| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003K17 | Sequence | 529 | 003057 (5) | ref|XP_011078468.1| | 8e-30 | PREDICTED: uncharacterized protein LOC105162195 isoform X1 [Sesamum indicum] | 729 | 011261 (9) | ref|XP_009615900.1| | 8e-95 | PREDICTED: caltractin-like isoform X2 [Nicotiana tomentosiformis] gb|AAF07221.1| |
| JMFN010M03 | Sequence | 624 | 011261 (9) | ref|XP_009615900.1| | 2e-95 | PREDICTED: caltractin-like isoform X2 [Nicotiana tomentosiformis] gb|AAF07221.1| | |||||
| JMFN035A16 | Sequence | 624 | 011261 (9) | ref|XP_009615900.1| | 2e-95 | PREDICTED: caltractin-like isoform X2 [Nicotiana tomentosiformis] gb|AAF07221.1| | |||||
| JMSF009L20 | Sequence | 723 | 011261 (9) | ref|XP_009615900.1| | 8e-96 | PREDICTED: caltractin-like isoform X2 [Nicotiana tomentosiformis] gb|AAF07221.1| | |||||
| JMSF009M20 | Sequence | 337 | 011261 (9) | ref|XP_009788351.1| | 3e-46 | PREDICTED: probable calcium-binding protein CML20 isoform X2 [Nicotiana sylvest | 714 | 011261 (9) | ref|XP_009615900.1| | 1e-95 | PREDICTED: caltractin-like isoform X2 [Nicotiana tomentosiformis] gb|AAF07221.1| |
| JMSF028B10 | Sequence | 666 | 011261 (9) | ref|XP_009615900.1| | 4e-95 | PREDICTED: caltractin-like isoform X2 [Nicotiana tomentosiformis] gb|AAF07221.1| | 688 | 011261 (9) | ref|XP_009615900.1| | 5e-95 | PREDICTED: caltractin-like isoform X2 [Nicotiana tomentosiformis] gb|AAF07221.1| |
| JMSF028E15 | Sequence | 538 | 010611 (6) | emb|CDP14041.1| | 2e-10 | unnamed protein product [Coffea canephora] | 666 | 011261 (9) | ref|XP_009615900.1| | 3e-94 | PREDICTED: caltractin-like isoform X2 [Nicotiana tomentosiformis] gb|AAF07221.1| |
This contig is upended
. : . : . : . : . : . :
rJMFF003K17+ CTGCTAGGTTTGAC
____________________________________________________________
consensus CTGCTAGGTTTGAC
. : . : . : . : . : . :
rJMSF028E15+ TTTCCGCATCCCTCCTCCTCTCG
JMSF028B10- AAAATCAAGCATTTTCCGCATCCCTCCTCCTCTCG
rJMSF028B10+ AAAATCAAGCATTTTCCGCATCCCTCCTCCTCTCG
rJMSF009M20+ AAACCTCCCAAAATCAAGCATTTTCCGCATCCCTCCTCCTCTCG
JMFN010M03- AAACCTCCCAAAATCAAGCATTTTCCGCATCCCTCCTCCTCTCG
JMSF009M20- AAACCTCCCAAAATCAAGCATTTTCCGCATCCCTCCTCCTCTCG
