| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF017G18 | Sequence | 584 | 004529 (5) | ref|XP_006845995.1| | 5e-92 | hypothetical protein AMTR_s00155p00051130 [Amborella trichopoda] gb|ERN07670.1| | 743 | 011269 (5) | gb|KDO75234.1| | 2e-140 | hypothetical protein CISIN_1g015465mg [Citrus sinensis] |
| JMFF027L02 | Sequence | 553 | 004529 (5) | ref|XP_006845995.1| | 5e-85 | hypothetical protein AMTR_s00155p00051130 [Amborella trichopoda] gb|ERN07670.1| | 717 | 011269 (5) | gb|KDO75234.1| | 1e-134 | hypothetical protein CISIN_1g015465mg [Citrus sinensis] |
| JMSF011C12 | Sequence | 279 | 004529 (5) | gb|AAF65513.1| | 2e-20 | GTP-binding protein [Capsicum annuum] | 806 | 011269 (5) | gb|KDO75234.1| | 1e-121 | hypothetical protein CISIN_1g015465mg [Citrus sinensis] |
| JMSF011D18 | Sequence | 353 | 004529 (5) | ref|XP_004231561.1| | 2e-38 | PREDICTED: obg-like ATPase 1 [Solanum lycopersicum] | 767 | 011269 (5) | gb|KDO75234.1| | 4e-118 | hypothetical protein CISIN_1g015465mg [Citrus sinensis] |
| JMSF051I08 | Sequence | 621 | 004529 (5) | ref|XP_004231561.1| | 6e-108 | PREDICTED: obg-like ATPase 1 [Solanum lycopersicum] | 693 | 011269 (5) | gb|KDO75234.1| | 3e-110 | hypothetical protein CISIN_1g015465mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
rJMFF027L02+ AGGTCAAAACATCTCTTGAT
rJMFF017G18+ AAAATAGAACATGAACTGTGTCTGAAGGTCAAAACATCTCTTGAT
____________________________________________________________
consensus AAAATAGAACATGAACTGTGTCTGAAGGTCAAAACATCTCTTGAT
. : . : . : . : . : . :
rJMFF027L02+ GAGGGTAAAGATGCCCGTCTGGGGGAATGGAAAGCTGCTGACATTGAGATATTGAATACT
rJMFF017G18+ GAGGGTAAAGATGCCCGTCTGGGGGAATGGAAAGCTGCTGACATTGAGATATTGAATACT
____________________________________________________________
consensus GAGGGTAAAGATGCCCGTCTGGGGGAATGGAAAGCTGCTGACATTGAGATATTGAATACT
. : . : . : . : . : . :
rJMFF027L02+ TTTCAGTTGCTTACTGCAAAACCTGTTGTTTATTTGGTTAACATGAATGAGAAAGATTAT
rJMFF017G18+ TTTCAGTTGCTTACTGCAAAACCTGTTGTTTATTTGGTTAACATGAATGAGAAAGATTAT
rJMSF051I08+ TGGTTAACATGAATGAGAAAGATTAT
rJMSF011D18+ GTGCTTACTGCAAAACCTGTTGTTTATTTGGTTAACATGAATGAGAAAGATTAT
rJMSF011C12+ GTGCTTACTGCAAAACCTGTTGTTTATTTGGTTAACATGAATGAGAAAGATTAT
____________________________________________________________
consensus TTTCAGTTGCTTACTGCAAAACCTGTTGTTTATTTGGTTAACATGAATGAGAAAGATTAT
. : . : . : . : . : . :
rJMFF027L02+ CAACGGAAAAAGAACAAGTTCCTTCCTAAGATTCATGCTTGGGTGCAAGAGCATGGTGGC
rJMFF017G18+ CAACGGAAAAAGAACAAGTTCCTTCCTAAGATTCATGCTTGGGTGCAAGAGCATGGTGGC
rJMSF051I08+ CAACGGAAAAAGAACAAGTTCCTTCCTAAGATTCATGCTTGGGTGCAAGAGCATGGTGGC
rJMSF011D18+ CAACGGAAAAAGAACAAGTTCCTTCCTAAGATTCATGCTTGGGTGCAAGAGCATGGTGGC
rJMSF011C12+ CAACGGAAAAAGAACAAGTTCCTTCCTAAGATTCATGCTTGGGTGCAAGAGCATGGTGGC
