Contig 011267:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010O15Sequence201009428 (2)ref|XP_009778681.1|3e-23PREDICTED: early nodulin-75-like isoform X1 [Nicotiana sylvestris]779011267 (2)gb|KDP27856.1|8e-17hypothetical protein JCGZ_18936 [Jatropha curcas]
JMSF032I17Sequence595009428 (2)ref|XP_006354292.1|2e-42PREDICTED: basic salivary proline-rich protein 2-like isoform X1 [Solanum tuber773011267 (2)gb|KDP27856.1|8e-17hypothetical protein JCGZ_18936 [Jatropha curcas]

Alignment

This contig is upended


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rJMSF010O15+           ANNTNCAGTCCAGAGTCAACATCCAGGGTCAGGCNAGANCCGCCTCANCCCCNGNGTAA
                      ____________________________________________________________
consensus              ANNTNCAGTCCAGAGTCAACATCCAGGGTCAGGCNAGANCCGCCTCANCCCCNGNGTAA
 
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rJMSF032I17+          TCAAGATTCAGACAAGAACCACCACCACAACCACCNCCGACCTACAGTCCAGAGTACAAA
rJMSF010O15+          TCAAGANTCAGACAAGAACCACCACCACAACCACCACCGACNTACAGTCCAGAGTACAAA
                      ____________________________________________________________
consensus             TCAAGATTCAGACAAGAACCACCACCACAACCACCACCGACCTACAGTCCAGAGTACAAA
 
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rJMSF032I17+          CATTCAGGATACAGGCAAGAACCACTTCAACGCCCCAGTAGTTCACGGCTCCGACAAGAA
rJMSF010O15+          CATTCAGGATACAGGCAAGAACCACCTCAACGCCCCAGTAGTTCACGGCTCCGACAAGAA
                      ____________________________________________________________
consensus             CATTCAGGATACAGGCAAGAACCACTTCAACGCCCCAGTAGTTCACGGCTCCGACAAGAA
 
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rJMSF032I17+          CCACCACCACCACCGCCACCATCNTACAGTCAAGAACTCAAACACGAGCCTCCTCCATAC
rJMSF010O15+          CCACCACCACCACCGCCACCATCNTACAGTCAAGAACTCAAACACGAGCCTCCTCCATAC
                      ____________________________________________________________
consensus             CCACCACCACCACCGCCACCATCNTACAGTCAAGAACTCAAACACGAGCCTCCTCCATAC
 
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rJMSF032I17+          CAAAACGGTTCAGGATTTAGACAAGAGTTCCCACAACCCATATACGTCTCTCATAGCTAC
rJMSF010O15+          CAAAACGGTTCAGGATTTAGACAAGAGTTCCCACAACCCATATACGTCTCTCATAGCTAC
                      ____________________________________________________________
consensus             CAAAACGGTTCAGGATTTAGACAAGAGTTCCCACAACCCATATACGTCTCTCATAGCTAC
 
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rJMSF032I17+          AACACCTACAAGCCATCGCCTTATGTCACTGGATATGAATATGTCAGGTCACCTCCAAGA
rJMSF010O15+          AACACCTACAAGCCATCGCCTTATGTCACTGGATATGAATATGTCAGGTCACCTCCAAGA
                      ____________________________________________________________
consensus             AACACCTACAAGCCATCGCCTTATGTCACTGGATATGAATATGTCAGGTCACCTCCAAGA
 
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rJMSF032I17+          AACATGAATTACAATAGGCCCGATCCATATCCGGAGGACATGTACCCTAGACCAAGGCGT
rJMSF010O15+          AACATGAATTACAATAGGCCCGATCCATATCCGGAGGACATGTACCCTAGACCAAGGCGT
                      ____________________________________________________________
consensus             AACATGAATTACAATAGGCCCGATCCATATCCGGAGGACATGTACCCTAGACCAAGGCGT
 
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rJMSF032I17+          TACACAGGTTATGATTACGTCCAGTCACAAAACTCGCCTCCAAGATACACACATTATGAT
rJMSF010O15+          TACACAGGTTATGATTACGTCCAGTCACAAAACTCGCCTCCAAGATACACACATTATGAT
                      ____________________________________________________________
consensus             TACACAGGTTATGATTACGTCCAGTCACAAAACTCGCCTCCAAGATACACACATTATGAT
 
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rJMSF032I17+          CATTACACACAGGATTACCGTAGACCCGAGCCTTACTCCGAGGACTACCACAACGGGAAT
rJMSF010O15+          CATTACACACAGGATTACCGTAGACCCGAGCCTTACTCCGAGGACTACCACAACGGGAAT
                      ____________________________________________________________
consensus             CATTACACACAGGATTACCGTAGACCCGAGCCTTACTCCGAGGACTACCACAACGGGAAT
 
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rJMSF032I17+          CTCTCCTCGATGTTCAGTGAAGAAAATCCTAATGCATGCACAATATCATAGGATTGCCAA
rJMSF010O15+          CTCTCCTCGATGTTCAGTGAAGAAAATCCTAATGCATGCACAATATCATAGGATTGCCAA
                      ____________________________________________________________
consensus             CTCTCCTCGATGTTCAGTGAAGAAAATCCTAATGCATGCACAATATCATAGGATTGCCAA
 
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rJMSF032I17+          CAAGGTCTGTATAACTGATTTCGAATAACTTGTTCAAGTGCCAAAACTCATCTTCTCGTT
rJMSF010O15+          CAAGGTCTGTATAACTGATTTCGAATAACTTGTTCAAGTGCCAAAACTCATCTTCTCGTT
                      ____________________________________________________________
consensus             CAAGGTCTGTATAACTGATTTCGAATAACTTGTTCAAGTGCCAAAACTCATCTTCTCGTT
 
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rJMSF032I17+          GACAATTACTGAGTGAATAGTGTGAAATTGTCAAGAGAAGAGATTCTTAGCTTCAAAAGG
rJMSF010O15+          GACAATTACTGAGTGAATAGTGTGAAATTGTCAAGAGAAGAGATTCTTAGCTTCAAAAGG
                      ____________________________________________________________
consensus             GACAATTACTGAGTGAATAGTGTGAAATTGTCAAGAGAAGAGATTCTTAGCTTCAAAAGG
 
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rJMSF032I17+          CAGATGGAATTTATTCTTCAGTCCACTTTGCCTTGGCAATGCATATTGCCTGGCAT    
rJMSF010O15+          CAGATGGAATTTATTCTTCAGTCCACTTTGCCTTGGCAATGCATATTGCCTGGCATTCAT
                      ____________________________________________________________
consensus             CAGATGGAATTTATTCTTCAGTCCACTTTGCCTTGGCAATGCATATTGCCTGGCATTCAT