rJMFF003K17+ ACAAAGACAATTGTCAAAACNTCCCAAAATCAAGCATTTTCCGCATCCCTCCTCCCCTCG
rJMSF009L20+ AAACCTCCCAAAATCAAGCATTTTCCGCATCCCTCCTCCTCTCG
____________________________________________________________
consensus ACAAAGACAATTGTCAAAACCTCCCAAAATCAAGCATTTTCCGCATCCCTCCTCCTCTCG
. : . : . : . : . : . :
rJMSF028E15+ CTTAGATCGCCATGACTTTTCTGGAAGAACGAACGACGACAAGCCATTCTAGGAGAGAGA
JMSF028B10- CTTAGATCGCCATGACTTTTCTGGAAGAACGAACGACGACCAGCCATTCTAGGAGAGAGA
JMFN035A16- TTAGATCGCCATGACTTTTCTGGAAGAACGAACGACGACAAGCCATTCTAGGAGAGAGA
rJMSF028B10+ CTTAGATCGCCATGACTTTTCTGGAAGAACGAACGACGACAAGCCATTCTAGGAGAGAGA
rJMSF009M20+ CTTAGATCGCCATGACTTTTCTGGAAGAACGAACGACGACAAGCCATTCTAGGAGAGAGA
JMFN010M03- CTTAGATCGCCATGACTTTTCTGGAAGAACGAACGACGACAAGCCATTCTAGGAGAGAGA
JMSF009M20- CTTAGATCGCCATGACTTTTCTGGAAGAACGAACGACGACNAGCCATTCTAGGAGAGAGA
rJMFF003K17+ CTTAGATCGCCATGACTTTTCTGGAAGAACGAACGACGACAAGCCATTCTAGGAGAGAGA
rJMSF009L20+ CTTAGATCGCCATGACTTTTCTGGAAGAACGAACGACGACAAGCCATTCTAGGAGAGAGA
____________________________________________________________
consensus CTTAGATCGCCATGACTTTTCTGGAAGAACGAACGACGACAAGCCATTCTAGGAGAGAGA
. : . : . : . : . : . :
rJMSF028E15+ AGCCCAGAGGACGCCACCATGGTCTAACACAACAAAAAAGGCAAGAGATAAGGGAATGCT
JMSF028B10- AGCCCAGAGGACGCCACCATGGTCTAACACAACAAAAAAGGCAAGAGATAAGGGAATGCT
JMFN035A16- AGCCCAGAGGACGCCACCATGGTCTAACACAACAAAAAAGGCAAGAGATAAGGGAATGCT
rJMSF028B10+ AGCCCAGAGGACGCCACCATGGTCTAACACAACAAAAAAGGCAAGAGATAAGGGAATGCT
rJMSF009M20+ AGCCCAGAGGACGCCACCATGGTCTAACACAACAAAAAAGGCAAGAGATAAGGGAATGCT
JMFN010M03- AGCCCAGAGGACGCCACCATGGTCTAACACAACAAAAAAGGCAAGAGATAAGGGAATGCT
JMSF009M20- AGCCCAGAGGACGCCACCATGGTCTAACACAACAAAAAAGGCAAGAGATAAGGGAATGCT
rJMFF003K17+ AGCCCAGAGGACGCCACCATGGTCTAACACAACAAAAAAGGCAAGAGATAAGGGAATGCT
rJMSF009L20+ AGCCCAGAGGACGCCACCATGGTCTAACACAACAAAAAAGGCAAGAGATAAGGGAATGCT
____________________________________________________________
consensus AGCCCAGAGGACGCCACCATGGTCTAACACAACAAAAAAGGCAAGAGATAAGGGAATGCT
. : . : . : . : . : . :
rJMSF028E15+ TTGAGCTCTTTGATACTGACAACTCTGGCACCATAGATGCCAAAGAGTTGAATGTTGCCA
JMSF028B10- TTGAGCTCTTTGATACTGACAACTCTGGCACCATAGATGCCAAAGAGTTGAATGTTGCCA
JMFN035A16- TTGAGCTCTTTGATACTGACAACTCTGGCACCATAGATGCCAAAGAGTTGAATGTTGCCA
