| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF011A10 | Sequence | 214 | 011268 (7) | ref|XP_006359139.1| | 2e-20 | PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Sol | 733 | 011268 (7) | ref|XP_006359139.1| | 5e-47 | PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Sol |
| JMSF017M09 | Sequence | 468 | 011268 (7) | ref|XP_006359139.1| | 2e-40 | PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Sol | 696 | 011268 (7) | ref|XP_006359139.1| | 2e-47 | PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Sol |
| JMSF019M09 | Sequence | 464 | 011268 (7) | ref|XP_009770685.1| | 4e-15 | PREDICTED: protein YLS3-like [Nicotiana sylvestris] | |||||
| JMSF036M07 | Sequence | 694 | 011268 (7) | ref|XP_006359139.1| | 3e-47 | PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Sol | 646 | 011268 (7) | ref|XP_006359139.1| | 3e-50 | PREDICTED: non-specific lipid-transfer protein-like protein At2g13820-like [Sol |
This contig is upended
. : . : . : . : . : . :
JMSF017M09- GACTCAAGCAAGAAACTC
JMSF036M07- GCAAGAAACTC
JMSF011A10- GCAAGAAACTC
rJMSF017M09+ GCAAGAAACTC
rJMSF011A10+ GCAAGAAACTC
____________________________________________________________
consensus GACTCAAGCAAGAAACTC
. : . : . : . : . : . :
JMSF017M09- GATCAAGAGATGAAAATCCGAACAATTAACGTATTGTTGATCCTGGTGTTTCTAGCCGGC
JMSF036M07- GATCAAGAGATGAAAATCCGAACAATTAACGTATTGTTGATCCTGGTGTTTCTAGCCGGC
JMSF011A10- GATCAAGAGATGAAAATCCGAACAATTAACGTATTGTTGATCCTGGTGTTTCTAGCCGGC
rJMSF017M09+ GATCAAGAGATGAAAATCCGAACAATTAACGTATTGTTGATCCTGGTGTTTCTAGCCGGC
rJMSF036M07+ GGC
rJMSF011A10+ GATCAAGAGATGAAAATCCGAACAATTAACGTATTGTTGATCCTGGTGTTTCTAGCCGGC
____________________________________________________________
consensus GATCAAGAGATGAAAATCCGAACAATTAACGTATTGTTGATCCTGGTGTTTCTAGCCGGC
. : . : . : . : . : . :
JMSF017M09- GGTGCGAACTCCGATACATCCAAGGACAAGGAGGAGTGCACGGAGTCGTTGTTGGGGCTA
JMSF036M07- GGTGCGAACTCCGATACATCCAAGGACAAGGAGGAGTGCACGGAGTCGTTGTTGGGGCTA
JMSF011A10- GGTGCGAACTCCGATACATCCAAGGACAAGGAGGAGTGCACGGAGTCGTTGTTGGGGCTA
rJMSF017M09+ GGTGCGAACTCCGATACATCCAAGGACAAGGAGGAGTGCACGGAGTCGTTGTTGGGGCTA
rJMSF036M07+ GGTGCGAACTCCGATACATCCAAGGACAAGGAGGAGTGCACGGAGTCGTTGTTGGGGCTA
rJMSF011A10+ GGTGCGAACTCCGATACATCCAAGGACAAGGAGGAGTGCACGGAGTCGTTGTTGGGGCTA
____________________________________________________________
consensus GGTGCGAACTCCGATACATCCAAGGACAAGGAGGAGTGCACGGAGTCGTTGTTGGGGCTA
. : . : . : . : . : . :
JMSF017M09- GCGACGTGCCTGCCGTACGTGGGGGGCAACGCGCCGTCGCCAACCCCAGACTGCTGCAAC
rJMSF019M09+ ACCCCAGACTGNTGCAAC
JMSF036M07- GCGACGTGCCTGCCGTACGTGGGGGGCAACGCGCCGTCGCCAACCCCAGACTGCTGCAAC
JMSF011A10- GCGACGTGCCTGCCGTACGTGGGGGGCAACGCGCCGTCGCCAACCCCAGACTGCTGCAAC
