Contig 011257:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009D19Sequence347011257 (6)gb|EYU19586.1|2e-16hypothetical protein MIMGU_mgv1a008466mg [Erythranthe guttata]785011257 (6)ref|XP_006360193.1|2e-116PREDICTED: uncharacterized protein P11E10.01-like [Solanum tuberosum]
JMSF035L19Sequence614011257 (6)ref|XP_006360193.1|1e-68PREDICTED: uncharacterized protein P11E10.01-like [Solanum tuberosum]705011257 (6)ref|XP_006360193.1|5e-104PREDICTED: uncharacterized protein P11E10.01-like [Solanum tuberosum]
JMSF040H07Sequence613011257 (6)ref|XP_006360193.1|4e-68PREDICTED: uncharacterized protein P11E10.01-like [Solanum tuberosum]806011257 (6)ref|XP_006360193.1|3e-127PREDICTED: uncharacterized protein P11E10.01-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF009D19-                         GGTAGCCAACCAAATACTACTATACTAGCAATCAATAAGTCCTCTT
JMSF040H07-                            AGCCAACCAAATACTACTATACTAGCAATCAATAAGTCCTCTT
JMSF035L19-                            AGCCAACCAAATACTACTATACTAGCAATCAATAAGTCCTCTT
                      ____________________________________________________________
consensus                           GGTAGCCAACCAAATACTACTATACTAGCAATCAATAAGTCCTCTT
 
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JMSF009D19-           AAAAATCTTAATGGCGATCAACGGAGACAAAGCCAATCCCACTTCCGCCGCCGCGGCGCC
JMSF040H07-           AAAAATCTTAATGGCGATCAACGGAGACAAAGCCAATCCCACTTCCGCCGCCGCGGCGCC
JMSF035L19-           AAAAATCTTAATGGCGATCAACGGAGACAAAGCCAATCCCACTTCCGCCGCCGCGGCGCC
                      ____________________________________________________________
consensus             AAAAATCTTAATGGCGATCAACGGAGACAAAGCCAATCCCACTTCCGCCGCCGCGGCGCC
 
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JMSF009D19-           ACCGACGGTCTTCATCTCCACCGCCACTCTCCGCCGTCTCCTCACGCACGCCTCCCTCAT
JMSF040H07-           ACCGACGGTCTTCATCTCCACCGCCACTCTCCGCCGTCTCCTCACGCACGCCTCCCTCAT
JMSF035L19-           ACCGACGGTCTTCATCTCCACCGCCACTCTCCGCCGTCTCCTCACGCACGCCTCCCTCAT
                      ____________________________________________________________
consensus             ACCGACGGTCTTCATCTCCACCGCCACTCTCCGCCGTCTCCTCACGCACGCCTCCCTCAT
 
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JMSF009D19-           CCGCCACCTGCACTCCACCCTCTCCACCAACATCCAATCCCCCGTCCGCCACTCCCACGA
JMSF040H07-           CCGCCACCTGCACTCCACCCTCTCCACCAACATCCAATCCCCCGTCCGCCACTCCCACGA
JMSF035L19-           CCGCCACCTGCACTCCACCCTCTCCACCAACATCCAATCCCCCGTCCGCCACTCCCACGA
                      ____________________________________________________________
consensus             CCGCCACCTGCACTCCACCCTCTCCACCAACATCCAATCCCCCGTCCGCCACTCCCACGA
 
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JMSF009D19-           GACAACCCCTTCCTCCTCCCTCCTCCTCATGCCGTCCTGGTCTCTCTCCCCTTCCCTCCC
JMSF040H07-           GACAACCCCTTCCTCCTCCCTCCTCCTCATGCCGTCCTGGTCTCTCTCCCCTTCCCTCCC
JMSF035L19-           GACAACCCCTTCCTCCTCCCTCCTCCTCATGCCGTCCTGGTCTCTCTCCCCTTCCCTCCC
                      ____________________________________________________________
consensus             GACAACCCCTTCCTCCTCCCTCCTCCTCATGCCGTCCTGGTCTCTCTCCCCTTCCCTCCC
 
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JMSF009D19-           CTACGTCGGCGTCAAGTTAGTCACTCACCACCCCAATAACTCCGCCCTAAACCTCCCCGG
JMSF040H07-           CTACGTCGGCGTCAAGTTAGTCACCCACCACCCCAATAACTCCGCCCTAAACCTCCCCGG
JMSF035L19-           CTACGTCGGCGTCAAGTTAGTCACTCACCACCCCAATAACTCCGCCCTAAACCTCCCCGG
                      ____________________________________________________________
consensus             CTACGTCGGCGTCAAGTTAGTCACTCACCACCCCAATAACTCCGCCCTAAACCTCCCCGG
 