rJMSF028B10+ TTGAGCTCTTTGATACTGACAACTCTGGCACCATAGATGCCAAAGAGTTGAATGTTGCCA
rJMSF009M20+ TTGAGCTCTTTGATACTGACAACTCTGGCACCATAGATGCCAAAGAGTTGAATGTTGCCA
JMFN010M03- TTGAGCTCTTTGATACTGACAACTCTGGCACCATAGATGCCAAAGAGTTGAATGTTGCCA
JMSF009M20- TTGAGCTCTTTGATACTGACAACTCTGGCACCATAGATGCCAAAGAGTTGAATGTTGCCA
rJMFF003K17+ TTGAGCTCTTTGATACTGACAACTCTGGCACCATAGATGCCAAAGAGTTGAATGTTGCCA
rJMSF009L20+ TTGAGCTCTTTGATACTGACAACTCTGGCACCATAGATGCCAAAGAGTTGAATGTTGCCA
____________________________________________________________
consensus TTGAGCTCTTTGATACTGACAACTCTGGCACCATAGATGCCAAAGAGTTGAATGTTGCCA
. : . : . : . : . : . :
rJMSF028E15+ TGAGGGCTCTGGGTTTTGAAGCAACTGAAGAGGAAATCAACCGAATGATTGCGGAAGTTG
JMSF028B10- TGAGGGCTCTGGGTTTTGAAGCAACTGAAGAGGAAATCAACCGAATGATTGCGGAAGTTG
JMFN035A16- TGAGGGCTCTGGGTTTTGAAGCAACTGAAGAGGAAATCAACCGAATGATTGCGGAAGTTG
rJMSF028B10+ TGAGGGCTCTGGGTTTTGAAGCAACTGAAGAGGAAATCAACCGAATGATTGCGGAAGTTG
rJMSF009M20+ TGAGGGCTCTGGGTTTTGAAGCAACTGAAGAGGAAATCAACCGAATGATTGCGGAAGTTG
JMFN010M03- TGAGGGCTCTGGGTTTTGAAGCAACTGAAGAGGAAATCAACCGAATGATTGCGGAAGTTG
JMSF009M20- TGAGGGCTCTGGGTTTTGAAGCAACTGAAGAGGAAATCAACCGAATGATTGCGGAAGTTG
rJMFF003K17+ TGAGGGCTCTGGGTTTTGAAGCAACTGAAGAGGAAATCAACCGAATGATTGCGGAAGTTG
rJMSF009L20+ TGAGGGCTCTGGGTTTTGAAGCAACTGAAGAGGAAATCAACCGAATGATTGCGGAAGTTG
____________________________________________________________
consensus TGAGGGCTCTGGGTTTTGAAGCAACTGAAGAGGAAATCAACCGAATGATTGCGGAAGTTG
. : . : . : . : . : . :
rJMSF028E15+ ACAAGGATGGCAGTGGAGCAATTGATTTCGATGAGTTTGTGCATATGATGACTAATAAAT
JMSF028B10- ACAAGGATGGCAGTGGAGCAATTGATTTCGATGAGTTTGTGCATATGATGACTAATAAAT
JMFN035A16- ACAAGGATGGCAGTGGAGCAATTGATTTCGATGAGTTTGTGCATATGATGACTAATAAAT
rJMSF028B10+ ACAAGGATGGCAGTGGAGCAATTGATTTCGATGAGTTTGTGCATATGATGACTAATAAAT
rJMSF009M20+ ACAAGGATGGCAGTGGAGCAATTGATTTCGATGAGTTTGTGCATATGATGACTAATAAAT
JMFN010M03- ACAAGGATGGCAGTGGAGCAATTGATTTCGATGAGTTTGTGCATATGATGACTAATAAAT
JMSF009M20- ACAAGGATGGCAGTGGAGCAATTGATTTCGATG
rJMFF003K17+ ACAAGGATGGCAGTGGAGCAATTGATTTCGATGAGTTTGTGCATATGATGACTAATAAAT
rJMSF009L20+ ACAAGGATGGCAGTGGAGCAATTGATTTCGATGAGTTTGTGCATATGATGACTAATAAAT
____________________________________________________________
consensus ACAAGGATGGCAGTGGAGCAATTGATTTCGATGAGTTTGTGCATATGATGACTAATAAAT
