Contig 011266:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010K21Sequence280011266 (4)774011266 (4)ref|XP_002512756.1|3e-80conserved hypothetical protein [Ricinus communis] gb|EEF49259.1| conserved hypot
JMSF012L18Sequence472011266 (4)emb|CBI25261.3|2e-33unnamed protein product [Vitis vinifera]682011266 (4)ref|XP_002512756.1|7e-63conserved hypothetical protein [Ricinus communis] gb|EEF49259.1| conserved hypot

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF010K21- GACCGGC
JMSF012L18- CCGGC
                      ____________________________________________________________
consensus GACCGGC
 
. : . : . : . : . : . :
JMSF010K21- TTCCTCCTCTGATCTGCCACTTTCCGATCGATCGGCCGCCCTGTCGGACCCATCTTTAAT
JMSF012L18- TTCCTCCTCTGATCTGCCACTTTCCGATCGATCGGCCGCCCTGTCGGACCCATCTTTAAT
                      ____________________________________________________________
consensus TTCCTCCTCTGATCTGCCACTTTCCGATCGATCGGCCGCCCTGTCGGACCCATCTTTAAT
 
. : . : . : . : . : . :
JMSF010K21- TTATTCTATCCCTTTTCATGTCTTAACTAAAAACACTACATACATATATACCCTTTCTCT
JMSF012L18- TTATTCTATCCCTTTTCATGTCTTAACTAAAAACACTACATACATATATACCCTTTCTCT
                      ____________________________________________________________
consensus TTATTCTATCCCTTTTCATGTCTTAACTAAAAACACTACATACATATATACCCTTTCTCT
 
. : . : . : . : . : . :
JMSF010K21- AACCCCGGCCGGCCGCCCCATTAGCAGAGTTAAACCAATTAATTTAATTAAGCTTCTCGA
JMSF012L18- AACCCCGGCCGGCCACCCCATTAGCAGAGTTAAACCAATTAATTTAATTAAGCTTCTCGA
                      ____________________________________________________________
consensus AACCCCGGCCGGCCGCCCCATTAGCAGAGTTAAACCAATTAATTTAATTAAGCTTCTCGA
 
. : . : . : . : . : . :
JMSF010K21- GCGAGCTCCATTAATGGCGAAAACCTCAAAAAAAGACAGCTCCCGCAGCGGCAGCAACGA
JMSF012L18- GCGAGCTCCATTAATGGCGAAAACCTCGAAAAAAGACAGCTCCCGCAGCGGCAGCAACGA
                      ____________________________________________________________
consensus GCGAGCTCCATTAATGGCGAAAACCTCGAAAAAAGACAGCTCCCGCAGCGGCAGCAACGA
 
. : . : . : . : . : . :
JMSF010K21- CGATNACGTTGTTAAGGTGAAAAGAACTCGTAA
JMSF012L18- CGATTACGTTGTTAAGGTGAAAAGAACTCGTAAAAGCGTGCCCAGAGACTCTCCTCCTCA
                      ____________________________________________________________
consensus CGATTACGTTGTTAAGGTGAAAAGAACTCGTAAAAGCGTGCCCAGAGACTCTCCTCCTCA
 
. : . : . : . : . : . :
JMSF012L18- ACGAAGCTCCGTTTTCCGAGGTGTCACCAGGCACCGGTGGACCGGCCGATATGAAGCTCA
                      ____________________________________________________________
consensus ACGAAGCTCCGTTTTCCGAGGTGTCACCAGGCACCGGTGGACCGGCCGATATGAAGCTCA
 
. : . : . : . : . : . :
JMSF012L18- TCTATGGGATAAGAACAGCTGGAATGAAGCACAGAGTAAGAAAGGAAGACAAGTATATTT
rJMSF012L18+ TT
                      ____________________________________________________________
consensus TCTATGGGATAAGAACAGCTGGAATGAAGCACAGAGTAAGAAAGGAAGACAAGTATATTT
 
. : . : . : . : . : . :
JMSF012L18- GGGGGCTTATGATGATGAAGAAGCAGCAGCACATGCATATGACTT
rJMSF012L18+ GGGGGCTTATGATGATGAAGAAGCAGCAGCACATGCATATGACTTGGCAGCATTGAAGTA
rJMSF010K21+ TTATGATGATGNAGAAGCAGCAGCACATGCATATGACTTGGCAGCATTGAAGTA
                      ____________________________________________________________
consensus GGGGGCTTATGATGATGAAGAAGCAGCAGCACATGCATATGACTTGGCAGCATTGAAGTA
 
. : . : . : . : . : . :
rJMSF012L18+ TTGGGGACAAGAGACAATCCTAAATTTCCCACTTGCTACTTATGAAAAAGAGNTAAAGGA
rJMSF010K21+ TTGGGGACAAGAGACAATCCTAAATTTCCCACTTGCTACTTATGAAAAAGAGCTAAAGGA
                      ____________________________________________________________
consensus TTGGGGACAAGAGACAATCCTAAATTTCCCACTTGCTACTTATGAAAAAGAGCTAAAGGA
 