rJMSF017M09+ GCGACGTGCCTGCCGTACGTGGGGGGCAACGCGCCGTCGCCAACCCCAGACTGCTGCAAC
rJMSF036M07+ GCGACGTGCCTGCCGTACGTGGGGGGCAACGCGCCGTCGCCAACCCCAGACTGCTGCAAC
rJMSF011A10+ GCGACGTGCCTGCCGTACGTGGGGGGCAACGCGCCGTCGCCAACCCCAGACTGCTGCAAC
____________________________________________________________
consensus GCGACGTGCCTGCCGTACGTGGGGGGCAACGCGCCGTCGCCAACCCCAGACTGCTGCAAC
. : . : . : . : . : . :
JMSF017M09- GGATTGAAGCAAGTGTTGAAGAGCAGCAAGAAGTGTCTGTGTCTCCTCATCAAAGACAGG
rJMSF019M09+ GGATTGAAGCAAGTGTTGAAGAGCAGCAAGAAGTGTCTGTGTCTCCTCATCAAAGACAGG
JMSF036M07- GGATTGAAGCAAGTGTTGAAGAGCAGCAAGAAGTGTCTGTGTCTCCTCATCAAAGACAGG
JMSF011A10- GGATTGAAGCAAGTGTTGAA
rJMSF017M09+ GGATTGAAGCAAGTGTTGAAGAGCAGCAAGAAGTGTCTGTGTCTCCTCATCAAAGACAGG
rJMSF036M07+ GGATTGAAGCAAGTGTTGAAGAGCAGCAAGAAGNGTCTGNGTCTCCTCATCAAAGACAGG
rJMSF011A10+ GGATTGAAGCAAGTGTTGAAGAGCAGCAAGAAGTGTCTGTGTCTCCTCATCAAAGACAGG
____________________________________________________________
consensus GGATTGAAGCAAGTGTTGAAGAGCAGCAAGAAGTGTCTGTGTCTCCTCATCAAAGACAGG
. : . : . : . : . : . :
JMSF017M09- AATGACCCACAGTTGGGGCTCAGCCTCAACCTCACGCTTGCCTTGGGTCTCCCTGATGCT
rJMSF019M09+ AATGACCCACAGTTGGGGCTCAGCCTCAACCTCACGCTTGCCTTGGGTCTCCCTGATGCT
JMSF036M07- AATGACCCACAGTTGGGGCTCAGCCTCAACCTCACGCTTGCCTTGGGTCTCCCTGATGCT
rJMSF017M09+ AATGACCCACAGTTGGGGCTCAGCCTCAACCTCACGCTTGCCTTGGGTCTCCCTGATGCT
rJMSF036M07+ AATGACCCACAGTTGGGGCTCAGCCTCAACNTCACGCTTGCCTNGGGTCTCCCTGATGCT
rJMSF011A10+ AATGACCCACAGTTGGGGCTCAGCCTCAACCTCACGCTTGCCTTGGGTCTCCCTGATGCT
____________________________________________________________
consensus AATGACCCACAGTTGGGGCTCAGCCTCAACCTCACGCTTGCCTTGGGTCTCCCTGATGCT
. : . : . : . : . : . :
JMSF017M09- TGCCATGCCCCATCCAACATTTCTGAGTGTCCCGCTCTGCTCCATTTGCCTCCCAAGTCA
rJMSF019M09+ TNCCATGCCCCATCCAACATTTCNGAGTGTCCCGCTCTGCTCCATTTGCCTCCCAAGTCA
JMSF036M07- TGCCATGCCCCATCCAACATTTCTGAGTGTCCCGCTCTGCTCCATTTGCCTCCCAAGTCA
rJMSF017M09+ TGCCATGCCCCATCCAACATTTCTGAGTGTCCCGCTCTGCTCCATTTGCCTCCCAAGTCA
rJMSF036M07+ TGCCATGCCCCATCCAACATTTCTGAGTGTCCCGCTCTGCTCCATTTGCCTCCCAAGTCA
rJMSF011A10+ TGCCATGCCCCATCCAACATTTCTGAGTGTCCCGCTCTGCTCCATTTGCCTCCCAAGTCA
____________________________________________________________
consensus TGCCATGCCCCATCCAACATTTCTGAGTGTCCCGCTCTGCTCCATTTGCCTCCCAAGTCA
. : . : . : . : . : . :
JMSF017M09- CCGGATGCTCAAGTTTTCTATCAATTTGGTCATGCAAGTAGCCCTGCTCATACTCCCATT
rJMSF019M09+ CCGGATGCTCAAGTTTTNTATCAATTTGGTCATGCAAGTAGCCCTGNTCATNCTCCCATT
JMSF036M07- CCGGATGCTCAAGTTTTCTATCAATTTGGTCATGCAAGTAGCCCTGCTCATACTCCCATT
rJMSF017M09+ CCGGATGCTCAAGTTTTCTATCAATTTGGTCATGCAAGTAGCCCTGCTCATACTCCCATT
rJMSF036M07+ CCGGATGCTCAAGTTTTNNATCAATTTGGTCATGCAAGTAGCCCTGCTCATACTCCCATT
rJMSF011A10+ CCGGATGCTCAAGTTTTCTATCAATTTGGTCATGCAAGTAGCCCTGCTCATACTCCCATT