. : . : . : . : . : . :
rJMSF028E15+ TTGGGGAGAGGAGCACTAAAGAAGAACTCACAAAAGCATTCCAGATCATTGATCAAGATA
JMSF028B10- TTGGGGAGAGGAGCACTAAAGAAGAACTCACAAAAGCATTCCAGATCATTGATCAAGATA
JMFN035A16- TTGGGGAGAGGAGCACTAAAGAAGAACTCACAAAAGCATTCCAGATCATTGATCAAGATA
rJMSF028B10+ TTGGGGAGAGGAGCACTAAAGAAGAACTCACAAAAGCATTCCAGATCATTGATCAAGATA
rJMSF009M20+ TTGGGGAGAGGAGCACTAAAGAAGAACTCACAAAAGCATTCCAGATCATTGATCAAGATA
JMFN010M03- TTGGGGAGAGGAGCACTAAAGAAGAACTCACAAAAGCATTCCAGATCATTGATCAAGATA
rJMFF003K17+ TTGGGGAGAGGAGCACTAAAGAAGAACTCACAAAAGCATTCCAGATCATTGATCAAGATA
rJMSF009L20+ TTGGGGAGAGGAGCACTAAAGAAGAACTCACAAAAGCATTCCAGATCATTGATCAAGATA
____________________________________________________________
consensus TTGGGGAGAGGAGCACTAAAGAAGAACTCACAAAAGCATTCCAGATCATTGATCAAGATA
. : . : . : . : . : . :
rJMSF028E15+ AAAATGGGAAAATCTCCGCTGGAGACATTAAGCGTATTTCCAAGGAATTGGGCGAGCATT
JMSF028B10- AAAATGGGAAAATCTCCGCTGGAGACATTAAGCGTATTTCCAAGGAATTGGGCGAGCATT
JMFN035A16- AAAATGGGAAAATCTCCGCTGGAGACATTAAGCGTATTTCCAAGGAATTGGGCGAGCATT
rJMSF028B10+ AAAATGGGAAAATCTCCGCTGGAGACATTAAGCGTATTTCCAAGGAATTGGGCGAGCATT
rJMSF009M20+ AAAATGGGAAAATCTCCGCTGGAGACATTAAGCGTATTTCCAAGGAATTGGGCGAGCATT
JMFN010M03- AAAATGGGAAAATCTCCGCTGGAGACATTAAGCGTATTTCCAAGGAATTGGGCGAGCATT
rJMFF003K17+ AAAATGGGAAAATCTCCGCTGGAGACATTAAGCGTATTTCCAAGGAATTGGGCGAGCATT
rJMSF009L20+ AAAATGGGAAAATCTCCGCTGGAGACATTAAGCGTATTTCCAAGGAATTGGGCGAGCATT
____________________________________________________________
consensus AAAATGGGAAAATCTCCGCTGGAGACATTAAGCGTATTTCCAAGGAATTGGGCGAGCATT
. : . : . : . : . : . :
rJMSF028E15+ TTACTGATGAAGAGATTCAACTGATGATTGAGGGAGCTGATCAAGATCGTGATGGAGAAG
JMSF028B10- TTACTGATGAAGAGATTCAACTGATGATTGAGGGAGCTGATCAAGATCGTGATGGAGAAG
JMFN035A16- TTACTGATGAAGAGATTCAACTGATGATTGAGGGAGCTGATCAAGATCGTGATGGAGAAG
rJMSF028B10+ TTACTGATGAAGAGATTCAACTGATGATTGAGGGAGCTGATCAAGATCGTGATGGAGAAG
rJMSF009M20+ TTACTGATGAAGAGATTCAACTGATGATTGAGGGAGCTGATCAAGATCGTGATGGAGAAG
JMFN010M03- TTACTGATGAAGAGATTCAACTGATGATTGAGGGAGCTGATCAAGATCGTGATGGAGAAG
rJMFF003K17+ TTACTGATGAAGAGATTCAACTGATGATTGAGGGAGCTGATCAAGATCGTGATGGAGAAG
rJMSF009L20+ TTACTGATGAAGAGATTCAACTGATGATTGAGGGAGCTGATCAAGATCGTGATGGAGAAG
