Contig 011276:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040H01Sequence507011944 (6)emb|CDP10414.1|2e-75unnamed protein product [Coffea canephora]655011276 (4)ref|XP_004158777.1|1e-99PREDICTED: phospholipase D alpha 1-like [Cucumis sativus]
JMFF047P16Sequence604011944 (6)emb|CDP10414.1|2e-97unnamed protein product [Coffea canephora]516011276 (4)gb|AFX67027.1|3e-66phospholipase D, partial [Solanum tuberosum]
JMSF012L20Sequence375011944 (6)emb|CDP10414.1|1e-21unnamed protein product [Coffea canephora]775011276 (4)ref|XP_004158777.1|2e-107PREDICTED: phospholipase D alpha 1-like [Cucumis sativus]
JMSF022B11Sequence676011944 (6)emb|CDP10414.1|1e-104unnamed protein product [Coffea canephora]761011276 (4)ref|XP_010325101.1|5e-120PREDICTED: phospholipase D alpha 1-like isoform X2 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF022B11+                             GGAGGACAATGCAAATGATGTATACTGATATAGTTCAAGCT
                      ____________________________________________________________
consensus                                GGAGGACAATGCAAATGATGTATACTGATATAGTTCAAGCT
 
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rJMSF022B11+          CTGAAAGCCAAAGGGATCATCGCTAACCCAAAGGACTACTTGAGTTTCTTCTGCCTGGGT
rJMFF040H01+                                                                   GGT
rJMSF012L20+                    AAGGGATCATCGCTAACCCAANGGACTACTTGAGTTTCTTCTGCCTGGGT
                      ____________________________________________________________
consensus             CTGAAAGCCAAAGGGATCATCGCTAACCCAAAGGACTACTTGAGTTTCTTCTGCCTGGGT
 
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rJMSF022B11+          AATAGGGAAACCAAGAAAGGCGACGAATACGAACCTTCTGAGAAACCGGATAATGATACA
rJMFF040H01+          AATAGGGAAACCAAGAAAGGCGACGAATACGAACCTTCTGAGAAACCGGATAATGATACA
rJMSF012L20+          AATAGGGAAACCNAGAAAGGCGACGAATACGAACCTTCTGAGAAACCGGATAATGATACA
                      ____________________________________________________________
consensus             AATAGGGAAACCAAGAAAGGCGACGAATACGAACCTTCTGAGAAACCGGATAATGATACA
 
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rJMSF022B11+          GACTACAGCAGGGCTCAGGAAGCCAGGAGGTTCATGATATATGTTCATGCTAAAATGATG
rJMFF040H01+          GACTACAGCAGGGCTCAGGAAGCCAGGAGGTTCATGATATATGTTCATGCTAAAATGATG
rJMSF012L20+          GACTACAGCAGGGCTCAGGAAGCCAGGAGGTTCATGATATATGTTCATGCTAAAATGATG
                      ____________________________________________________________
consensus             GACTACAGCAGGGCTCAGGAAGCCAGGAGGTTCATGATATATGTTCATGCTAAAATGATG
 
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rJMSF022B11+          ATAGTTGACGATGAATACATAATCGTAGGATCAGCCAACATAAACCAGAGATCAATGGAC
rJMFF040H01+          ATAGTTGACGATGAATACATAATCGTAGGATCAGCCAACATAAACCAGAGATCAATGGAC
rJMFF047P16+                                                CATAAACCAGAGATCAATGGAC
rJMSF012L20+          ATAGTTGACGATGAATACATAATCGTAGGATCAGCCAACATAAACCAGAGATCAATGGAC
                      ____________________________________________________________
consensus             ATAGTTGACGATGAATACATAATCGTAGGATCAGCCAACATAAACCAGAGATCAATGGAC
 
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rJMSF022B11+          GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
rJMFF040H01+          GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
rJMFF047P16+          GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
rJMSF012L20+          GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
                      ____________________________________________________________
consensus             GGCGCGCGCGACTCAGAAATCGCGATGGGAGCATACCAGCCGCACCACCTATCTGCGAGG
 
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rJMSF022B11+          CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
rJMFF040H01+          CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
rJMFF047P16+          CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
rJMSF012L20+          CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
                      ____________________________________________________________
consensus             CAGCCAGCGAGGGGGCAGGTACACGGGTTCCGAATGGCGCTGTGGTACGAGCATCTGGGC
 
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rJMSF022B11+          ATGTTAGACAACTGCTTCGCCCAGCCGGAGAACATGGAGTGCGTTCTCAAGGTAAACCAA
rJMFF040H01+          ATGTTAGACAACTGCTTCGCCCAGCCGGAGAGCATGGAGTGCGTTCTCAAGGTAAACCAA
rJMFF047P16+          ATGTTAGACAACTGCTTCGCCCAGCCGGAGAGCATGGAGTGCGTTCTCAAGGTAAACCAA
rJMSF012L20+          ATGTTAGACAACTGCTTCGCCCAGCCGGAGAGCATGGAGTGCGTTCTCAAGGTAAACCAA
                      ____________________________________________________________
consensus             ATGTTAGACAACTGCTTCGCCCAGCCGGAGAGCATGGAGTGCGTTCTCAAGGTAAACCAA
 
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rJMSF022B11+          ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
rJMFF040H01+          ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
rJMFF047P16+          ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
rJMSF012L20+          ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
                      ____________________________________________________________
consensus             ATAGCAGAAAATAACTGGAACCTCTACTCCGGCGAGACGTTGGAGCGCGACATGCCTGCC
 
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rJMSF022B11+          CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
rJMFF040H01+          CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
rJMFF047P16+          CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
rJMSF012L20+          CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
                      ____________________________________________________________
consensus             CATTTGCTCAGCTACCCCATCGGAGTCACTGAAAATGGACAGGTAACTGAGCTGCCTGGG
 
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rJMSF022B11+          TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
rJMFF040H01+          TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
rJMFF047P16+          TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
rJMSF012L20+          TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
                      ____________________________________________________________
consensus             TTTCAAAATTTCCCCGATACAAAGGCGCCAGTTCTTGGAACCAAATCCAATTTTCTTCCT
 
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rJMSF022B11+          CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
rJMFF040H01+          CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
rJMFF047P16+          CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
rJMSF012L20+          CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
                      ____________________________________________________________
consensus             CCAATCCTCACTACTTGAACTCCGATCCTCAGATCAGATCAGTTGTTTGTTTTATTTTAT
 
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rJMSF022B11+          GGTTGCTGGAAGATGAATATATATATATATAATATATATGACTGATACACAATAATT   
rJMFF040H01+          GGTTGCTGGAAGATGAATATATATATATATAATATATATGACNGATACACAA        
rJMFF047P16+          GGTTGCTGGAAGATGAATATATATATATATAATATATATGACTGATACACAATAATTTAA
rJMSF012L20+          GGTTGCTGGAAGATGAATATATATATATATAATATATATGACTGATACACAATAATTTAA
                      ____________________________________________________________
consensus             GGTTGCTGGAAGATGAATATATATATATATAATATATATGACTGATACACAATAATTTAA
 
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rJMFF047P16+          TGGGATTCATATC                                               
rJMSF012L20+          TGGGATTCATATCTAAGCTTTTCGAGTGTTTGCTATATGTATGTATGAAATAAACCATGC
                      ____________________________________________________________
consensus             TGGGATTCATATCTAAGCTTTTCGAGTGTTTGCTATATGTATGTATGAAATAAACCATGC