____________________________________________________________
consensus CCGGATGCTCAAGTTTTCTATCAATTTGGTCATGCAAGTAGCCCTGCTCATACTCCCATT
. : . : . : . : . : . :
JMSF017M09- CCTTCAGAAGGCGGTCCTGCAAGTGCGCCA
rJMSF019M09+ CCTTCAGAAGGCGGTCCTGCAAGTGCGCCACAAAAGAGTGGCGGTCGTCGNNGCATTGGA
JMSF036M07- CCTTCAGAAGGCGGTCCTGCAAGTGCGCCACAAAAGAGTGGCGGTCGTCGTTGCATTGGA
rJMSF017M09+ CCTTCAGAAGGCGGTCCTGCAAGTGCGCCACAAAAGAGTGGCGGTCGTCGTTGCATTGGA
rJMSF036M07+ CCTTCAGAAGGCGGTCCTGCAAGTGCGCCACAAAAGAGTGGCGGTCGTCGTTGCATTGGA
rJMSF011A10+ CCTTCAGAAGGCGGTCCTGCAAGTGCGCCACAAAAGAGTGGCGGTCGTCGTTGCATTGGA
____________________________________________________________
consensus CCTTCAGAAGGCGGTCCTGCAAGTGCGCCACAAAAGAGTGGCGGTCGTCGTTGCATTGGA
. : . : . : . : . : . :
rJMSF019M09+ AGAACATGGTTGGCTTTGGAACCTGTTCTTCCACTTTCTGGATTAGTCNTNNTATGGACT
JMSF036M07- AGAACATGGTTGGCTTTGGAAACTGTTCTTCCACTTTCTGGATTAGTCTTACTATGGACT
rJMSF017M09+ AGAACATGGTTGGCTTTGGAAACTGTTCTTCCACTTTCTGGATTAGTCTTACTATGGACT
rJMSF036M07+ AGAACATGGTTGGCTTTGGAAACTGTTCTTCCACTNTCTGGATTAGTCTTACTATGGACT
rJMSF011A10+ AGAACATGGTTGGCTTTGGAAACTGTTCTTCCACTTTCTGGATTAGTCTTACTATGGACT
____________________________________________________________
consensus AGAACATGGTTGGCTTTGGAAACTGTTCTTCCACTTTCTGGATTAGTCTTACTATGGACT
. : . : . : . : . : . :
rJMSF019M09+ TACACAATATAAAACCTNTAATTTCCAGAAATTATGAGTNAATNGTTCGAGATATGTTAG
JMSF036M07- TACACAATATAAAACCTTTAATTTCCAGAAATTATGAGTCTTT-GTTCGAGATATGTTAG
rJMSF017M09+ TACACAATATAAAACCTTTAATTTCCAGAAATTATGAGTCTTT-GTTCGAGATATGTTAG
rJMSF036M07+ TACACAATATAAAACCTTTAATTTCCAGAAATTATGAGTCTTT-GTTCGAGATATGTTAG
rJMSF011A10+ TACACAATATAAAACCTTTAATTTCCAGAAATTATGAGTCTTT-GTTCGAGATATGTTAG
____________________________________________________________
consensus TACACAATATAAAACCTTTAATTTCCAGAAATTATGAGTCTTT-GTTCGAGATATGTTAG
. : . : . : . : . : . :
rJMSF019M09+ GTTCCTGTATGATCCGATCCAAGTCA
JMSF036M07- GTTCCTGTATGATCCGATCCAAGTCATAAAGTTTAATTTATTTTGCATTTTATTTTGTGT
rJMSF017M09+ GTTCCTGTATGATCCGATCCAAGTCATAAAGTTTAATTTATTTTGCATTTTATTTTGTGT
rJMSF036M07+ GTTCCTGTATGATCCGATCCAAGTCATAAAGTTTAATTTATTTTGCATTTTATTTTGTGT
rJMSF011A10+ GTTCCTGTATGATCCGATCCAAGTCATAAAGTTTAATTTATTTTGCATTTTATTTTGTGT
____________________________________________________________
consensus GTTCCTGTATGATCCGATCCAAGTCATAAAGTTTAATTTATTTTGCATTTTATTTTGTGT
. : . : . : . : . : . :
JMSF036M07- AATAAACTCTGTCCCCTCT
rJMSF017M09+ AATAAACTCTGTCCCCTCT
rJMSF036M07+ AATAAACTCTGTCCCCTCTTGTGTTTCATTTGGTCTCGTTTA
rJMSF011A10+ AATAAACTCTGTCCCCTCTTGTGTTTCATTTGGTCTCGTTTACTTAATATACTCTTATAT
____________________________________________________________
consensus AATAAACTCTGTCCCCTCTTGTGTTTCATTTGGTCTCGTTTACTTAATATACTCTTATAT