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JMSF009D19-           A                                                           
JMSF040H07-           AGTGCACGCAAGTTACGTGCTCTTCAACTCCCTCACCGGCCAAACCTTAGCCACCATGGA
JMSF035L19-           AGTGCACGCAAGTTACGTGCTCTTCAACTCCCTCACCGGCCAAACCTTAGCCACCATGGA
rJMSF040H07+                                          TCACCGGCCAAACCTTAGCCACCATGGA
                      ____________________________________________________________
consensus             AGTGCACGCAAGTTACGTGCTCTTCAACTCCCTCACCGGCCAAACCTTAGCCACCATGGA
 
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JMSF040H07-           CGCCACCGAGCTAACCCTTTACCGCACTTCTTGCGTCTCAGCTTTAGCTTCCAAATTCTT
JMSF035L19-           CGCCACCGAGCTAACCCTTTACCGCACTTCTTGCGTCTCAGCTTTAGCTTCCAAATTCTT
rJMSF040H07+          CGCCACCGAGCTAACCCTTTACCGCACTTCTTGCGTCTCAGCTTTAGCTTCCAAATTCTT
rJMSF009D19+                            TTACCGCACTTCTTGCGTCTCAGCTTTAGCTTCCAAATTCTT
                      ____________________________________________________________
consensus             CGCCACCGAGCTAACCCTTTACCGCACTTCTTGCGTCTCAGCTTTAGCTTCCAAATTCTT
 
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JMSF040H07-           GTCGAGGGAAAACTCCGAGACCCTTGTAATGATCGGGGCTGGTTCTTTAGCCCCGCATTT
JMSF035L19-           GTCGAGGGAAAACTCCGAGACCCTTGTAATGATCGGGGCTGGTTCTTTAGCCCCGCATTT
rJMSF040H07+          GTCGAGGGAAAACTCCGAGACCCTTGTAATGATCGGGGCTGGTTCTTTAGCCCCGCATTT
rJMSF035L19+                        CCGAGACCCTTGTAATGATCGGGGCTGGTTCTTTAGCCCCGCATTT
rJMSF009D19+          GTCGAGGGAAAACTCCGAGACCCTTGTAATGATCGGGGCTGGTTCTTTAGCCCCGCATTT
                      ____________________________________________________________
consensus             GTCGAGGGAAAACTCCGAGACCCTTGTAATGATCGGGGCTGGTTCTTTAGCCCCGCATTT
 
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JMSF040H07-           GATCAGGGCCCACCTGGCTGTCCGGCCAGGGTTGAAGAGAGTGATAATCTGGAACAGAAC
JMSF035L19-           GATCAGGGCCCACCTGGCTGTCCGGCCAGGGTTGAAGAGAGTGATAATCTGGAACAGAAC
rJMSF040H07+          GATCAGGGCCCACCTGGCTGTCCGGCCAGGGTTGAAGAGAGTGATAATCTGGAACAGAAC
rJMSF035L19+          GATCAGGGCCCACCTGGCTGTCCGGCCAGGGTTGAAGAGAGTGATAATCTGGAACAGAAC
rJMSF009D19+          GATCAGGGCCCACCTGGCTGTCCGGCCAGGGTTGAAGAGAGTGATAATCTGGAACAGAAC
                      ____________________________________________________________
consensus             GATCAGGGCCCACCTGGCTGTCCGGCCAGGGTTGAAGAGAGTGATAATCTGGAACAGAAC
 
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JMSF040H07-           TGTTGGAAAGGCACAATCTTTGGCTGA                                 
JMSF035L19-           TGTTGGAAAGGCACAATCTTTGGCTGAG                                
rJMSF040H07+          TGTTGGAAAGGCACAATCTTTGGCTGAGAAGTTGCAAAATGAGAGCGGATTTGAGGGGGT
rJMSF035L19+          TGTTGGAAAGGCACAATCTTTGGCTGAGAAGTTGCAAAATGAGAGCGGATTTGAGGGGGT
rJMSF009D19+          TGTTGGAAAGGCACAATCTTTGGCTGAGAAGTTGCAAAATGAGAGCGGATTTGAGGGGGT
                      ____________________________________________________________
consensus             TGTTGGAAAGGCACAATCTTTGGCTGAGAAGTTGCAAAATGAGAGCGGATTTGAGGGGGT
 
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rJMSF040H07+          GATTCTGGAGAGCAATGGGAGTTTGGAGGGGGTGGTGGGGTTGGGAGATATAGTGAGCTG
rJMSF035L19+          GATTCTGGAGAGCAATGGGAGTTTGGAGGGGGTGGTGGGGTTGGGAGATATAGTGAGCTG
rJMSF009D19+          GATTCTGGAGAGCAATGGGAGTTTGGAGGGGGTGGTGGGGTTGGGAGATATAGTGAGCTG
                      ____________________________________________________________
consensus             GATTCTGGAGAGCAATGGGAGTTTGGAGGGGGTGGTGGGGTTGGGAGATATAGTGAGCTG
 
