Contig 011266:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF010K21-                                                                GACCGGC
JMSF012L18-                                                                  CCGGC
                      ____________________________________________________________
consensus                                                                  GACCGGC
 
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JMSF010K21-           TTCCTCCTCTGATCTGCCACTTTCCGATCGATCGGCCGCCCTGTCGGACCCATCTTTAAT
JMSF012L18-           TTCCTCCTCTGATCTGCCACTTTCCGATCGATCGGCCGCCCTGTCGGACCCATCTTTAAT
                      ____________________________________________________________
consensus             TTCCTCCTCTGATCTGCCACTTTCCGATCGATCGGCCGCCCTGTCGGACCCATCTTTAAT
 
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JMSF010K21-           TTATTCTATCCCTTTTCATGTCTTAACTAAAAACACTACATACATATATACCCTTTCTCT
JMSF012L18-           TTATTCTATCCCTTTTCATGTCTTAACTAAAAACACTACATACATATATACCCTTTCTCT
                      ____________________________________________________________
consensus             TTATTCTATCCCTTTTCATGTCTTAACTAAAAACACTACATACATATATACCCTTTCTCT
 
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JMSF010K21-           AACCCCGGCCGGCCGCCCCATTAGCAGAGTTAAACCAATTAATTTAATTAAGCTTCTCGA
JMSF012L18-           AACCCCGGCCGGCCACCCCATTAGCAGAGTTAAACCAATTAATTTAATTAAGCTTCTCGA
                      ____________________________________________________________
consensus             AACCCCGGCCGGCCGCCCCATTAGCAGAGTTAAACCAATTAATTTAATTAAGCTTCTCGA
 
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JMSF010K21-           GCGAGCTCCATTAATGGCGAAAACCTCAAAAAAAGACAGCTCCCGCAGCGGCAGCAACGA
JMSF012L18-           GCGAGCTCCATTAATGGCGAAAACCTCGAAAAAAGACAGCTCCCGCAGCGGCAGCAACGA
                      ____________________________________________________________
consensus             GCGAGCTCCATTAATGGCGAAAACCTCGAAAAAAGACAGCTCCCGCAGCGGCAGCAACGA
 
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JMSF010K21-           CGATNACGTTGTTAAGGTGAAAAGAACTCGTAA                           
JMSF012L18-           CGATTACGTTGTTAAGGTGAAAAGAACTCGTAAAAGCGTGCCCAGAGACTCTCCTCCTCA
                      ____________________________________________________________
consensus             CGATTACGTTGTTAAGGTGAAAAGAACTCGTAAAAGCGTGCCCAGAGACTCTCCTCCTCA
 
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JMSF012L18-           ACGAAGCTCCGTTTTCCGAGGTGTCACCAGGCACCGGTGGACCGGCCGATATGAAGCTCA
                      ____________________________________________________________
consensus             ACGAAGCTCCGTTTTCCGAGGTGTCACCAGGCACCGGTGGACCGGCCGATATGAAGCTCA
 
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JMSF012L18-           TCTATGGGATAAGAACAGCTGGAATGAAGCACAGAGTAAGAAAGGAAGACAAGTATATTT
rJMSF012L18+                                                                    TT
                      ____________________________________________________________
consensus             TCTATGGGATAAGAACAGCTGGAATGAAGCACAGAGTAAGAAAGGAAGACAAGTATATTT
 
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JMSF012L18-           GGGGGCTTATGATGATGAAGAAGCAGCAGCACATGCATATGACTT               
rJMSF012L18+          GGGGGCTTATGATGATGAAGAAGCAGCAGCACATGCATATGACTTGGCAGCATTGAAGTA
rJMSF010K21+                TTATGATGATGNAGAAGCAGCAGCACATGCATATGACTTGGCAGCATTGAAGTA
                      ____________________________________________________________
consensus             GGGGGCTTATGATGATGAAGAAGCAGCAGCACATGCATATGACTTGGCAGCATTGAAGTA
 
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rJMSF012L18+          TTGGGGACAAGAGACAATCCTAAATTTCCCACTTGCTACTTATGAAAAAGAGNTAAAGGA
rJMSF010K21+          TTGGGGACAAGAGACAATCCTAAATTTCCCACTTGCTACTTATGAAAAAGAGCTAAAGGA
                      ____________________________________________________________
consensus             TTGGGGACAAGAGACAATCCTAAATTTCCCACTTGCTACTTATGAAAAAGAGCTAAAGGA
 
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rJMSF012L18+          AATGGAAGGTCAATCAAAAGAAGAGTATATTGGTTCTTTGAGAAGAAAGAGCAGTGGATT
rJMSF010K21+          AATGGAAGGTCAATCAAAAGAAGAGTATATTGGTTCTTTGAGAAGAAAGAGCAGTGGATT
                      ____________________________________________________________
consensus             AATGGAAGGTCAATCAAAAGAAGAGTATATTGGTTCTTTGAGAAGAAAGAGCAGTGGATT
 
