Contig 011258:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS079G03-                                              CATCTCAACACTATTATCCAGAACC
                      ____________________________________________________________
consensus                                                CATCTCAACACTATTATCCAGAACC
 
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JMFS079G03-           GTCATCACAGTTCACATCAAATGTTCCTAACCATCAATATTCTGAAAATTATCAACATCC
                      ____________________________________________________________
consensus             GTCATCACAGTTCACATCAAATGTTCCTAACCATCAATATTCTGAAAATTATCAACATCC
 
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JMFS079G03-           TCTTGGTGCTTCATACATGGGTTATACTCATCCTACCCCCTACCAACCGGCTCCCCAGCC
                      ____________________________________________________________
consensus             TCTTGGTGCTTCATACATGGGTTATACTCATCCTACCCCCTACCAACCGGCTCCCCAGCC
 
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JMFS079G03-           AAGTGTCCTACAACCAAATTTTTTTACTCCAACTCCTATAGTTTCTGAGGGTAATGTAGC
                      ____________________________________________________________
consensus             AAGTGTCCTACAACCAAATTTTTTTACTCCAACTCCTATAGTTTCTGAGGGTAATGTAGC
 
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JMFS079G03-           TCCACCACCTGTGGCTCCTCAACCCACTTCAGCTGTGAAATTCAATCCAACCAATCCTCC
                      ____________________________________________________________
consensus             TCCACCACCTGTGGCTCCTCAACCCACTTCAGCTGTGAAATTCAATCCAACCAATCCTCC
 
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JMFS079G03-           TGCTTTGAGAAATGTGGGAAAATATCAGCAGCCTACCTTGGGCGCCCATTTGTATCCTGG
                      ____________________________________________________________
consensus             TGCTTTGAGAAATGTGGGAAAATATCAGCAGCCTACCTTGGGCGCCCATTTGTATCCTGG
 
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JMFS079G03-           GCCTGCTAACCCTAGCTTCTCTGCCAGTCCCAATCTGCCTGGTTCCTATGGTGCCGACCC
                      ____________________________________________________________
consensus             GCCTGCTAACCCTAGCTTCTCTGCCAGTCCCAATCTGCCTGGTTCCTATGGTGCCGACCC
 
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JMFS079G03-           ATCTCAGGTCAATAATATGCCTCCGGTTATTGCACCATCCCAAAATTCTAGAGGATTTAC
                      ____________________________________________________________
consensus             ATCTCAGGTCAATAATATGCCTCCGGTTATTGCACCATCCCAAAATTCTAGAGGATTTAC
 
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JMFS079G03-           TCCTGTTAATAATCCTGGATTTCCGAGACCCACTATGAGTCCTATGCAACCTCCCAGCCC
rJMSF017L05+                                                     ATGCAACCTCCCAGCCC
                      ____________________________________________________________
consensus             TCCTGTTAATAATCCTGGATTTCCGAGACCCACTATGAGTCCTATGCAACCTCCCAGCCC
 
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JMFS079G03-           TGTTCAAACAGCACCTGTCCAACCATCTTTTACTTCAGCTGCTCCCCCACCTACAGTGCA
rJMSF017L05+          TGTTCAAACAGCACCTGTCCAACCATCTTTTACTTCAGCTGCTCCCCCACCTACAGTGCA
rJMSF003D16+                                                    TCCCCCACCTACAGTGCA
rJMSF009F04+                                                           CCTACAGTGCA
                      ____________________________________________________________
consensus             TGTTCAAACAGCACCTGTCCAACCATCTTTTACTTCAGCTGCTCCCCCACCTACAGTGCA
 
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JMFS079G03-           GACAGTTGATACTTCTAATGTGCCAGCTCAGCANAAGCCCGTTGTAATGACTTTGACA  
rJMSF017L05+          GACAGTTGATACTTCTAATGTGCCAGCTCAGCAAAAGCCCGTTGTAATGACTTTGACAAG
rJMSF003D16+          GACAGTTGATACTTCTAATGTGCCAGCTCAGCAAAAGCCCGTTGTAATGACTTTGACAAG
rJMSF009F04+          GACAGTTGATACTTCTAATGTGCCAGCTCAGCAAAAGCCCGTTGTAATGACTTTGACAAG
                      ____________________________________________________________
consensus             GACAGTTGATACTTCTAATGTGCCAGCTCAGCAAAAGCCCGTTGTAATGACTTTGACAAG
 
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rJMSF017L05+          ACTCTTCAACGAGACATCACAAGCCTTAGGAGGATCACGAGCAAATCCAGCTAAGAAACG
rJMSF003D16+          ACTCTTCAACGAGACATCACAAGCCTTAGGAGGATCACGAGCAAATCCAGCTAAGAAACG
rJMSF009F04+          ACTCTTCAACGAGACATCACAAGCCTTAGGAGGATCACGAGCAAATCCAGCTAAGAAACG
                      ____________________________________________________________
consensus             ACTCTTCAACGAGACATCACAAGCCTTAGGAGGATCACGAGCAAATCCAGCTAAGAAACG
 
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rJMSF017L05+          CGAGATTGAGGATAACTCAAAGAAGTTGGGCGCCTTGTTTGCTAAACTCAATAGCGGAGA
rJMSF003D16+          CGAGATTGAGGATAACTCAAAGAAGTTGGGCGCCTTGTTTGCTAAACTCAATAGCGGAGA
rJMSF009F04+          CGAGATTGAGGATAACTCAAAGAAGTTGGGCGCCTTGTTTGCTAAACTCAATAGCGGAGA
                      ____________________________________________________________
consensus             CGAGATTGAGGATAACTCAAAGAAGTTGGGCGCCTTGTTTGCTAAACTCAATAGCGGAGA
 