____________________________________________________________
consensus CAACGGAAAAAGAACAAGTTCCTTCCTAAGATTCATGCTTGGGTGCAAGAGCATGGTGGC
. : . : . : . : . : . :
rJMFF027L02+ GAACTCATTATTCCTTTCAGTGCTGCTTTGGAAAGGAGTCTTGCTGATATGCCACCTGAT
rJMFF017G18+ GAACTCATTATTCCTTTCAGTGCTGCTTTGGAAAGGAGTCTTGCTGATATGCCACCTGAT
rJMSF051I08+ GAACTCATTATTCCTTTCAGTGCTGCTTTGGAAAGGAGTCTTGCTGATATGCCACCTGAT
rJMSF011D18+ GAACTCATTATTCCTTTCAGTGCTGCTTTGGAAAGGAGTCTTGCTGATATGCCACCTGAT
rJMSF011C12+ GAACTCATTATTCCTTTCAGTGCTGCTTTGGAAAGGAGTCTTGCTGATATGCCACCTGAT
____________________________________________________________
consensus GAACTCATTATTCCTTTCAGTGCTGCTTTGGAAAGGAGTCTTGCTGATATGCCACCTGAT
. : . : . : . : . : . :
rJMFF027L02+ GAAGCTGCAAAGTATTGTGAGGAGAACAAGGTTCAAAGTGCCCTTCCAAAAATCATAAAG
rJMFF017G18+ GAAGCTGCAAAGTATTGTGAGGAGAACAAGGTTCAAAGTGCCCTTCCAAAAATCATAAAG
rJMSF051I08+ GAAGCTGCAAAGTATTGTGAGGAGAACAAGGTTCAAAGTGCCCTTCCAAAAATCATAAAG
rJMSF011D18+ GAAGCTGCAAAGTATTGTGAGGAGAACAAGGTTCAAAGTGCCCTTCCAAAAATCATAAAG
rJMSF011C12+ GAAGCTGCAAAGTATTGTGAGGAGAACAAGGTTCAAAGTGCCCTTCCAAAAATCATAAAG
____________________________________________________________
consensus GAAGCTGCAAAGTATTGTGAGGAGAACAAGGTTCAAAGTGCCCTTCCAAAAATCATAAAG
. : . : . : . : . : . :
rJMFF027L02+ ACTGGATTTTCTGCAATTAATCTCATATATTTCTTCACAGCTGGGCCAGATGAGGTTAAA
rJMFF017G18+ ACTGGATTTTCTGCAATTAATCTCATATATTTCTTCACAGCTGGGCCAGATGAGGTTAAA
rJMSF051I08+ ACTGGATTTTCTGCAATTAATCTCATATATTTCTTCACAGCTGGGCCAGATGAGGTTAAA
rJMSF011D18+ ACTGGATTTTCTGCAATTAATCTCATATATTTCTTCACAGCTGGGCCAGATGAGGTTAAA
rJMSF011C12+ ACTGGATTTTCTGCAATTAATCTCATATATTTCTTCACAGCTGGGCCAGATGAGGTTAAA
____________________________________________________________
consensus ACTGGATTTTCTGCAATTAATCTCATATATTTCTTCACAGCTGGGCCAGATGAGGTTAAA
. : . : . : . : . : . :
rJMFF027L02+ TGCTGGCAAATTCGCCGCCAGACAAAGGCTCCTCAAGCTGCAGGAGCAATTCATACTGAT
rJMFF017G18+ TGCTGGCAAATTCGCCGCCAGACAAAGGCTCCTCAAGCTGCAGGAGCAATTCATACTGAT
rJMSF051I08+ TGCTGGCAAATTCGCCGCCAGACAAAGGCTCCTCAAGCTGCAGGAGCAATTCATACTGAT
rJMSF011D18+ TGCTGGCAAATTCGCCGCCAGACAAAGGCTCCTCAAGCTGCAGGAGCAATTCATACTGAT
rJMSF011C12+ TGCTGGCAAATTCGCCGCCAGACAAAGGCTCCTCAAGCTGCAGGAGCAATTCATACTGAT
____________________________________________________________
consensus TGCTGGCAAATTCGCCGCCAGACAAAGGCTCCTCAAGCTGCAGGAGCAATTCATACTGAT
. : . : . : . : . : . :
rJMFF027L02+ TTAGAGAGAGGATTCATTTGTGCTGAGGTCATGAAATTTGAAGATCTAAAGGAACTTGGT
rJMFF017G18+ TTAGAGAGAGGATTCATTTGTGCTGAGGTCATGAAATTTGAAGATCTAAAGGAACTTGGT
rJMSF051I08+ TTTGAGAGAGGATTCATTTGTGCTGAGGTCATGAAATTTGAAGATCTAAAGGAACTTGGT
rJMSF011D18+ TTTGAGAGAGGATTCATTTGTGCTGAGGTCATGAAATTTGAAGATCTAAAGGAACTTGGT
rJMSF011C12+ TTTGAGAGAGGATTCATTTGTGCTGAGGTCATGAAATTTGAAGATCTAAAGGAACTTGGT
____________________________________________________________
consensus TTTGAGAGAGGATTCATTTGTGCTGAGGTCATGAAATTTGAAGATCTAAAGGAACTTGGT