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rJMSF012L18+          TTCTAGGGGTGTCTCGAAATACAGAGGAGTAGCAAGACACCATCACAATGGAAGATGGGA
rJMSF010K21+          TTCTAGGGGTGTCTCGAAATACAGAGGAGTAGCAAGACACCATCACAATGGAAGATGGGA
                      ____________________________________________________________
consensus             TTCTAGGGGTGTCTCGAAATACAGAGGAGTAGCAAGACACCATCACAATGGAAGATGGGA
 
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rJMSF012L18+          GGCTCGCATTGGAAGGGTGTTTGGCAACAAATATCTCTACCTTGGAACTTATGCTACTCA
rJMSF010K21+          GGCTCGCATTGGAAGGGTGTTTGGCAACAAATATCTCTACCTTGGGACTTATGCTACTCA
                      ____________________________________________________________
consensus             GGCTCGCATTGGAAGGGTGTTTGGCAACAAATATCTCTACCTTGGGACTTATGCTACTCA
 
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rJMSF012L18+          AGAGGAAGCGGCAACGGCTTATGACATGGCAGCCATAGAGTACCGTGGGCTTAACGCCGT
rJMSF010K21+          AGAGGAAGCGGCAACGGCTTATGACATGGCAGCCATAGAGTACCGTGGGCTTAACGCCGT
                      ____________________________________________________________
consensus             AGAGGAAGCGGCAACGGCTTATGACATGGCAGCCATAGAGTACCGTGGGCTTAACGCCGT
 
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rJMSF012L18+          CACCAATTTTGACCTCAGCCGTTACGTCAAGTGGCTACGCCCTGATGATCAAAACCCTAA
rJMSF010K21+          CACCAATTTTGACCTCAGCCGTTACGTCAAGTGGCTACGCCCTGATGATCAAAACCCTAA
                      ____________________________________________________________
consensus             CACCAATTTTGACCTCAGCCGTTACGTCAAGTGGCTACGCCCTGATGATCAAAACCCTAA
 
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rJMSF012L18+          CAACCTTCAGCCAAACCCTAACCCTAGTAATGACGCCGTTAGTCATCATCATGATGAACT
rJMSF010K21+          CAACCTTCAGCCAAACCCTAACCCTAGTAATGACGCCGTTAGTCATCATCATGATGAACT
                      ____________________________________________________________
consensus             CAACCTTCAGCCAAACCCTAACCCTAGTAATGACGCCGTTAGTCATCATCATGATGAACT
 
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rJMSF012L18+          CATCATCACCACCCAGCAACAGCAGCAGCCGCAACAAAGCTCCGGCGGTTCATCGGAAAC
rJMSF010K21+          CATCATCACCACCCAGCAACAGCAGCAGCCGCAACAAAGCTCCGGCGGTTCATCGGAAAC
                      ____________________________________________________________
consensus             CATCATCACCACCCAGCAACAGCAGCAGCCGCAACAAAGCTCCGGCGGTTCATCGGAAAC
 
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rJMSF012L18+          GGCCTCTCCTCCGCCGCATGACCCCTCCGCCGCCTCCGCCACTTCGTCGGCATCTACCAA
rJMSF010K21+          GGCCTCTCCTCCGCCGCATGACCCCTCCGCCGCCTCCGCCACTTCGTCGGCATCTACCAA
                      ____________________________________________________________
consensus             GGCCTCTCCTCCGCCGCATGACCCCTCCGCCGCCTCCGCCACTTCGTCGGCATCTACCAA
 
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rJMSF012L18+          CTTTCCAACCACCCCGCCGGAGCCGGAGCTGGAGCCGGACCGACCGAGAAGANGTTTNCC
rJMSF010K21+          CTTTCCAACCACCCCGCCGGAGCCGGAGCTGGAGCCGGACCGACCGAGAAGAAGTTTCCC
                      ____________________________________________________________
consensus             CTTTCCAACCACCCCGCCGGAGCCGGAGCTGGAGCCGGACCGACCGAGAAGAAGTTTCCC
 
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rJMSF012L18+          GGACGACNTACAAACGTACT                                        
rJMSF010K21+          GGACGACATACAAACGTACTTTGACTGCGACGACTCGAGTAGCTTTGTGGAGGAGCATGA
                      ____________________________________________________________
consensus             GGACGACATACAAACGTACTTTGACTGCGACGACTCGAGTAGCTTTGTGGAGGAGCATGA
 
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rJMSF010K21+          CATCATCTTTGGTGACCTAAGCTCATTTGATTCATCCATGTTTCATTGTGAGCTTGATGC
                      ____________________________________________________________
consensus             CATCATCTTTGGTGACCTAAGCTCATTTGATTCATCCATGTTTCATTGTGAGCTTGATGC