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rJMSF017L05+          CATATCTAAGAACGCCTCAGAAAAGCTCATTCAGCTTTGTCAGGCTTTGGACAATGGTGA
rJMSF003D16+          CATATCTAAGAACGCCTCAGAAAAGCTCATTCAGCTTTGTCAGGCTTTGGACAATGGTGA
rJMSF009F04+          CATATCTAAGAACGCCTCAGAAAAGCTCATTCAGCTTTGTCAGGCTTTGGACAATGGTGA
                      ____________________________________________________________
consensus             CATATCTAAGAACGCCTCAGAAAAGCTCATTCAGCTTTGTCAGGCTTTGGACAATGGTGA
 
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rJMSF017L05+          CTTCAGTACTGCCCTTCAAATTCAGATTCATCTCACGACAAGCGATTGGGACGAGTGCAA
rJMSF003D16+          CTTCAGTACTGCCCTTCAAATTCAGATTCATCTCACGACAAGCGATTGGGACGAGTGCAA
rJMSF009F04+          CTTCAGTACTGCCCTTCAAATTCAGATTCATCTCACGACAAGCGATTGGGACGAGTGCAA
                      ____________________________________________________________
consensus             CTTCAGTACTGCCCTTCAAATTCAGATTCATCTCACGACAAGCGATTGGGACGAGTGCAA
 
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rJMSF017L05+          CTTTTGGCTTGCTACACTGAAGCGAATGATCAAGAGCAGGCAGAGCTTTAGATGATTGAT
rJMSF003D16+          CTTTTGGCTTGCTACACTGAAGCGAATGATCAAGAGCAGGCAGAGCTTTAGATGATTGAT
rJMSF009F04+          CTTTTGGCTTGCTACACTGAAGCGAATGATCAAGAGCAGGCAGAGCTTTAGATGATTGAT
                      ____________________________________________________________
consensus             CTTTTGGCTTGCTACACTGAAGCGAATGATCAAGAGCAGGCAGAGCTTTAGATGATTGAT
 
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rJMSF017L05+          AATTAGATTCTCTTTTGAATCTTTTACCAATCATTGGTTTGTGGGAGTGGGCCCATATCT
rJMSF003D16+          AATTAGATTCTCTTTTGAATCTTTTACCAATCATTGGTTTGTGGGAGTGGGCCCATATCT
rJMSF009F04+          AATTAGATTCTCTTTTGAATCTTTTACCAATCATTGGTTTGTGGGAGTGGGCCCATATCT
                      ____________________________________________________________
consensus             AATTAGATTCTCTTTTGAATCTTTTACCAATCATTGGTTTGTGGGAGTGGGCCCATATCT
 
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rJMSF017L05+          TCATCTGTGTGTACACAAGTATTGCATTCAAATTGATTGTGGAGTTTTCTCATGCCATCT
rJMSF003D16+          TCATCTGTGTGTACACAAGTATTGCATTCAAATTGATTGTGGAGTTTTCTCATGCCATCT
rJMSF009F04+          TCATCTGTGTGTACACAAGTATTGCATTCAAATTGATTGTGGAGTTTTCTCATGCCATCT
                      ____________________________________________________________
consensus             TCATCTGTGTGTACACAAGTATTGCATTCAAATTGATTGTGGAGTTTTCTCATGCCATCT
 
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rJMSF017L05+          TCCTCTTTTCACCCAATCTGTATTGACTGCCAGTGTTAATTTTTTTTAGAAGGGGAGTAG
rJMSF003D16+          TCCTCTTTTCACCCAATCTGTATTGACTGCCAGTGTTAA-TTTTTTTAGAAGGGGAGTAG
rJMSF009F04+          TCCTCTTTTCACCCAATCTGTATTGACTGCCAGTGTTAATTTTTTTTAGAAGGGGAGTAG
                      ____________________________________________________________
consensus             TCCTCTTTTCACCCAATCTGTATTGACTGCCAGTGTTAATTTTTTTTAGAAGGGGAGTAG
 
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rJMSF017L05+          TATATACTATATAGTCTAGACAGACAATTTGATTGC-TTTTTTTCCTTTATAGTATGTAG
rJMSF003D16+          TATATACTATATAGTCTAGACAGACAATTTGATTGCTTTTTTTTCCTTTATAGTATGTAG
rJMSF009F04+          TATATACTATATAGTCTAGACAGACAATTTGATTGCTTTTTTTTCCTTTATAGTATGTAG
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consensus             TATATACTATATAGTCTAGACAGACAATTTGATTGCTTTTTTTTCCTTTATAGTATGTAG
 
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rJMSF017L05+          TGTTGAAAATATAGCATTTTT                                       
rJMSF003D16+          TGTTGAAAATATAGCATTTTTTGTTCCCAAAATACATATTTTATGT              
rJMSF009F04+          TGTTGAAAATATAGCATTTTTTGTTCCCAAAATACATATTTTATGTTGTAATTCATGAGT
                      ____________________________________________________________
consensus             TGTTGAAAATATAGCATTTTTTGTTCCCAAAATACATATTTTATGTTGTAATTCATGAGT
 
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rJMSF009F04+          GAAGAAATTGTGACCATAGGCCCCTTAATTGGACTGTTGTTTTCTTAATGATTGTTGAAT
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consensus             GAAGAAATTGTGACCATAGGCCCCTTAATTGGACTGTTGTTTTCTTAATGATTGTTGAAT