Contig 011241:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003M23Sequence357006382 (4)ref|XP_009766201.1|2e-26PREDICTED: FRIGIDA-like protein 4a [Nicotiana sylvestris]758011241 (2)
JMSF005M21Sequence319006382 (4)ref|XP_009766201.1|3e-23PREDICTED: FRIGIDA-like protein 4a [Nicotiana sylvestris]373011241 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF003M23+ GAACGAGAACGAGAAAGAGGCGGAGGAGGAGGCGGTGA
                      ____________________________________________________________
consensus GAACGAGAACGAGAAAGAGGCGGAGGAGGAGGCGGTGA
 
. : . : . : . : . : . :
rJMSF003M23+ TGGTGGTAGANGCAGTGCCCCTTCATCNTNCCGGCCACCCAAATCTGGAAGGTTTTCTGG
                      ____________________________________________________________
consensus TGGTGGTAGANGCAGTGCCCCTTCATCNTNCCGGCCACCCAAATCTGGAAGGTTTTCTGG
 
. : . : . : . : . : . :
rJMSF003M23+ TGNTTCAGCCCCTGCCTACCCTAGAAATCCTCGAGCACATTTGCCCCCACCACACCTGTC
                      ____________________________________________________________
consensus TGNTTCAGCCCCTGCCTACCCTAGAAATCCTCGAGCACATTTGCCCCCACCACACCTGTC
 
. : . : . : . : . : . :
rJMSF003M23+ CAGATATTCCGGACCATATGGTTATCCAAACCACCAACCCATATACGGCATGTCCCCCCC
                      ____________________________________________________________
consensus CAGATATTCCGGACCATATGGTTATCCAAACCACCAACCCATATACGGCATGTCCCCCCC
 
. : . : . : . : . : . :
rJMSF003M23+ TCTGCATATGGACCACTATATAATGAAACTCGTGCACAGAGCCACGCAGCCCACGCTGCA
                      ____________________________________________________________
consensus TCTGCATATGGACCACTATATAATGAAACTCGTGCACAGAGCCACGCAGCCCACGCTGCA
 
. : . : . : . : . : . :
rJMSF003M23+ TATTCTCAACAGTATGGATATTCTACTCCCGATGTCGCAACCGGTCCACCAAGGGGTGCT
                      ____________________________________________________________
consensus TATTCTCAACAGTATGGATATTCTACTCCCGATGTCGCAACCGGTCCACCAAGGGGTGCT
 
. : . : . : . : . : . :
rJMSF005M21+ ACAGTATGGGTATTNTGCT
rJMSF003M23+ CCACATTACGCAGAAGGAGCACAAGCACCAGGAACCTATGAACAGTATGGGTATTCTGCT
                      ____________________________________________________________
consensus CCACATTACGCAGAAGGAGCACAAGCACCAGGAACCTATGAACAGTATGGGTATTCTGCT
 
. : . : . : . : . : . :
rJMSF005M21+ CCGGATGCCACAACCGGTGCANTACACACTGGTCCACACTATGTAGCGCAAGCGCAGATA
rJMSF003M23+ CCGGATGCCACAACCGGTGCACTACACACTGGTCCACACTATGTAGCGCAAGCGCAGATA
                      ____________________________________________________________
consensus CCGGATGCCACAACCGGTGCACTACACACTGGTCCACACTATGTAGCGCAAGCGCAGATA
 
. : . : . : . : . : . :
rJMSF005M21+ AACTACGGGGGAAGTCCAGCTGCACCTTCTCAACAACAATACATGTATTCTCCTCAGGAC
rJMSF003M23+ AACTACGGGGGAAGTCCAGCTGCACCTTCTCAACAACAATACATGTATTCTCCTCAGGAC
                      ____________________________________________________________
consensus AACTACGGGGGAAGTCCAGCTGCACCTTCTCAACAACAATACATGTATTCTCCTCAGGAC
 
. : . : . : . : . : . :
rJMSF005M21+ GCACCAGGCGTGGCTAGTCATGAAGCAGCACCAGGATCGTATGGAGGGCCGAGTGATTAT
rJMSF003M23+ GCACCAGGCGTGGCTAGTCATGAAGCAGCACCAGGATCGTATGGAGGGCCGAGTGATTAT
                      ____________________________________________________________
consensus GCACCAGGCGTGGCTAGTCATGAAGCAGCACCAGGATCGTATGGAGGGCCGAGTGATTAT
 
. : . : . : . : . : . :
rJMSF005M21+ GCTACATATGATTATAGTGCTGCGGCCGCTGCAGCTGCAGGTGCAACTGCAACTGCAGCT
rJMSF003M23+ GCTACATATGATTATAGTGCTGCGGCCGCTGCAGCTGCAGGTGCAACTGCAACTGCAGCT
                      ____________________________________________________________
consensus GCTACATATGATTATAGTGCTGCGGCCGCTGCAGCTGCAGGTGCAACTGCAACTGCAGCT
 
. : . : . : . : . : . :
rJMSF005M21+ GCATACCCCCCAAGTTCATACCAAACACAGTAGTCTAGAGTACACAGGGCCAAGATGATA
rJMSF003M23+ GCATACCCCCCAAGTTCATACCAAACACAGTAGTCTAGAGTACACAGGGCCAAGATGATA
                      ____________________________________________________________
consensus GCATACCCCCCAAGTTCATACCAAACACAGTAGTCTAGAGTACACAGGGCCAAGATGATA
 
. : . : . : . : . : . :
rJMSF005M21+ TTTAGCTACTTGTGTTCTGCTGCTAATGTTCTGCTGTTCCATAAAGTGCCCCAT
rJMSF003M23+ TTTAGCTACTTGTGTTCTGCTGCTAATGTTCTGCTGTTCCATAAAGTGCCCCATGTCTTT
                      ____________________________________________________________
consensus TTTAGCTACTTGTGTTCTGCTGCTAATGTTCTGCTGTTCCATAAAGTGCCCCATGTCTTT