Contig 011259:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF009H24+                                                             TNATCAGCA
                      ____________________________________________________________
consensus                                                                TNATCAGCA
 
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rJMSF028H02+                                                               GGCCCAA
rJMSF009H24+          GCGNCAAACATCATTTNGGCTCTNTACCTGATGCTTGTGATCGTTATCAACATGGCCCAA
                      ____________________________________________________________
consensus             GCGNCAAACATCATTTNGGCTCTNTACCTGATGCTTGTGATCGTTATCAACATGGCCCAA
 
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rJMSF028H02+          ACAATAATCCTCAACTGAAATATTTTCAGCAAGATTTTGACACAACCCTCGCTTTCTGTA
rJMSF009H24+          ACAATAATCCTCAACTGAAATATTTTCAGCAAGATTTTGACACAACCCTCGCTTTCTGTA
                      ____________________________________________________________
consensus             ACAATAATCCTCAACTGAAATATTTTCAGCAAGATTTTGACACAACCCTCGCTTTCTGTA
 
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rJMSF028H02+          ATCATGAAAGGAAACAGAGAACAGAGGAAGTCTTTGGTTCTGAGCTGAGGAACATTAAGG
rJMSF009H24+          ATCATGAAAGGAAACAGAGAACAGAGGAAGTCTTTGGTTCTGAGCTGAGGAACATTAAGG
                      ____________________________________________________________
consensus             ATCATGAAAGGAAACAGAGAACAGAGGAAGTCTTTGGTTCTGAGCTGAGGAACATTAAGG
 
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rJMSF028H02+          GACAAGTTCTGACATCTGGCAGCACTAGCAGGCAGCCTGGTCGGAAACATTCTTTGGAGA
rJMSF009H24+          GACAAGTTCTGACATCTGGCAGCACTAGCAGGCAGCCTGGTCGGAAACATTCTTTGGAGA
                      ____________________________________________________________
consensus             GACAAGTTCTGACATCTGGCAGCACTAGCAGGCAGCCTGGTCGGAAACATTCTTTGGAGA
 
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rJMSF028H02+          CAACAACCTTGAGTGATTCTAAGAGTACTGAGGCATCTGCTGGTTTATCCATGGATGAGG
rJMSF009H24+          CAACAACCTTGAGTGATTCTAAGAGTACTGAGGCATCTGCTGGTTTATCCATGGATGAGG
                      ____________________________________________________________
consensus             CAACAACCTTGAGTGATTCTAAGAGTACTGAGGCATCTGCTGGTTTATCCATGGATGAGG
 
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rJMSF028H02+          TTGGTGGTGTTGATTCTGTGTCTGTGCCTTCTACATCAAGGGTTACAG---AGGGTTTGG
rJMSF009H24+          TTGGTGGTGTTGATTCTGTGTCTGTGCCTTCTACATCAAGGGTTACAGAGCAGGGTTTGG
                      ____________________________________________________________
consensus             TTGGTGGTGTTGATTCTGTGTCTGTGCCTTCTACATCAAGGGTTACAGAGCAGGGTTTGG
 
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rJMSF028H02+          ATTATCCCCGACATCCTTCTGTTGCATCTTCCACCTTGGTGGAACTGACTACACGCTTGG
rJMSF009H24+          ATTATCCCCGACATCCTTCTGTTGCATCTTCCACCTTGGTGGAACTGACTACACGCTTGG
                      ____________________________________________________________
consensus             ATTATCCCCGACATCCTTCTGTTGCATCTTCCACCTTGGTGGAACTGACTACACGCTTGG
 
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rJMSF028H02+          ACTTCTTCAAAGAACGACGTTCTCAGCTGATGGAGCAGTTACACAGCCTCGACCTAAACT
rJMSF009H24+          ACTTCTTCAAAGAACGACGTTCTCAGCTGATGGAGCAGTTACACAGCCTCGACCTAAACT
                      ____________________________________________________________
consensus             ACTTCTTCAAAGAACGACGTTCTCAGCTGATGGAGCAGTTACACAGCCTCGACCTAAACT
 
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rJMSF028H02+          ATGGGTCAGCATCTCATGATTTCATGTACAAACCGTCATCTCCTCCTTGGAACTGAGCAG
rJMSF009H24+          ATGGGTCAGCATCTCATGATTTCATGTACAAACCGTCATCTCCTCCTTGGAACTGAGCAG
                      ____________________________________________________________
consensus             ATGGGTCAGCATCTCATGATTTCATGTACAAACCGTCATCTCCTCCTTGGAACTGAGCAG
 
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rJMSF028H02+          TGACTAAACATGGAGTTTCATCATCCCATGTGAAGGATTTGCGTCTTACCATTTGTATAT
rJMSF009H24+          TGACTAAACATGGAGTTTCATCATCCCATGTGAAGGATTTGCGTCTTACCATTTGTATAT
                      ____________________________________________________________
consensus             TGACTAAACATGGAGTTTCATCATCCCATGTGAAGGATTTGCGTCTTACCATTTGTATAT
 
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rJMSF028H02+          CCTCTGTATCACCGCATATAGATTTTCACAATGTATTTTTATGCACCATTGTTTCAATGT
rJMSF009H24+          CCTCTGTATCACCGCATATAGATTTTCACAATGTATTTTTATGCACCATTGTTTCAATGT
                      ____________________________________________________________
consensus             CCTCTGTATCACCGCATATAGATTTTCACAATGTATTTTTATGCACCATTGTTTCAATGT
 
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rJMSF028H02+          TCTCCTGTGAAAGAGCCCTATCTACCA-TTTCGCCTTCACTCTTCATGTTTTTGGTTTTT
rJMSF009H24+          TCTCCTGTGAAAGAGCCCTATCTACCATTTTCGCCTTCACTCTTCATGTTTTTGGTTTTT
                      ____________________________________________________________
consensus             TCTCCTGTGAAAGAGCCCTATCTACCATTTTCGCCTTCACTCTTCATGTTTTTGGTTTTT
 
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rJMSF028H02+          GTCGAGTGCGCAGTAGCGTTTAGGAGTTCTCAGTTACGTTTCTTGAATTTTGTATTGTA 
rJMSF009H24+          GTCGAGTGCGCAGTAGCGTTTAGGAGTTCTCAGTTACGTTTCTTGAATTTTGTATTGTAC
                      ____________________________________________________________
consensus             GTCGAGTGCGCAGTAGCGTTTAGGAGTTCTCAGTTACGTTTCTTGAATTTTGTATTGTAC