____________________________________________________________
consensus TTACTGATGAAGAGATTCAACTGATGATTGAGGGAGCTGATCAAGATCGTGATGGAGAAG
. : . : . : . : . : . :
rJMSF028E15+ TTAGCTCAGAGGAATTCATGACAATGATGAGGAGGACTGCCTTTGGGCGTTAGAGCTTGT
JMSF028B10- TTAGCTCAGAGGAATTCATGAGAATGATGAGGAGGACTGCCTTTGGGCGTTAGAGCTTGT
JMFN035A16- TTAGCTCAGAGGAATTCATGAGAATGATGAGGAGGACTGCCTTTGGGCGTTAGAGCTTGT
rJMSF028B10+ TTAGCTCAGAGGAATTCATGAGAATGATGAGGAGGACTGCCTTTGGGCGTTAGAGCTTGT
rJMSF009M20+ TTAGCTCAGAGGAATTCATGAGAATGATGAGGAGGACTGCCTTTGGGCGTTAGAGCTTGT
JMFN010M03- TTAGCTCAGAGGAATTCATGAGAATGATGAGGAGGACTGCCTTTGGGCGTTAGAGCTTGT
rJMFF003K17+ TTAGCTCAGAGGAATTCATGAGAATGATGAGGAGGACTGCCTTTGGGCGTTAGAGCTTGT
rJMSF009L20+ TTAGCTCAGAGGAATTCATGAGAATGATGAGGAGGACTGCCTTTGGGCGTTAGAGCTTGT
____________________________________________________________
consensus TTAGCTCAGAGGAATTCATGAGAATGATGAGGAGGACTGCCTTTGGGCGTTAGAGCTTGT
. : . : . : . : . : . :
rJMSF028E15+ AGTTTTTGTTCCTAAGCCC-AAAAATGTAATTTCGTTCTTAGATCTATGTAAACTAGTTC
JMSF028B10- AGTTTTTGTTCCTAAGCCC-AAAAATGTAATTTCGTTCTTAGATCTATGTAAACTAGTTC
JMFN035A16- AGTTTTTGTTCCTAAGCCC-ANAAATGTAATTTCGTTCTTAGATCTATGTAAACTAGTTC
rJMSF028B10+ AGTTTTTGTTCCTAAGCCC-AAAAATGTAATTTCGTTCTTAGATCTATGTAAACTAGTTC
rJMSF009M20+ AGTTTTTGTTCCTAAGCCCAAAAAATGTAATTTCGTTCTTAGATCTATGTAAACTAGTTC
JMFN010M03- AGTTNTTGTTCCTAAGCCC-AAAAATGTAATTTCGTTC
rJMFF003K17+ AGTTTTTGTTCCTAAGCCC-AAAAATGTAATTTCGTTCTTAGATCTATGTAAACTAGTTC
rJMSF009L20+ AGTTTTTGTTCCTAAGCCCAAAAAATGTAATTTCGTTCTTAGATCTATGTAAACTAGTTC
____________________________________________________________
consensus AGTTTTTGTTCCTAAGCCC-AAAAATGTAATTTCGTTCTTAGATCTATGTAAACTAGTTC
. : . : . : . : . : . :
rJMSF028E15+ TGAAAACTGGTTGTGAAGTCTGTGTGTGCAAAACTGCAAATAC
JMSF028B10- TGAAAACTGGTTGTGAAGTCTGTGTGTGCA
JMFN035A16- TGAAAACTGGTTGTGAAGTCTGTGTG
rJMSF028B10+ TGAAAACTGGTTGTGAAGTCTGTGTGTGCAAAACTGCAAATAC
rJMSF009M20+ TGAAAACTGGTTGTGAAGTCTGTGTGTGCAAAACTGCAAATAC
rJMFF003K17+ TGAAAACTGGTTGTGAAGTCTGTGTGTGCAAAACTGCAAATAC
rJMSF009L20+ TGAAAACTGGTTGTGAAGTCTGTGTGTGCAAAACTGCAAATACCTGGTTTTGTAATATAC
____________________________________________________________
consensus TGAAAACTGGTTGTGAAGTCTGTGTGTGCAAAACTGCAAATACCTGGTTTTGTAATATAC