Contig 011241:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF003M23+                                GAACGAGAACGAGAAAGAGGCGGAGGAGGAGGCGGTGA
                      ____________________________________________________________
consensus                                   GAACGAGAACGAGAAAGAGGCGGAGGAGGAGGCGGTGA
 
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rJMSF003M23+          TGGTGGTAGANGCAGTGCCCCTTCATCNTNCCGGCCACCCAAATCTGGAAGGTTTTCTGG
                      ____________________________________________________________
consensus             TGGTGGTAGANGCAGTGCCCCTTCATCNTNCCGGCCACCCAAATCTGGAAGGTTTTCTGG
 
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rJMSF003M23+          TGNTTCAGCCCCTGCCTACCCTAGAAATCCTCGAGCACATTTGCCCCCACCACACCTGTC
                      ____________________________________________________________
consensus             TGNTTCAGCCCCTGCCTACCCTAGAAATCCTCGAGCACATTTGCCCCCACCACACCTGTC
 
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rJMSF003M23+          CAGATATTCCGGACCATATGGTTATCCAAACCACCAACCCATATACGGCATGTCCCCCCC
                      ____________________________________________________________
consensus             CAGATATTCCGGACCATATGGTTATCCAAACCACCAACCCATATACGGCATGTCCCCCCC
 
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rJMSF003M23+          TCTGCATATGGACCACTATATAATGAAACTCGTGCACAGAGCCACGCAGCCCACGCTGCA
                      ____________________________________________________________
consensus             TCTGCATATGGACCACTATATAATGAAACTCGTGCACAGAGCCACGCAGCCCACGCTGCA
 
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rJMSF003M23+          TATTCTCAACAGTATGGATATTCTACTCCCGATGTCGCAACCGGTCCACCAAGGGGTGCT
                      ____________________________________________________________
consensus             TATTCTCAACAGTATGGATATTCTACTCCCGATGTCGCAACCGGTCCACCAAGGGGTGCT
 
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rJMSF005M21+                                                   ACAGTATGGGTATTNTGCT
rJMSF003M23+          CCACATTACGCAGAAGGAGCACAAGCACCAGGAACCTATGAACAGTATGGGTATTCTGCT
                      ____________________________________________________________
consensus             CCACATTACGCAGAAGGAGCACAAGCACCAGGAACCTATGAACAGTATGGGTATTCTGCT
 
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rJMSF005M21+          CCGGATGCCACAACCGGTGCANTACACACTGGTCCACACTATGTAGCGCAAGCGCAGATA
rJMSF003M23+          CCGGATGCCACAACCGGTGCACTACACACTGGTCCACACTATGTAGCGCAAGCGCAGATA
                      ____________________________________________________________
consensus             CCGGATGCCACAACCGGTGCACTACACACTGGTCCACACTATGTAGCGCAAGCGCAGATA
 
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rJMSF005M21+          AACTACGGGGGAAGTCCAGCTGCACCTTCTCAACAACAATACATGTATTCTCCTCAGGAC
rJMSF003M23+          AACTACGGGGGAAGTCCAGCTGCACCTTCTCAACAACAATACATGTATTCTCCTCAGGAC
                      ____________________________________________________________
consensus             AACTACGGGGGAAGTCCAGCTGCACCTTCTCAACAACAATACATGTATTCTCCTCAGGAC
 
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rJMSF005M21+          GCACCAGGCGTGGCTAGTCATGAAGCAGCACCAGGATCGTATGGAGGGCCGAGTGATTAT
rJMSF003M23+          GCACCAGGCGTGGCTAGTCATGAAGCAGCACCAGGATCGTATGGAGGGCCGAGTGATTAT
                      ____________________________________________________________
consensus             GCACCAGGCGTGGCTAGTCATGAAGCAGCACCAGGATCGTATGGAGGGCCGAGTGATTAT
 
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rJMSF005M21+          GCTACATATGATTATAGTGCTGCGGCCGCTGCAGCTGCAGGTGCAACTGCAACTGCAGCT
rJMSF003M23+          GCTACATATGATTATAGTGCTGCGGCCGCTGCAGCTGCAGGTGCAACTGCAACTGCAGCT
                      ____________________________________________________________
consensus             GCTACATATGATTATAGTGCTGCGGCCGCTGCAGCTGCAGGTGCAACTGCAACTGCAGCT
 
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rJMSF005M21+          GCATACCCCCCAAGTTCATACCAAACACAGTAGTCTAGAGTACACAGGGCCAAGATGATA
rJMSF003M23+          GCATACCCCCCAAGTTCATACCAAACACAGTAGTCTAGAGTACACAGGGCCAAGATGATA
                      ____________________________________________________________
consensus             GCATACCCCCCAAGTTCATACCAAACACAGTAGTCTAGAGTACACAGGGCCAAGATGATA
 
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rJMSF005M21+          TTTAGCTACTTGTGTTCTGCTGCTAATGTTCTGCTGTTCCATAAAGTGCCCCAT      
rJMSF003M23+          TTTAGCTACTTGTGTTCTGCTGCTAATGTTCTGCTGTTCCATAAAGTGCCCCATGTCTTT
                      ____________________________________________________________
consensus             TTTAGCTACTTGTGTTCTGCTGCTAATGTTCTGCTGTTCCATAAAGTGCCCCATGTCTTT