. : . : . : . : . : . :
rJMSF012L18+ AATGGAAGGTCAATCAAAAGAAGAGTATATTGGTTCTTTGAGAAGAAAGAGCAGTGGATT
rJMSF010K21+ AATGGAAGGTCAATCAAAAGAAGAGTATATTGGTTCTTTGAGAAGAAAGAGCAGTGGATT
                      ____________________________________________________________
consensus AATGGAAGGTCAATCAAAAGAAGAGTATATTGGTTCTTTGAGAAGAAAGAGCAGTGGATT
 
. : . : . : . : . : . :
rJMSF012L18+ TTCTAGGGGTGTCTCGAAATACAGAGGAGTAGCAAGACACCATCACAATGGAAGATGGGA
rJMSF010K21+ TTCTAGGGGTGTCTCGAAATACAGAGGAGTAGCAAGACACCATCACAATGGAAGATGGGA
                      ____________________________________________________________
consensus TTCTAGGGGTGTCTCGAAATACAGAGGAGTAGCAAGACACCATCACAATGGAAGATGGGA
 
. : . : . : . : . : . :
rJMSF012L18+ GGCTCGCATTGGAAGGGTGTTTGGCAACAAATATCTCTACCTTGGAACTTATGCTACTCA
rJMSF010K21+ GGCTCGCATTGGAAGGGTGTTTGGCAACAAATATCTCTACCTTGGGACTTATGCTACTCA
                      ____________________________________________________________
consensus GGCTCGCATTGGAAGGGTGTTTGGCAACAAATATCTCTACCTTGGGACTTATGCTACTCA
 
. : . : . : . : . : . :
rJMSF012L18+ AGAGGAAGCGGCAACGGCTTATGACATGGCAGCCATAGAGTACCGTGGGCTTAACGCCGT
rJMSF010K21+ AGAGGAAGCGGCAACGGCTTATGACATGGCAGCCATAGAGTACCGTGGGCTTAACGCCGT
                      ____________________________________________________________
consensus AGAGGAAGCGGCAACGGCTTATGACATGGCAGCCATAGAGTACCGTGGGCTTAACGCCGT
 
. : . : . : . : . : . :
rJMSF012L18+ CACCAATTTTGACCTCAGCCGTTACGTCAAGTGGCTACGCCCTGATGATCAAAACCCTAA
rJMSF010K21+ CACCAATTTTGACCTCAGCCGTTACGTCAAGTGGCTACGCCCTGATGATCAAAACCCTAA
                      ____________________________________________________________
consensus CACCAATTTTGACCTCAGCCGTTACGTCAAGTGGCTACGCCCTGATGATCAAAACCCTAA
 
. : . : . : . : . : . :
rJMSF012L18+ CAACCTTCAGCCAAACCCTAACCCTAGTAATGACGCCGTTAGTCATCATCATGATGAACT
rJMSF010K21+ CAACCTTCAGCCAAACCCTAACCCTAGTAATGACGCCGTTAGTCATCATCATGATGAACT
                      ____________________________________________________________
consensus CAACCTTCAGCCAAACCCTAACCCTAGTAATGACGCCGTTAGTCATCATCATGATGAACT
 
. : . : . : . : . : . :
rJMSF012L18+ CATCATCACCACCCAGCAACAGCAGCAGCCGCAACAAAGCTCCGGCGGTTCATCGGAAAC
rJMSF010K21+ CATCATCACCACCCAGCAACAGCAGCAGCCGCAACAAAGCTCCGGCGGTTCATCGGAAAC
                      ____________________________________________________________
consensus CATCATCACCACCCAGCAACAGCAGCAGCCGCAACAAAGCTCCGGCGGTTCATCGGAAAC
 
. : . : . : . : . : . :
rJMSF012L18+ GGCCTCTCCTCCGCCGCATGACCCCTCCGCCGCCTCCGCCACTTCGTCGGCATCTACCAA
rJMSF010K21+ GGCCTCTCCTCCGCCGCATGACCCCTCCGCCGCCTCCGCCACTTCGTCGGCATCTACCAA
                      ____________________________________________________________
consensus GGCCTCTCCTCCGCCGCATGACCCCTCCGCCGCCTCCGCCACTTCGTCGGCATCTACCAA
 
. : . : . : . : . : . :
rJMSF012L18+ CTTTCCAACCACCCCGCCGGAGCCGGAGCTGGAGCCGGACCGACCGAGAAGANGTTTNCC
rJMSF010K21+ CTTTCCAACCACCCCGCCGGAGCCGGAGCTGGAGCCGGACCGACCGAGAAGAAGTTTCCC
                      ____________________________________________________________
consensus CTTTCCAACCACCCCGCCGGAGCCGGAGCTGGAGCCGGACCGACCGAGAAGAAGTTTCCC
 
. : . : . : . : . : . :
rJMSF012L18+ GGACGACNTACAAACGTACT
rJMSF010K21+ GGACGACATACAAACGTACTTTGACTGCGACGACTCGAGTAGCTTTGTGGAGGAGCATGA
                      ____________________________________________________________
consensus GGACGACATACAAACGTACTTTGACTGCGACGACTCGAGTAGCTTTGTGGAGGAGCATGA
 
. : . : . : . : . : . :
rJMSF010K21+ CATCATCTTTGGTGACCTAAGCTCATTTGATTCATCCATGTTTCATTGTGAGCTTGATGC
                      ____________________________________________________________
consensus CATCATCTTTGGTGACCTAAGCTCATTTGATTCATCCATGTTTCATTGTGAGCTTGATGC