Contig 011248:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007J15Sequence267019912770011248 (2)ref|XP_009630581.1|5e-38PREDICTED: protein NSP-INTERACTING KINASE 1 [Nicotiana tomentosiformis]
JMSF013E10Sequence251003806 (3)ref|XP_002532890.1|3e-25BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative 700011248 (2)ref|XP_009630581.1|6e-70PREDICTED: protein NSP-INTERACTING KINASE 1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007J15+                    AAGAGAAGAAACTCGATGGACTCGTTGACAAAGATTGAAAGACAAGTATG
                      ____________________________________________________________
consensus                       AAGAGAAGAAACTCGATGGACTCGTTGACAAAGATTGAAAGACAAGTATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013E10+              GATTGAGCTAGAGGAAATGGTTCAAGTTGCTTTGCTATGCACACAATACCTTCCGG
rJMSF007J15+          ACGAGATTGAGCTAGAGGAAATGGTTCAAGTTGCTTTGCTATGCACACAATACCTTCCGG
                      ____________________________________________________________
consensus             ACGAGATTGAGCTAGAGGAAATGGTTCAAGTTGCTTTGCTATGCACACAATACCTTCCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013E10+          GCCACAGGCCGAAGATGTCTGAAGTTGTTCGAATGCTGGAAGGCGACGGGCTTGCAGAGA
rJMSF007J15+          GCCACAGGCCGAAGATGTCTGAAGTTGTTCGAATGCTGGAAGGCGACGGGCTTGCAGAGA
                      ____________________________________________________________
consensus             GCCACAGGCCGAAGATGTCTGAAGTTGTTCGAATGCTGGAAGGCGACGGGCTTGCAGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013E10+          GGTGGGAAGCGTCCCAGAAAACCGAACAGCCAAACCACAAGTACGGAGCACAGGCGCTCT
rJMSF007J15+          GGTGGGAAGCGTCCCAGAAAACCGAACAGCCAAACCACAAGTACGGAGCACAGGCGCTCT
                      ____________________________________________________________
consensus             GGTGGGAAGCGTCCCAGAAAACCGAACAGCCAAACCACAAGTACGGAGCACAGGCGCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013E10+          CGTCTTCAGAACGGTTTTCAGATCTCACCGACGACTCTTCAGTGCTTGCACAAGCCATAG
rJMSF007J15+          CGTCTTCAGAACGGTTTTCAGATCTCACCGACGACTCTTCAGTGCTTGCACAAGCCATAG
                      ____________________________________________________________
consensus             CGTCTTCAGAACGGTTTTCAGATCTCACCGACGACTCTTCAGTGCTTGCACAAGCCATAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013E10+          AGCTGTCGGGTCCAAGGTGAGCTGAAATGTGAGTTTAGTACATAGCACAAGAACCGGGTT
rJMSF007J15+          AGCTGTCGGGTCCAAGGTGAGCTGAAATGTGAGTTTAGTACATAGCACAAGAACCGGGTT
                      ____________________________________________________________
consensus             AGCTGTCGGGTCCAAGGTGAGCTGAAATGTGAGTTTAGTACATAGCACAAGAACCGGGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013E10+          TGTACAAGGCAAAAAGTATATATGGCCCGAGGTTTCGATCTGCCTAGATTTTATGGTGTA
rJMSF007J15+          TGTACAAGGCAAAAAGTATATATGGCCCGAGGTTTCGATCTGCCTAGATTTTATGGTGTA
                      ____________________________________________________________
consensus             TGTACAAGGCAAAAAGTATATATGGCCCGAGGTTTCGATCTGCCTAGATTTTATGGTGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013E10+          TAGCAGTGGAACATATATATATCAAGGGTTCAAAGAGCTTTTGGTGTAGTTTCTTGAGGA
rJMSF007J15+          TAGCAGTGGAACATATATATATCAAGGGTTCAAAGAGCTTTTGGTGTAGTTTCTTGAGGA
                      ____________________________________________________________
consensus             TAGCAGTGGAACATATATATATCAAGGGTTCAAAGAGCTTTTGGTGTAGTTTCTTGAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013E10+          TGAGAAGTTAGGTAACTTTCAACTGTCTGGTCTCAAACCCATTGTACACTTTGCAAGAGA
rJMSF007J15+          TGAGAAGTTAGGTAACTTTCAACTGTCTGGTCTCAAACCCATTGTACACTTTGCAAGAGA
                      ____________________________________________________________
consensus             TGAGAAGTTAGGTAACTTTCAACTGTCTGGTCTCAAACCCATTGTACACTTTGCAAGAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF013E10+          GCACAAAAGGGAAAAAATGCCA                                      
rJMSF007J15+          GCACAAAAGGGAAAAAATGCCATTTTGTTTTCAATGAGATGATGACAAAGTTTTAATTAG
                      ____________________________________________________________
consensus             GCACAAAAGGGAAAAAATGCCATTTTGTTTTCAATGAGATGATGACAAAGTTTTAATTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007J15+          TGCCAAAGTGTTCAAGGCTAATGTGTATGTATGAAGAGTTGGTAGATTAGATTCATGTAT
                      ____________________________________________________________
consensus             TGCCAAAGTGTTCAAGGCTAATGTGTATGTATGAAGAGTTGGTAGATTAGATTCATGTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007J15+          ATATGTATGTGGGTGGATGGGCCTGCAAAGTATCGTTTCAGTCTCGAGTTGTTTTTTTAG
                      ____________________________________________________________
consensus             ATATGTATGTGGGTGGATGGGCCTGCAAAGTATCGTTTCAGTCTCGAGTTGTTTTTTTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007J15+          ATTGATAAACTTCTTGTAGTATAAAATTTATGTACTTTGTATCCATTAAAGTTGAAAAAA
                      ____________________________________________________________
consensus             ATTGATAAACTTCTTGTAGTATAAAATTTATGTACTTTGTATCCATTAAAGTTGAAAAAA