rJMSF012L20+ CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
____________________________________________________________
consensus CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
. : . : . : . : . : . :
rJMSF022B11+ ATGTTAGACAACTGCTTCGCCCAGCCGGAGAACATGGAGTGCGTTCTCAAGGTAAACCAA
rJMFF040H01+ ATGTTAGACAACTGCTTCGCCCAGCCGGAGAGCATGGAGTGCGTTCTCAAGGTAAACCAA
rJMFF047P16+ ATGTTAGACAACTGCTTCGCCCAGCCGGAGAGCATGGAGTGCGTTCTCAAGGTAAACCAA
rJMSF012L20+ ATGTTAGACAACTGCTTCGCCCAGCCGGAGAGCATGGAGTGCGTTCTCAAGGTAAACCAA
____________________________________________________________
consensus ATGTTAGACAACTGCTTCGCCCAGCCGGAGAGCATGGAGTGCGTTCTCAAGGTAAACCAA
. : . : . : . : . : . :
rJMSF022B11+ ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
rJMFF040H01+ ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
rJMFF047P16+ ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
rJMSF012L20+ ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
____________________________________________________________
consensus ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
. : . : . : . : . : . :
rJMSF022B11+ CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
rJMFF040H01+ CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
rJMFF047P16+ CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
rJMSF012L20+ CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
____________________________________________________________
consensus CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
. : . : . : . : . : . :
rJMSF022B11+ TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
rJMFF040H01+ TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
rJMFF047P16+ TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
rJMSF012L20+ TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
____________________________________________________________
consensus TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
. : . : . : . : . : . :
rJMSF022B11+ CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
rJMFF040H01+ CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
rJMFF047P16+ CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
rJMSF012L20+ CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
____________________________________________________________
consensus CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
. : . : . : . : . : . :
rJMSF022B11+ GGTTGCTGGAAGATGAATATATATATATATAATATATATGACTGATACACAATAATT
rJMFF040H01+ GGTTGCTGGAAGATGAATATATATATATATAATATATATGACNGATACACAA
rJMFF047P16+ GGTTGCTGGAAGATGAATATATATATATATAATATATATGACTGATACACAATAATTTAA
rJMSF012L20+ GGTTGCTGGAAGATGAATATATATATATATAATATATATGACTGATACACAATAATTTAA
____________________________________________________________
consensus GGTTGCTGGAAGATGAATATATATATATATAATATATATGACTGATACACAATAATTTAA
. : . : . : . : . : . :
rJMFF047P16+ TGGGATTCATATC
rJMSF012L20+ TGGGATTCATATCTAAGCTTTTCGAGTGTTTGCTATATGTATGTATGAAATAAACCATGC
____________________________________________________________
consensus TGGGATTCATATCTAAGCTTTTCGAGTGTTTGCTATATGTATGTATGAAATAAACCATGC