. : . : . : . : . : . :
rJMFF027L02+ AGTGAGCCTGCTGTTAAGGCTGGTGGAAAGTATAGGCAGGAGGGAAAGACATATGTGGTC
rJMFF017G18+ AGTGAGCCTGCTGTTAAGGCTGGTGGAAAGTATAGGCAGGAGGGAAAGACATATGTGGTC
rJMSF051I08+ AGTGAGCCTGCTGTTAAGGCTGGTGGAAAGTATAGGCAGGAGGGAAAGACATATGTGGTC
rJMSF011D18+ AGTGAGCCTGCTGTTAAGGCTGGTGGAAAGTATAGGCAGGAGGGAAAGACATATGTGGTC
rJMSF011C12+ AGTGAGCCTGCTGTTAAGGCTGGTGGAAAGTATAGGCAGGAGGGAAAGACATATGTGGTC
____________________________________________________________
consensus AGTGAGCCTGCTGTTAAGGCTGGTGGAAAGTATAGGCAGGAGGGAAAGACATATGTGGTC
. : . : . : . : . : . :
rJMFF027L02+ CAAGATGGAGATGTAATATTCTTCAAGTTCAATGTTTCCGGGGGAGGGAAGAAGTAAGTT
rJMFF017G18+ CAAGATGGAGATGTAATATTCTTCAAGTTCAATGTTTCCGGGGGAGGGAAGAAGTAAGTT
rJMSF051I08+ CAAGATGGAGATGTAATATTCTTCAAGTTCAATGTTTCCGGGGGAGGGAAGAAGTAAGTT
rJMSF011D18+ CAAGATGGAGATGTAATATTCTTCAAGTTCAATGTTTCCGGGGGAGGGAAGAAGTAAGTT
rJMSF011C12+ CAAGATGGAGATGTAATATTCTTCAAGTTCAATGTTTCCGGGGGAGGGAAGAAGTAAGTT
____________________________________________________________
consensus CAAGATGGAGATGTAATATTCTTCAAGTTCAATGTTTCCGGGGGAGGGAAGAAGTAAGTT
. : . : . : . : . : . :
rJMFF027L02+ CTATCTGCACTCGTTTACTTATAAGACAGTACTATTTTGTTCGTTGAGTGAAGAAGTGAT
rJMFF017G18+ CTATCTGCACTCGTTTACTTATAAGACAGTACTATTTTGTTCGTTGAGTGAAGAAGTGAT
rJMSF051I08+ CTATCTGCACTCGTTTACTTATAAGACAGTACTATTTTGTTCGTTGAGTGAAGAAGTGAT
rJMSF011D18+ CTATCTGCACTCGTTTACTTATAAGACAGTACTATTTTGTTCGTTGAGTGAAGAAGTGAT
rJMSF011C12+ CTATCTGCACTCGTTTACTTATAAGACAGTACTATTTTGTTCGATGAGTGAAGAAGTGAT
____________________________________________________________
consensus CTATCTGCACTCGTTTACTTATAAGACAGTACTATTTTGTTCGTTGAGTGAAGAAGTGAT
. : . : . : . : . : . :
rJMFF027L02+ ATTTGTATCTTCAACAAGCCTTGAGGCAGCAGATTCA
rJMFF017G18+ ATTTGTATCTTCAACAAGCCTTGAGGCAGCAGATTCAA
rJMSF051I08+ ATTTGTATCTTCAACAAGCCTTGAGGCAGCAGATTCAATGATTTAATACTTTTTGTTCAG
rJMSF011D18+ ATTTGTATCTTCAACAAGCCTTGAGGCAGCAGATTCAATGATTTAATACTTTTTGTTCAG
rJMSF011C12+ ATTTGTATCTTCAACAAGCCTTGAGGCAGCAGATTCAATGATTTAATACTTTTTGTTCAG
____________________________________________________________
consensus ATTTGTATCTTCAACAAGCCTTGAGGCAGCAGATTCAATGATTTAATACTTTTTGTTCAG
. : . : . : . : . : . :
rJMSF051I08+ TATTAGCAGTGGAAGCCTTTAGATATGTTCCCTACTTTCACACTTCCTCTACTGTTATGG
rJMSF011D18+ TATTAGCAGTGGAAGCCTTTAGATATGTTCCCTACTTTCACACTTCCTCTACTGTTATGG
rJMSF011C12+ TATTAGCAGTGGAAGCCTTTAGATATGTTCCCTACTTTCACACTTCCTCTACTGTTATGG
____________________________________________________________
consensus TATTAGCAGTGGAAGCCTTTAGATATGTTCCCTACTTTCACACTTCCTCTACTGTTATGG
. : . : . : . : . : . :
rJMSF051I08+ GGATTTT
rJMSF011D18+ GGATTTTTGGGTCTCCTT
rJMSF011C12+ GGATTTTTGGGTCTCCTTTGATTGTTATACTAACTTGATAGTGAGATTTTCGCTATGATC
____________________________________________________________
consensus GGATTTTTGGGTCTCCTTTGATTGTTATACTAACTTGATAGTGAGATTTTCGCTATGATC