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rJMSF040H07+          TGCCACAAACTCAGAGACTCCATTGGTGAAGGGGGGAGAATTGAAGGAAGGAGCACATTT
rJMSF035L19+          TGCCACAAACTCAGAGACTCCATTGGTGAAGGGGGGAGAATTGAAGGAAGGAGCACATTT
rJMSF009D19+          TGCCACAAACTCAGAGACTCCATTGGTGAAGGGGGGAGAATTGAAGGAAGGAGCACATTT
                      ____________________________________________________________
consensus             TGCCACAAACTCAGAGACTCCATTGGTGAAGGGGGGAGAATTGAAGGAAGGAGCACATTT
 
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rJMSF040H07+          GGACTTGGTGGGATCCTTCAAGCCGTCTATGAAGGAATGCGACGACGAGGCAATCAAGAA
rJMSF035L19+          GGACTTGGTGGGATCCTTCAAGCCGTCTATGAAGGAATGCGACGACGAGGCAATCAAGAA
rJMSF009D19+          GGACTTGGTGGGATCCTTCAAGCCGTCTATGAAGGAATGCGACGACGAGGCAATCAAGAA
                      ____________________________________________________________
consensus             GGACTTGGTGGGATCCTTCAAGCCGTCTATGAAGGAATGCGACGACGAGGCAATCAAGAA
 
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rJMSF040H07+          GGGGAGAGTGTTTATAGATAACGAGGCGGCTTTGGTCGAATCTGGGGAGTTAGTGGGAGC
rJMSF035L19+          GGGGAGAGTGTTTATAGATAACGAGGCGGCTTTGGTTGAATCTGGGGAGTTAGTGGGAGC
rJMSF009D19+          GGGGAGAGTGTTTATAGATAACGAGGCGGCTTTGGTTGAATCTGGGGAGTTAGTGGGAGC
                      ____________________________________________________________
consensus             GGGGAGAGTGTTTATAGATAACGAGGCGGCTTTGGTTGAATCTGGGGAGTTAGTGGGAGC
 
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rJMSF040H07+          ATTTGAGAGAGGTGTGATCACAAGAGATGATATAAGAGGAGATTTAGTGGAGTTGATAAA
rJMSF035L19+          ATTTGAGAGAGGTGTGATCACAAGAGATGATATAAGAGGAGATTTAGTGGAGTTGATAAA
rJMSF009D19+          ATTTGAGAGAGGTGTGATCACAAGAGATGATATAAGAGGAGATTTAGTGGAGTTGATAAA
                      ____________________________________________________________
consensus             ATTTGAGAGAGGTGTGATCACAAGAGATGATATAAGAGGAGATTTAGTGGAGTTGATAAA
 
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rJMSF040H07+          GGGAGAAAAGAATGGGAGGAAGAGCCAAGAAGAAACCACTGTGTTCAAATCAGTTGGGTC
rJMSF035L19+          GGGAGAAAAGAATGGGAGGAAGAGCCAAGAAGAAACCACTGTGTTCAAATCAGTTGGGTC
rJMSF009D19+          GGGAGAAAAGAATGGGAGGAAGAGCCAAGAAGAAACCACTGTGTTCAAATCAGTTGGGTC
                      ____________________________________________________________
consensus             GGGAGAAAAGAATGGGAGGAAGAGCCAAGAAGAAACCACTGTGTTCAAATCAGTTGGGTC
 
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rJMSF040H07+          TGCTGCTGTGGATCTTCTCACTGCTCAGTTGGTTTATGAAACCTGCATAAAAAATCAAGT
rJMSF035L19+          TGCTGCTGTGGATCTTCTCACTGCTCAGTTGGTTTATGAAACCTGCATAAAAAATCAAGT
rJMSF009D19+          TGCTGCTGTGGATCTTCTCACTGCTCAGTTGGTTTATGAAACCTGCATAAAAAATCAAGT
                      ____________________________________________________________
consensus             TGCTGCTGTGGATCTTCTCACTGCTCAGTTGGTTTATGAAACCTGCATAAAAAATCAAGT
 
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rJMSF040H07+          TCATGGATGAACTAACTTCTGCTCTTTTCCTGCATTTTTTCTCTCTTCTGTTCATGTATC
rJMSF035L19+          TCATGGATGAACTAACTTCTGCTCTTTTCCTGCATTTTTTCTCTCTTCTGTTCATGTATC
rJMSF009D19+          TCATGGATGAACTAACTTCTGCTCTTTTCCTGCATTTTTTCTCTCTTCTGTTCATGTATC
                      ____________________________________________________________
consensus             TCATGGATGAACTAACTTCTGCTCTTTTCCTGCATTTTTTCTCTCTTCTGTTCATGTATC
 
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rJMSF040H07+          TGCAGTTTCAATTTTCCAATACAAATAAAAAGGCAATATAATGTCATTCTCAGTGAAC  
rJMSF035L19+          TGCAGTTTCAATTTTCCAATACAAATAAAAAGGCAATATAATGTCATTCTCAGTGAAC  
rJMSF009D19+          TGCAGTTTCAATTTTCCAATACAAATAAAAAGGCAATATAATGTCATTCTCAGTGAACTG
                      ____________________________________________________________
consensus             TGCAGTTTCAATTTTCCAATACAAATAAAAAGGCAATATAATGTCATTCTCAGTGAACTG